RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Stk26Q99JT2 416 aa15.83■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Znf316Q6PGE4 1016 aa15.82■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Erich6bQ9D4S6 220 aa15.82■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Fam71e1A1L3C1 212 aa15.81■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Calcoco2A2A6M5 331 aa15.81■□□□□ 0.12
Col6a3-208ENSMUST00000188587 PtmsQ9D0J8 101 aaKnown RBP15.8■□□□□ 0.12
Col6a3-208ENSMUST00000188587 AknaQ80VW7 1404 aa15.8■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Tmf1B9EKI3 1091 aa15.8■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Spag9Q58A65 1321 aaKnown RBP15.79■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Noc3lQ8VI84 807 aaKnown RBP15.79■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Iffo2Q8R2V2 512 aa15.79■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Q3TQI7 289 aaKnown RBP15.78■□□□□ 0.12
Col6a3-208ENSMUST00000188587 MecomP14404 1042 aa15.78■□□□□ 0.12
Col6a3-208ENSMUST00000188587 Isy1Q69ZQ2 285 aaKnown RBP15.77■□□□□ 0.11
Col6a3-208ENSMUST00000188587 MlecQ6ZQI3 291 aaKnown RBP15.76■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Sox12Q04890 314 aa15.75■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Tnnt1O88346 262 aa15.74■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Gtf2e1Q9D0D5 440 aa15.74■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Txndc2Q6P902 515 aa15.74■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Cald1E9QA15 768 aaKnown RBP15.73■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Tmco5bQ80X59 307 aa15.73■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Ifit1bl1D3Z6F0 470 aa15.72■□□□□ 0.11
Col6a3-208ENSMUST00000188587 R3hcc1Q8BSI6 488 aa15.72■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Vps53Q8CCB4 832 aa15.72■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Aebp2Q9Z248 504 aaKnown RBP15.71■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Birc3O08863 600 aa15.71■□□□□ 0.11
Col6a3-208ENSMUST00000188587 Kif27Q7M6Z4 1394 aa15.71■□□□□ 0.11
Col6a3-208ENSMUST00000188587 CgnP59242 1191 aa15.7■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Ecm2Q5FW85 670 aa15.7■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Rundc1Q0VDN7 615 aa15.7■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Chmp3Q9CQ10 224 aa15.7■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Speer4f1Q9D5Q6 258 aa15.69■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Map4P27546 1125 aaKnown RBP15.69■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Smarce1O54941 411 aaKnown RBP15.69■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Tnnt2P50752 301 aa15.68■□□□□ 0.1
Col6a3-208ENSMUST00000188587 U2af1Q9D883 239 aaKnown RBP15.68■□□□□ 0.1
Col6a3-208ENSMUST00000188587 SetQ9EQU5 289 aaKnown RBP15.68■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Arid3cA6PWV5 409 aa15.67■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Ppm1fQ8CGA0 452 aa15.67■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Rpap1Q80TE0 1409 aa15.66■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Dnttip2Q8R2M2 758 aaKnown RBP15.66■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Golga2Q921M4 999 aa15.65■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Tomm22Q9CPQ3 142 aa15.65■□□□□ 0.1
Col6a3-208ENSMUST00000188587 Ubap1lG3UW59 384 aa15.64■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Lemd3Q9WU40 921 aa15.64■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Brpf1B2RRD7 1212 aa15.64■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Ccdc47Q9D024 483 aaKnown RBP15.64■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Tpd52l1O54818 204 aa15.63■□□□□ 0.09
Col6a3-208ENSMUST00000188587 RdxP26043 583 aaKnown RBP15.63■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Slc4a1apE9PX68 744 aa15.63■□□□□ 0.09
Col6a3-208ENSMUST00000188587 EspnQ9ET47 871 aa15.63■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Chmp5Q9D7S9 219 aa15.62■□□□□ 0.09
Col6a3-208ENSMUST00000188587 MsnP26041 577 aaKnown RBP15.62■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Slc4a3P16283 1227 aa15.61■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Prm3Q62100 101 aa15.61■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Ap3b2Q9JME5 1082 aa15.61■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Znf330Q922H9 316 aa15.6■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Ciz1Q8VEH2 845 aa15.6■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Kdm5dQ62240 1548 aa15.6■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Pkd2O35245 966 aa15.59■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Mical1Q8VDP3 1048 aa15.59■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Fyco1Q8VDC1 1437 aa15.59■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Pak3Q61036 559 aa15.59■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Rock2P70336 1388 aa15.59■□□□□ 0.09
Col6a3-208ENSMUST00000188587 CrebrfQ8CDG5 640 aaKnown RBP15.59■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Dcaf11Q91VU6 549 aa15.58■□□□□ 0.09
Col6a3-208ENSMUST00000188587 Tpm4Q6IRU2 248 aa15.58■□□□□ 0.08
Col6a3-208ENSMUST00000188587 AU015836B2RUM3 263 aa15.58■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Hspa5P20029 655 aaKnown RBP15.58■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Dnai1Q8C0M8 701 aa15.57■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Kri1Q8VDQ9 704 aaKnown RBP15.57■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Senp3Q9EP97 568 aaKnown RBP15.57■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Arhgap35Q91YM2 1499 aa15.57■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Ccer1Q9CQL2 403 aa15.56■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Rsph4aQ8BYM7 716 aa15.56■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Tcerg1Q8CGF7 1100 aaKnown RBP15.55■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Zscan21Q07231 555 aa15.55■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Trak1Q6PD31 939 aa15.55■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Tpm3P21107 285 aaKnown RBP15.54■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Plekhh2Q8C115 1491 aa15.54■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Mfap1aC0HKD8 439 aaKnown RBP15.54■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Mfap1bC0HKD9 439 aaKnown RBP15.54■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Pibf1E9Q6K3 756 aa15.54■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Cluap1Q8R3P7 413 aa15.53■□□□□ 0.08
Col6a3-208ENSMUST00000188587 GorabQ8BRM2 368 aa15.53■□□□□ 0.08
Col6a3-208ENSMUST00000188587 Ksr2Q3UVC0 959 aa15.52■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Ipo8Q7TMY7 1010 aa15.51■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Baz1bQ9Z277 1479 aa15.51■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Tpm2P58774 284 aa15.51■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Ddx11Q6AXC6 880 aa15.51■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Gm21969J3QJZ1 289 aa15.5■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Ftsj3Q9DBE9 838 aaKnown RBP15.5■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Ccar1Q8CH18 1146 aaKnown RBP15.5■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Pds5bQ4VA53 1446 aaKnown RBP15.5■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Atp6v1dP57746 247 aa15.49■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Supt16hQ920B9 1047 aa15.49■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Krt82Q99M74 516 aa15.49■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Fmn1Q05860 1466 aa15.49■□□□□ 0.07
Col6a3-208ENSMUST00000188587 Slc4a10Q5DTL9 1118 aa15.49■□□□□ 0.07
Col6a3-208ENSMUST00000188587 CenpjQ569L8 1344 aa15.48■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms