RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
EFNB1-201ENST00000204961 NPM2Q86SE8 214 aaKnown RBP20.56■□□□□ 0.88
EFNB1-201ENST00000204961 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
EFNB1-201ENST00000204961 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
EFNB1-201ENST00000204961 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
EFNB1-201ENST00000204961 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
EFNB1-201ENST00000204961 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
EFNB1-201ENST00000204961 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
EFNB1-201ENST00000204961 EPRSP07814 1512 aaKnown RBP20.52■□□□□ 0.88
EFNB1-201ENST00000204961 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
EFNB1-201ENST00000204961 ST20-MTHFSA0A0A6YYL1 179 aa20.5■□□□□ 0.87
EFNB1-201ENST00000204961 CCDC136Q96JN2 1154 aa20.5■□□□□ 0.87
EFNB1-201ENST00000204961 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
EFNB1-201ENST00000204961 PPP4R2Q9NY27 417 aa20.49■□□□□ 0.87
EFNB1-201ENST00000204961 AKNAQ7Z591 1439 aa20.49■□□□□ 0.87
EFNB1-201ENST00000204961 SUPT6HQ7KZ85 1726 aaKnown RBP20.48■□□□□ 0.87
EFNB1-201ENST00000204961 DENND4BO75064 1496 aaPredicted RBP20.48■□□□□ 0.87
EFNB1-201ENST00000204961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.47■□□□□ 0.87
EFNB1-201ENST00000204961 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
EFNB1-201ENST00000204961 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
EFNB1-201ENST00000204961 PLEKHD1A6NEE1 506 aa20.46■□□□□ 0.87
EFNB1-201ENST00000204961 NUP155O75694 1391 aa20.46■□□□□ 0.87
EFNB1-201ENST00000204961 CNTLNQ9NXG0 1405 aa20.46■□□□□ 0.87
EFNB1-201ENST00000204961 TSPY4P0CV99 314 aa20.45■□□□□ 0.86
EFNB1-201ENST00000204961 TSPY10P0CW01 314 aa20.45■□□□□ 0.86
EFNB1-201ENST00000204961 CUL7Q14999 1698 aa20.45■□□□□ 0.86
EFNB1-201ENST00000204961 SKAP1Q86WV1 359 aa20.44■□□□□ 0.86
EFNB1-201ENST00000204961 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
EFNB1-201ENST00000204961 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
EFNB1-201ENST00000204961 ANKRD30BQ9BXX2 1392 aa20.42■□□□□ 0.86
EFNB1-201ENST00000204961 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
EFNB1-201ENST00000204961 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
EFNB1-201ENST00000204961 ABCC5O15440 1437 aa20.42■□□□□ 0.86
EFNB1-201ENST00000204961 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
EFNB1-201ENST00000204961 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
EFNB1-201ENST00000204961 USP47Q96K76 1375 aa20.41■□□□□ 0.86
EFNB1-201ENST00000204961 DAPK1P53355 1430 aa20.4■□□□□ 0.86
EFNB1-201ENST00000204961 PLIN1O60240 522 aa20.38■□□□□ 0.85
EFNB1-201ENST00000204961 NBPF1Q3BBV0 1214 aa20.38■□□□□ 0.85
EFNB1-201ENST00000204961 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
EFNB1-201ENST00000204961 IQGAP2Q13576 1575 aa20.34■□□□□ 0.85
EFNB1-201ENST00000204961 ZBED9Q6R2W3 1325 aa20.34■□□□□ 0.85
EFNB1-201ENST00000204961 PAK3O75914 559 aaPredicted RBP20.33■□□□□ 0.85
EFNB1-201ENST00000204961 ERCC6Q03468 1493 aa20.33■□□□□ 0.84
EFNB1-201ENST00000204961 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
EFNB1-201ENST00000204961 SAMD9Q5K651 1589 aa20.32■□□□□ 0.84
EFNB1-201ENST00000204961 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
EFNB1-201ENST00000204961 NCOA1Q15788 1441 aa20.31■□□□□ 0.84
EFNB1-201ENST00000204961 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
EFNB1-201ENST00000204961 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
EFNB1-201ENST00000204961 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.84
EFNB1-201ENST00000204961 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.83
EFNB1-201ENST00000204961 NUDCQ9Y266 331 aa20.27■□□□□ 0.83
EFNB1-201ENST00000204961 RPRD2Q5VT52 1461 aaKnown RBP20.25■□□□□ 0.83
EFNB1-201ENST00000204961 ROCK2O75116 1388 aaKnown RBP20.24■□□□□ 0.83
EFNB1-201ENST00000204961 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
EFNB1-201ENST00000204961 MIA2Q96PC5 1412 aa20.23■□□□□ 0.83
EFNB1-201ENST00000204961 ANKRD50Q9ULJ7 1429 aa20.23■□□□□ 0.83
EFNB1-201ENST00000204961 PNISRQ8TF01 805 aaKnown RBP20.23■□□□□ 0.83
EFNB1-201ENST00000204961 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
EFNB1-201ENST00000204961 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
EFNB1-201ENST00000204961 WDR62O43379 1518 aa20.19■□□□□ 0.82
EFNB1-201ENST00000204961 TARBP1Q13395 1621 aaKnown RBP20.19■□□□□ 0.82
EFNB1-201ENST00000204961 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
EFNB1-201ENST00000204961 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
EFNB1-201ENST00000204961 DISP1Q96F81 1524 aa20.18■□□□□ 0.82
EFNB1-201ENST00000204961 TEX14Q8IWB6 1497 aa20.17■□□□□ 0.82
EFNB1-201ENST00000204961 PANK3Q9H999 370 aa20.17■□□□□ 0.82
EFNB1-201ENST00000204961 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
EFNB1-201ENST00000204961 PZPP20742 1482 aa20.16■□□□□ 0.82
EFNB1-201ENST00000204961 DEKP35659 375 aaKnown RBP20.15■□□□□ 0.82
EFNB1-201ENST00000204961 ANP32AP39687 249 aaKnown RBP20.15■□□□□ 0.82
EFNB1-201ENST00000204961 DHX29Q7Z478 1369 aaKnown RBP20.15■□□□□ 0.82
EFNB1-201ENST00000204961 KIAA1107Q9UPP5 1409 aa20.15■□□□□ 0.82
EFNB1-201ENST00000204961 TNNT2P45379 298 aaPredicted RBP20.15■□□□□ 0.82
EFNB1-201ENST00000204961 NOP58Q9Y2X3 529 aaKnown RBP20.15■□□□□ 0.82
EFNB1-201ENST00000204961 KIF15Q9NS87 1388 aa20.15■□□□□ 0.82
EFNB1-201ENST00000204961 TROQ12816 1431 aaPredicted RBP20.15■□□□□ 0.82
EFNB1-201ENST00000204961 GPATCH8Q9UKJ3 1502 aaKnown RBP20.14■□□□□ 0.81
EFNB1-201ENST00000204961 CHGAP10645 457 aaKnown RBP20.14■□□□□ 0.81
EFNB1-201ENST00000204961 RCAN3Q9UKA8 241 aa20.13■□□□□ 0.81
EFNB1-201ENST00000204961 KIAA0586Q9BVV6 1533 aa20.13■□□□□ 0.81
EFNB1-201ENST00000204961 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
EFNB1-201ENST00000204961 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
EFNB1-201ENST00000204961 KIF14Q15058 1648 aa20.12■□□□□ 0.81
EFNB1-201ENST00000204961 SPATA31E1Q6ZUB1 1445 aa20.11■□□□□ 0.81
EFNB1-201ENST00000204961 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
EFNB1-201ENST00000204961 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
EFNB1-201ENST00000204961 PBRM1Q86U86 1689 aa20.11■□□□□ 0.81
EFNB1-201ENST00000204961 ZBTB47Q9UFB7 747 aaPredicted RBP20.1■□□□□ 0.81
EFNB1-201ENST00000204961 SLC4A3P48751 1232 aa20.1■□□□□ 0.81
EFNB1-201ENST00000204961 ROCK1Q13464 1354 aa20.09■□□□□ 0.81
EFNB1-201ENST00000204961 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
EFNB1-201ENST00000204961 C9orf84Q5VXU9 1444 aa20.08■□□□□ 0.81
EFNB1-201ENST00000204961 CARMIL2Q6F5E8 1435 aa20.07■□□□□ 0.8
EFNB1-201ENST00000204961 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
EFNB1-201ENST00000204961 GCC2Q8IWJ2 1684 aa20.06■□□□□ 0.8
EFNB1-201ENST00000204961 C20orf194Q5TEA3 1177 aa20.05■□□□□ 0.8
EFNB1-201ENST00000204961 RRP1P56182 461 aaKnown RBP20.05■□□□□ 0.8
EFNB1-201ENST00000204961 RTN4Q9NQC3 1192 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms