RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Camsap1A2AHC3 1581 aa18.23■□□□□ 0.51
Pcdha1-202ENSMUST00000193839 Stag3O70576 1240 aa18.22■□□□□ 0.51
Pcdha1-202ENSMUST00000193839 Rundc1Q0VDN7 615 aa18.21■□□□□ 0.51
Pcdha1-202ENSMUST00000193839 Cc2d2bA0A286YDU8 1405 aa18.21■□□□□ 0.51
Pcdha1-202ENSMUST00000193839 Ccdc27Q3V036 639 aa18.2■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Ift140E9PY46 1464 aa18.2■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Kif3bQ61771 747 aa18.19■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 PtprkP35822 1457 aa18.17■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Naip1Q9QWK5 1403 aa18.17■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Ifit1bl1D3Z6F0 470 aa18.16■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Ofd1Q80Z25 1017 aa18.16■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Gm7298A0A0N4SVU1 1476 aa18.16■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Fhad1A6PWD2 1420 aa18.15■□□□□ 0.5
Pcdha1-202ENSMUST00000193839 Fgd6Q69ZL1 1399 aa18.14■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Arid4bA2CG63 1314 aaKnown RBP18.13■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Bcl11aQ9QYE3 773 aa18.12■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Tdrd9Q14BI7 1383 aa18.12■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Gtf2e1Q9D0D5 440 aa18.12■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Zfp777B9EKF4 885 aa18.11■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Plb1Q3TTY0 1478 aa18.11■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Arap1Q4LDD4 1452 aa18.11■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Arhgef5E9Q7D5 1581 aa18.1■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 MyclP10166 368 aa18.1■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 AqrQ8CFQ3 1481 aaKnown RBP18.09■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 EprsQ8CGC7 1512 aaKnown RBP18.09■□□□□ 0.49
Pcdha1-202ENSMUST00000193839 Spag9Q58A65 1321 aaKnown RBP18.08■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Crocc2F6XLV1 1638 aa18.07■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Stard8Q8K031 1019 aa18.06■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Arhgap31A6X8Z5 1425 aa18.06■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Ankrd36D3Z4K0 1415 aa18.06■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Usp47Q8BY87 1376 aa18.05■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Vps8Q0P5W1 1427 aa18.05■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 CadpsQ80TJ1 1355 aa18.04■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Rock2P70336 1388 aa18.04■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Tmf1B9EKI3 1091 aa18.03■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Sin3aQ60520 1274 aaKnown RBP18.03■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 Mapk8ip3Q9ESN9 1337 aa18.03■□□□□ 0.48
Pcdha1-202ENSMUST00000193839 SynmQ70IV5 1561 aa18.01■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Prdm16A2A935 1275 aa18.01■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Srcin1Q9QWI6 1250 aa18.01■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Fam163aQ8CAA5 168 aa18■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Tiam1Q60610 1591 aa17.99■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Wwc2Q6NXJ0 1187 aa17.99■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Rangap1P46061 589 aaKnown RBP17.98■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Gm14025A2AP89 1413 aa17.97■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Cnga1P29974 684 aa17.97■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Iqcf3Q9D498 203 aa17.96■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 CanxP35564 591 aaKnown RBP17.96■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Nsd2Q8BVE8 1365 aa17.96■□□□□ 0.47
Pcdha1-202ENSMUST00000193839 Ccdc141E9Q8Q6 1531 aa17.95■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Htatsf1Q8BGC0 757 aa17.94■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Fgd1P52734 960 aa17.94■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Stk26Q99JT2 416 aa17.94■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 TchhA0A0B4J1F9 1599 aa17.93■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Psme1P97371 249 aa17.93■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Trim26Q99PN3 545 aa17.92■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Ppm1gQ61074 542 aa17.92■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Txndc2Q6P902 515 aa17.91■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 NgefQ8CHT1 710 aa17.91■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Irx3P81067 507 aa17.91■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Ncapd3Q6ZQK0 1506 aa17.91■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Exoc6Q8R313 802 aa17.9■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Zscan21Q07231 555 aa17.9■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 NudcO35685 332 aaKnown RBP17.9■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Grin2aP35436 1464 aa17.89■□□□□ 0.46
Pcdha1-202ENSMUST00000193839 Neurod2Q62414 383 aa17.89■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Arhgap5P97393 1501 aa17.88■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Mbd3Q9Z2D8 285 aaKnown RBP17.86■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Fan1Q69ZT1 1020 aa17.86■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 CenpjQ569L8 1344 aa17.85■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Chmp4bQ9D8B3 224 aaKnown RBP17.84■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Tcerg1Q8CGF7 1100 aaKnown RBP17.84■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Il16O54824 1322 aa17.84■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 SafbD3YXK2 937 aaKnown RBP17.84■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Trim44Q9QXA7 346 aa17.84■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Pde4cQ3UEI1 686 aa17.83■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 Fam135aQ6NS59 1506 aa17.83■□□□□ 0.45
Pcdha1-202ENSMUST00000193839 ErbinQ80TH2 1402 aa17.83■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Dcaf11Q91VU6 549 aa17.82■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Hsp90ab1P11499 724 aaKnown RBP17.82■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Mak16Q8BGS0 296 aaKnown RBP17.82■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Dapk1Q80YE7 1442 aa17.81■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Pcf11G3X9Z4 1553 aa17.8■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 TnnQ80Z71 1560 aa17.8■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Slc4a1apE9PX68 744 aa17.8■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Igf1rQ60751 1373 aa17.79■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Mug1P28665 1476 aa17.79■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 ArxO35085 564 aa17.79■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Utp14aQ640M1 767 aaKnown RBP17.79■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Dnajc5bQ9CQ94 199 aa17.79■□□□□ 0.44
Pcdha1-202ENSMUST00000193839 Ythdc1E9Q5K9 736 aaKnown RBP17.77■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Magi1Q6RHR9 1471 aa17.76■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Rwdd1Q9CQK7 243 aa17.76■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Trim30dE9PWL0 497 aa17.76■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Neo1P97798 1493 aa17.75■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Apbb1Q9QXJ1 710 aa17.75■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Zfp644E9QA22 1323 aa17.75■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Usp40Q8BWR4 1235 aa17.75■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Supt16hQ920B9 1047 aa17.74■□□□□ 0.43
Pcdha1-202ENSMUST00000193839 Smg6P61406 1418 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 71.8 ms