RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 USP35Q9P2H5 1018 aa17.44■□□□□ 0.38
TARDBP-201ENST00000240185 APBB1O00213 710 aa17.43■□□□□ 0.38
TARDBP-201ENST00000240185 CALRP27797 417 aaKnown RBP17.43■□□□□ 0.38
TARDBP-201ENST00000240185 ZNF771Q7L3S4 317 aaPredicted RBP17.41■□□□□ 0.38
TARDBP-201ENST00000240185 MFAP1P55081 439 aaKnown RBP17.41■□□□□ 0.38
TARDBP-201ENST00000240185 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
TARDBP-201ENST00000240185 RCAN3Q9UKA8 241 aa17.4■□□□□ 0.38
TARDBP-201ENST00000240185 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.38
TARDBP-201ENST00000240185 NPHP1O15259 732 aa17.38■□□□□ 0.37
TARDBP-201ENST00000240185 GSE1Q14687 1217 aa17.38■□□□□ 0.37
TARDBP-201ENST00000240185 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
TARDBP-201ENST00000240185 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
TARDBP-201ENST00000240185 TPM3P06753 285 aa17.36■□□□□ 0.37
TARDBP-201ENST00000240185 PHF14O94880 888 aa17.35■□□□□ 0.37
TARDBP-201ENST00000240185 PDE4CQ08493 712 aa17.35■□□□□ 0.37
TARDBP-201ENST00000240185 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
TARDBP-201ENST00000240185 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
TARDBP-201ENST00000240185 ISY1Q9ULR0 285 aaKnown RBP17.34■□□□□ 0.37
TARDBP-201ENST00000240185 CCDC34Q96HJ3 373 aa17.34■□□□□ 0.37
TARDBP-201ENST00000240185 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.36
TARDBP-201ENST00000240185 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.36
TARDBP-201ENST00000240185 POGKQ9P215 609 aa17.33■□□□□ 0.36
TARDBP-201ENST00000240185 TMF1P82094 1093 aa17.32■□□□□ 0.36
TARDBP-201ENST00000240185 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-201ENST00000240185 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
TARDBP-201ENST00000240185 FAM13BQ9NYF5 915 aa17.32■□□□□ 0.36
TARDBP-201ENST00000240185 GPS2Q13227 327 aa17.3■□□□□ 0.36
TARDBP-201ENST00000240185 CCAR2Q8N163 923 aaKnown RBP17.3■□□□□ 0.36
TARDBP-201ENST00000240185 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
TARDBP-201ENST00000240185 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
TARDBP-201ENST00000240185 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
TARDBP-201ENST00000240185 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
TARDBP-201ENST00000240185 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
TARDBP-201ENST00000240185 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
TARDBP-201ENST00000240185 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
TARDBP-201ENST00000240185 MORC1Q86VD1 984 aa17.26■□□□□ 0.35
TARDBP-201ENST00000240185 PRM3Q9NNZ6 103 aa17.26■□□□□ 0.35
TARDBP-201ENST00000240185 FOXD4L5Q5VV16 416 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-201ENST00000240185 FOXD4L4Q8WXT5 416 aaPredicted RBP17.25■□□□□ 0.35
TARDBP-201ENST00000240185 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
TARDBP-201ENST00000240185 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
TARDBP-201ENST00000240185 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
TARDBP-201ENST00000240185 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-201ENST00000240185 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
TARDBP-201ENST00000240185 TEX35Q5T0J7 233 aa17.23■□□□□ 0.35
TARDBP-201ENST00000240185 ST18O60284 1047 aa17.23■□□□□ 0.35
TARDBP-201ENST00000240185 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
TARDBP-201ENST00000240185 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
TARDBP-201ENST00000240185 RASSF8Q8NHQ8 419 aa17.22■□□□□ 0.35
TARDBP-201ENST00000240185 TRIM6-TRIM34B2RNG4 842 aa17.22■□□□□ 0.35
TARDBP-201ENST00000240185 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
TARDBP-201ENST00000240185 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
TARDBP-201ENST00000240185 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
TARDBP-201ENST00000240185 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
TARDBP-201ENST00000240185 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
TARDBP-201ENST00000240185 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
TARDBP-201ENST00000240185 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
TARDBP-201ENST00000240185 BECN2A8MW95 431 aa17.19■□□□□ 0.34
TARDBP-201ENST00000240185 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
TARDBP-201ENST00000240185 SOX12O15370 315 aa17.18■□□□□ 0.34
TARDBP-201ENST00000240185 CCDC70Q6NSX1 233 aa17.17■□□□□ 0.34
TARDBP-201ENST00000240185 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
TARDBP-201ENST00000240185 FAM43AQ8N2R8 423 aa17.17■□□□□ 0.34
TARDBP-201ENST00000240185 PDE4AP27815 886 aa17.17■□□□□ 0.34
TARDBP-201ENST00000240185 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
TARDBP-201ENST00000240185 PES1O00541 588 aaKnown RBP17.17■□□□□ 0.34
TARDBP-201ENST00000240185 TSR1Q2NL82 804 aaKnown RBP17.16■□□□□ 0.34
TARDBP-201ENST00000240185 PKNOX2Q96KN3 472 aa17.16■□□□□ 0.34
TARDBP-201ENST00000240185 CLUAP1Q96AJ1 413 aa17.16■□□□□ 0.34
TARDBP-201ENST00000240185 APPP05067 770 aa17.15■□□□□ 0.34
TARDBP-201ENST00000240185 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
TARDBP-201ENST00000240185 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.343e-7■■■□□ 15.3
TARDBP-201ENST00000240185 SMC4Q9NTJ3 1288 aa17.15■□□□□ 0.34
TARDBP-201ENST00000240185 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
TARDBP-201ENST00000240185 NACADO15069 1562 aa17.14■□□□□ 0.34
TARDBP-201ENST00000240185 HMMRO75330 724 aa17.14■□□□□ 0.33
TARDBP-201ENST00000240185 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
TARDBP-201ENST00000240185 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.33
TARDBP-201ENST00000240185 SRPK2P78362 688 aaKnown RBP17.13■□□□□ 0.33
TARDBP-201ENST00000240185 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
TARDBP-201ENST00000240185 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
TARDBP-201ENST00000240185 RALBP1Q15311 655 aa17.13■□□□□ 0.33
TARDBP-201ENST00000240185 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-201ENST00000240185 FOXD4L6Q3SYB3 417 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-201ENST00000240185 FOXD4L3Q6VB84 417 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-201ENST00000240185 ATP6V1DQ9Y5K8 247 aa17.12■□□□□ 0.33
TARDBP-201ENST00000240185 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
TARDBP-201ENST00000240185 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
TARDBP-201ENST00000240185 TPM1P09493 284 aa17.11■□□□□ 0.33
TARDBP-201ENST00000240185 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
TARDBP-201ENST00000240185 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
TARDBP-201ENST00000240185 H3BQV1 296 aa17.08■□□□□ 0.33
TARDBP-201ENST00000240185 IFFO2Q5TF58 517 aa17.08■□□□□ 0.33
TARDBP-201ENST00000240185 EEA1Q15075 1411 aa17.08■□□□□ 0.32
TARDBP-201ENST00000240185 CENPJQ9HC77 1338 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-201ENST00000240185 STK31Q9BXU1 1019 aa17.07■□□□□ 0.32
TARDBP-201ENST00000240185 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
TARDBP-201ENST00000240185 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
TARDBP-201ENST00000240185 CENPQQ7L2Z9 268 aaPredicted RBP17.07■□□□□ 0.32
TARDBP-201ENST00000240185 MAP7D2Q96T17 732 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms