RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
SIX1-201ENST00000247182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.3
SIX1-201ENST00000247182 FANCD2Q9BXW9 1451 aa13.15□□□□□ -0.3
SIX1-201ENST00000247182 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
SIX1-201ENST00000247182 RGS3P49796 1198 aa13.15□□□□□ -0.3
SIX1-201ENST00000247182 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
SIX1-201ENST00000247182 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
SIX1-201ENST00000247182 TRIM44Q96DX7 344 aaPredicted RBP13.13□□□□□ -0.31
SIX1-201ENST00000247182 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
SIX1-201ENST00000247182 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
SIX1-201ENST00000247182 PTPRKQ15262 1439 aa13.12□□□□□ -0.31
SIX1-201ENST00000247182 PDE4AP27815 886 aa13.12□□□□□ -0.31
SIX1-201ENST00000247182 CFDP1Q9UEE9 299 aaPredicted RBP13.11□□□□□ -0.31
SIX1-201ENST00000247182 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
SIX1-201ENST00000247182 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
SIX1-201ENST00000247182 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
SIX1-201ENST00000247182 SLKQ9H2G2 1235 aaPredicted RBP13.1□□□□□ -0.31
SIX1-201ENST00000247182 FMN1Q68DA7 1419 aa13.1□□□□□ -0.31
SIX1-201ENST00000247182 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
SIX1-201ENST00000247182 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.31
SIX1-201ENST00000247182 PKD2Q13563 968 aa13.08□□□□□ -0.31
SIX1-201ENST00000247182 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.31
SIX1-201ENST00000247182 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
SIX1-201ENST00000247182 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
SIX1-201ENST00000247182 TCERG1O14776 1098 aaKnown RBP13.07□□□□□ -0.32
SIX1-201ENST00000247182 ANP32BQ92688 251 aaKnown RBP13.06□□□□□ -0.32
SIX1-201ENST00000247182 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
SIX1-201ENST00000247182 UACAQ9BZF9 1416 aa13.06□□□□□ -0.32
SIX1-201ENST00000247182 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
SIX1-201ENST00000247182 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
SIX1-201ENST00000247182 CANXP27824 592 aaKnown RBP13.05□□□□□ -0.32
SIX1-201ENST00000247182 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
SIX1-201ENST00000247182 KIF7Q2M1P5 1343 aa13.05□□□□□ -0.32
SIX1-201ENST00000247182 CC2D1BQ5T0F9 858 aaKnown RBP13.04□□□□□ -0.32
SIX1-201ENST00000247182 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
SIX1-201ENST00000247182 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
SIX1-201ENST00000247182 NAIPQ13075 1403 aa13.04□□□□□ -0.32
SIX1-201ENST00000247182 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
SIX1-201ENST00000247182 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.32
SIX1-201ENST00000247182 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
SIX1-201ENST00000247182 POLA1P09884 1462 aaPredicted RBP13.02□□□□□ -0.33
SIX1-201ENST00000247182 FRAT2O75474 233 aaPredicted RBP13.01□□□□□ -0.33
SIX1-201ENST00000247182 L1TD1Q5T7N2 865 aaKnown RBP13.01□□□□□ -0.33
SIX1-201ENST00000247182 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
SIX1-201ENST00000247182 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
SIX1-201ENST00000247182 CCDC7Q96M83 1385 aa13□□□□□ -0.33
SIX1-201ENST00000247182 BECN1Q14457 450 aa13□□□□□ -0.33
SIX1-201ENST00000247182 AKNAQ7Z591 1439 aa13□□□□□ -0.33
SIX1-201ENST00000247182 PLIN1O60240 522 aa12.99□□□□□ -0.33
SIX1-201ENST00000247182 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
SIX1-201ENST00000247182 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
SIX1-201ENST00000247182 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
SIX1-201ENST00000247182 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
SIX1-201ENST00000247182 HFM1A2PYH4 1435 aa12.98□□□□□ -0.33
SIX1-201ENST00000247182 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
SIX1-201ENST00000247182 ZBTB7CA1YPR0 619 aa12.98□□□□□ -0.33
SIX1-201ENST00000247182 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
SIX1-201ENST00000247182 FAM43AQ8N2R8 423 aa12.96□□□□□ -0.33
SIX1-201ENST00000247182 HNRNPMP52272 730 aaKnown RBP eCLIP12.96□□□□□ -0.33
SIX1-201ENST00000247182 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.34
SIX1-201ENST00000247182 TOPBP1Q92547 1522 aa12.96□□□□□ -0.34
SIX1-201ENST00000247182 RCAN3Q9UKA8 241 aa12.95□□□□□ -0.34
SIX1-201ENST00000247182 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
SIX1-201ENST00000247182 GOLGA6L3A6NEY3 463 aa12.94□□□□□ -0.34
SIX1-201ENST00000247182 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
SIX1-201ENST00000247182 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
SIX1-201ENST00000247182 CDK13Q14004 1512 aaKnown RBP12.93□□□□□ -0.34
SIX1-201ENST00000247182 NUP155O75694 1391 aa12.93□□□□□ -0.34
SIX1-201ENST00000247182 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
SIX1-201ENST00000247182 USP47Q96K76 1375 aa12.91□□□□□ -0.34
SIX1-201ENST00000247182 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
SIX1-201ENST00000247182 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
SIX1-201ENST00000247182 MYH16Q9H6N6 1097 aa12.89□□□□□ -0.35
SIX1-201ENST00000247182 NCLP19338 710 aaKnown RBP12.89□□□□□ -0.35
SIX1-201ENST00000247182 CC2D2AQ9P2K1 1620 aa12.88□□□□□ -0.35
SIX1-201ENST00000247182 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
SIX1-201ENST00000247182 FAM13BQ9NYF5 915 aa12.87□□□□□ -0.35
SIX1-201ENST00000247182 DNTTIP2Q5QJE6 756 aaKnown RBP12.87□□□□□ -0.35
SIX1-201ENST00000247182 PTPN23Q9H3S7 1636 aa12.87□□□□□ -0.35
SIX1-201ENST00000247182 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
SIX1-201ENST00000247182 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
SIX1-201ENST00000247182 POGKQ9P215 609 aa12.85□□□□□ -0.35
SIX1-201ENST00000247182 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
SIX1-201ENST00000247182 MSNP26038 577 aaKnown RBP12.85□□□□□ -0.35
SIX1-201ENST00000247182 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
SIX1-201ENST00000247182 NBPF1Q3BBV0 1214 aa12.85□□□□□ -0.35
SIX1-201ENST00000247182 RBM10P98175 930 aaKnown RBP12.84□□□□□ -0.35
SIX1-201ENST00000247182 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
SIX1-201ENST00000247182 PRG4Q92954 1404 aaPredicted RBP12.84□□□□□ -0.35
SIX1-201ENST00000247182 RRP9O43818 475 aaKnown RBP12.83□□□□□ -0.36
SIX1-201ENST00000247182 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
SIX1-201ENST00000247182 MS4A1P11836 297 aa12.82□□□□□ -0.36
SIX1-201ENST00000247182 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
SIX1-201ENST00000247182 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
SIX1-201ENST00000247182 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
SIX1-201ENST00000247182 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
SIX1-201ENST00000247182 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
SIX1-201ENST00000247182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.81□□□□□ -0.36
SIX1-201ENST00000247182 CRBNQ96SW2 442 aa12.81□□□□□ -0.36
SIX1-201ENST00000247182 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms