RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 PLB1Q6P1J6 1458 aa22.7■■□□□ 1.22
SLC27A1-201ENST00000252595 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
SLC27A1-201ENST00000252595 TSHZ2Q9NRE2 1034 aa22.68■■□□□ 1.22
SLC27A1-201ENST00000252595 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
SLC27A1-201ENST00000252595 B4GALNT3Q6L9W6 998 aa22.66■■□□□ 1.22
SLC27A1-201ENST00000252595 MAP3K1Q13233 1512 aa22.65■■□□□ 1.22
SLC27A1-201ENST00000252595 CUL7Q14999 1698 aa22.64■■□□□ 1.22
SLC27A1-201ENST00000252595 CARMIL2Q6F5E8 1435 aa22.64■■□□□ 1.22
SLC27A1-201ENST00000252595 THOC2Q8NI27 1593 aaKnown RBP22.62■■□□□ 1.21
SLC27A1-201ENST00000252595 CC2D1BQ5T0F9 858 aaKnown RBP22.61■■□□□ 1.21
SLC27A1-201ENST00000252595 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
SLC27A1-201ENST00000252595 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
SLC27A1-201ENST00000252595 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
SLC27A1-201ENST00000252595 MAGI3Q5TCQ9 1506 aa22.58■■□□□ 1.21
SLC27A1-201ENST00000252595 KIF7Q2M1P5 1343 aa22.57■■□□□ 1.2
SLC27A1-201ENST00000252595 PTPN23Q9H3S7 1636 aa22.57■■□□□ 1.2
SLC27A1-201ENST00000252595 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
SLC27A1-201ENST00000252595 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
SLC27A1-201ENST00000252595 PTPRGP23470 1445 aa22.55■■□□□ 1.2
SLC27A1-201ENST00000252595 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
SLC27A1-201ENST00000252595 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
SLC27A1-201ENST00000252595 ABCC5O15440 1437 aa22.52■■□□□ 1.19
SLC27A1-201ENST00000252595 DAPK1P53355 1430 aa22.52■■□□□ 1.19
SLC27A1-201ENST00000252595 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
SLC27A1-201ENST00000252595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
SLC27A1-201ENST00000252595 KIAA0586Q9BVV6 1533 aa22.49■■□□□ 1.19
SLC27A1-201ENST00000252595 CFAP43Q8NDM7 1665 aa22.48■■□□□ 1.19
SLC27A1-201ENST00000252595 CCDC7Q96M83 1385 aa22.48■■□□□ 1.19
SLC27A1-201ENST00000252595 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
SLC27A1-201ENST00000252595 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
SLC27A1-201ENST00000252595 USP47Q96K76 1375 aa22.46■■□□□ 1.19
SLC27A1-201ENST00000252595 ANKRD50Q9ULJ7 1429 aa22.45■■□□□ 1.18
SLC27A1-201ENST00000252595 HECW1Q76N89 1606 aa22.45■■□□□ 1.18
SLC27A1-201ENST00000252595 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
SLC27A1-201ENST00000252595 RBM19Q9Y4C8 960 aaKnown RBP22.43■■□□□ 1.18
SLC27A1-201ENST00000252595 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
SLC27A1-201ENST00000252595 NUP153P49790 1475 aaKnown RBP22.43■■□□□ 1.18
SLC27A1-201ENST00000252595 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 UGGT2Q9NYU1 1516 aa22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 AFAP1Q8N556 730 aa22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 ROCK2O75116 1388 aaKnown RBP22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 CCDC136Q96JN2 1154 aa22.42■■□□□ 1.18
SLC27A1-201ENST00000252595 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
SLC27A1-201ENST00000252595 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
SLC27A1-201ENST00000252595 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.18
SLC27A1-201ENST00000252595 KDM6BO15054 1643 aa22.39■■□□□ 1.18
SLC27A1-201ENST00000252595 TNNT2P45379 298 aaPredicted RBP22.39■■□□□ 1.17
SLC27A1-201ENST00000252595 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
SLC27A1-201ENST00000252595 KIF3BO15066 747 aa22.34■■□□□ 1.17
SLC27A1-201ENST00000252595 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
SLC27A1-201ENST00000252595 DISP1Q96F81 1524 aa22.33■■□□□ 1.17
SLC27A1-201ENST00000252595 GGT6Q6P531 493 aa22.33■■□□□ 1.17
SLC27A1-201ENST00000252595 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
SLC27A1-201ENST00000252595 NCOA1Q15788 1441 aa22.32■■□□□ 1.16
SLC27A1-201ENST00000252595 CAMSAP2Q08AD1 1489 aa22.32■■□□□ 1.16
SLC27A1-201ENST00000252595 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
SLC27A1-201ENST00000252595 SAMD9Q5K651 1589 aa22.31■■□□□ 1.16
SLC27A1-201ENST00000252595 CNTLNQ9NXG0 1405 aa22.31■■□□□ 1.16
SLC27A1-201ENST00000252595 SAFB2Q14151 953 aaKnown RBP eCLIP22.3■■□□□ 1.16
SLC27A1-201ENST00000252595 EFCAB2Q5VUJ9 269 aa22.3■■□□□ 1.16
SLC27A1-201ENST00000252595 C9orf84Q5VXU9 1444 aa22.29■■□□□ 1.16
SLC27A1-201ENST00000252595 GPATCH8Q9UKJ3 1502 aaKnown RBP22.28■■□□□ 1.16
SLC27A1-201ENST00000252595 WDR62O43379 1518 aa22.27■■□□□ 1.16
SLC27A1-201ENST00000252595 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
SLC27A1-201ENST00000252595 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
SLC27A1-201ENST00000252595 PPP4R2Q9NY27 417 aa22.26■■□□□ 1.15
SLC27A1-201ENST00000252595 PANK3Q9H999 370 aa22.25■■□□□ 1.15
SLC27A1-201ENST00000252595 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
SLC27A1-201ENST00000252595 SPAG9O60271 1321 aaKnown RBP22.24■■□□□ 1.15
SLC27A1-201ENST00000252595 KIAA1107Q9UPP5 1409 aa22.24■■□□□ 1.15
SLC27A1-201ENST00000252595 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
SLC27A1-201ENST00000252595 CCDC144AA2RUR9 1427 aa22.23■■□□□ 1.15
SLC27A1-201ENST00000252595 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
SLC27A1-201ENST00000252595 PLIN1O60240 522 aa22.22■■□□□ 1.15
SLC27A1-201ENST00000252595 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
SLC27A1-201ENST00000252595 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
SLC27A1-201ENST00000252595 ATP10BO94823 1461 aa22.21■■□□□ 1.15
SLC27A1-201ENST00000252595 NBR1Q14596 966 aa22.2■■□□□ 1.14
SLC27A1-201ENST00000252595 WDR43Q15061 677 aaKnown RBP eCLIP22.19■■□□□ 1.14
SLC27A1-201ENST00000252595 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
SLC27A1-201ENST00000252595 KIAA0556O60303 1618 aa22.19■■□□□ 1.14
SLC27A1-201ENST00000252595 ROCK1Q13464 1354 aa22.18■■□□□ 1.14
SLC27A1-201ENST00000252595 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
SLC27A1-201ENST00000252595 LRRIQ1Q96JM4 1722 aa22.18■■□□□ 1.14
SLC27A1-201ENST00000252595 TMF1P82094 1093 aa22.17■■□□□ 1.14
SLC27A1-201ENST00000252595 RAPGEF6Q8TEU7 1601 aa22.17■■□□□ 1.14
SLC27A1-201ENST00000252595 CCDC146Q8IYE0 955 aa22.16■■□□□ 1.14
SLC27A1-201ENST00000252595 CDCA7LQ96GN5 454 aa22.16■■□□□ 1.14
SLC27A1-201ENST00000252595 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
SLC27A1-201ENST00000252595 ARHGAP5Q13017 1502 aa22.15■■□□□ 1.14
SLC27A1-201ENST00000252595 TCOF1Q13428 1488 aaKnown RBP22.14■■□□□ 1.13
SLC27A1-201ENST00000252595 KIF14Q15058 1648 aa22.13■■□□□ 1.13
SLC27A1-201ENST00000252595 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
SLC27A1-201ENST00000252595 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
SLC27A1-201ENST00000252595 ANP32EQ9BTT0 268 aa22.11■■□□□ 1.13
SLC27A1-201ENST00000252595 STK26Q9P289 416 aa22.1■■□□□ 1.13
SLC27A1-201ENST00000252595 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
SLC27A1-201ENST00000252595 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms