RNA–Protein interactions for RNA: ENSMUST00000170957.2

Ggps1-201, Transcript of Geranylgeranyl pyrophosphate synthase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ggps1, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1-201ENSMUST00000170957 PxdnQ3UQ28 1475 aa12.95□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Unc13aQ4KUS2 1712 aa12.94□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Pla2r1Q62028 1487 aa12.94□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Gm20521D3Z5F7 333 aa12.93□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Ifit1bl1D3Z6F0 470 aa12.93□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Tiam1Q60610 1591 aa12.93□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Map3k5O35099 1380 aa12.93□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Mrs2Q5NCE8 434 aa12.93□□□□□ -0.34
Ggps1-201ENSMUST00000170957 TchhA0A0B4J1F9 1599 aa12.92□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Srpk2O54781 681 aaKnown RBP12.91□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Ankrd26Q811D2 1581 aa12.91□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Nlrp6Q91WS2 869 aa12.9□□□□□ -0.34
Ggps1-201ENSMUST00000170957 Rundc1Q0VDN7 615 aa12.89□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Gpatch8A2A6A1 1505 aa12.89□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Cnga1P29974 684 aa12.88□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Spag9Q58A65 1321 aaKnown RBP12.88□□□□□ -0.35
Ggps1-201ENSMUST00000170957 MlecQ6ZQI3 291 aaKnown RBP12.87□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Ccdc141E9Q8Q6 1531 aa12.87□□□□□ -0.35
Ggps1-201ENSMUST00000170957 WizO88286 1684 aaKnown RBP12.87□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Stk26Q99JT2 416 aa12.86□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Mug1P28665 1476 aa12.86□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Ncapd3Q6ZQK0 1506 aa12.86□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Cwc22Q8C5N3 908 aaKnown RBP12.85□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Fam163aQ8CAA5 168 aa12.85□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Slx4Q6P1D7 1565 aa12.85□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Magi3Q9EQJ9 1476 aa12.84□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Rad21Q61550 635 aaKnown RBP12.84□□□□□ -0.35
Ggps1-201ENSMUST00000170957 NexmifQ5DTT1 1515 aa12.84□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Fhad1A6PWD2 1420 aa12.84□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Usp47Q8BY87 1376 aa12.84□□□□□ -0.35
Ggps1-201ENSMUST00000170957 Arhgap5P97393 1501 aa12.83□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Ecm2Q5FW85 670 aa12.83□□□□□ -0.36
Ggps1-201ENSMUST00000170957 NeflP08551 543 aa12.81□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Rangap1P46061 589 aaKnown RBP12.81□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Ncoa3O09000 1398 aa12.81□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Gm38655A0A286YDK6 273 aa12.81□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Stag3O70576 1240 aa12.81□□□□□ -0.36
Ggps1-201ENSMUST00000170957 NgefQ8CHT1 710 aa12.81□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Wwc2Q6NXJ0 1187 aa12.8□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Magi1Q6RHR9 1471 aa12.8□□□□□ -0.36
Ggps1-201ENSMUST00000170957 IqubQ8CDK3 788 aa12.79□□□□□ -0.36
Ggps1-201ENSMUST00000170957 CenpbP27790 599 aa12.79□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Pde4cQ3UEI1 686 aa12.79□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Ythdc2B2RR83 1445 aaKnown RBP12.78□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Polr3glQ8R0C0 218 aa12.78□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Ttll5Q8CHB8 1328 aa12.78□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Nup160Q9Z0W3 1402 aaKnown RBP12.78□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Vps8Q0P5W1 1427 aa12.78□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Gm1043A0A140LJC2 1431 aa12.77□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Fan1Q69ZT1 1020 aa12.77□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Rsph4aQ8BYM7 716 aa12.77□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Gm156Q58A37 223 aa12.77□□□□□ -0.36
Ggps1-201ENSMUST00000170957 Lrriq1Q0P5X1 1673 aa12.77□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Arid4bA2CG63 1314 aaKnown RBP12.77□□□□□ -0.37
Ggps1-201ENSMUST00000170957 A2mQ6GQT1 1474 aa12.76□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Shroom2A2ALU4 1481 aa12.76□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Exosc9Q9JHI7 438 aaKnown RBP12.76□□□□□ -0.37
Ggps1-201ENSMUST00000170957 3425401B19RikD3Z1D3 1412 aa12.76□□□□□ -0.37
Ggps1-201ENSMUST00000170957 BC005561E9Q5E2 1589 aa12.75□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Dhx9O70133 1380 aaKnown RBP12.75□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Abcc5Q9R1X5 1436 aa12.75□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Txndc2Q6P902 515 aa12.75□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Csrnp3P59055 597 aa12.74□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Prdm16A2A935 1275 aa12.74□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Igf1rQ60751 1373 aa12.73□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Ankrd36D3Z4K0 1415 aa12.73□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Znf316Q6PGE4 1016 aa12.72□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Atp10dQ8K2X1 1416 aa12.71□□□□□ -0.37
Ggps1-201ENSMUST00000170957 Naip2Q9QUK4 1447 aa12.7□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Afap1Q80YS6 731 aa12.7□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Psme1P97371 249 aa12.69□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Gtf2e1Q9D0D5 440 aa12.69□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Srcin1Q9QWI6 1250 aa12.68□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Il16O54824 1322 aa12.68□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Abcc1O35379 1528 aa12.67□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Prex2Q3LAC4 1598 aa12.66□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Trappc8E9PWG2 1437 aa12.66□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Nsd2Q8BVE8 1365 aa12.65□□□□□ -0.38
Ggps1-201ENSMUST00000170957 Rusc2Q80U22 1514 aa12.65□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Cd109Q8R422 1442 aa12.64□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Exoc6Q8R313 802 aa12.64□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Trim26Q99PN3 545 aa12.64□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Pbrm1Q8BSQ9 1634 aaKnown RBP12.64□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Sox12Q04890 314 aa12.64□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Shq1Q7TMX5 569 aa12.64□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Utp14aQ640M1 767 aaKnown RBP12.63□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Sall3Q62255 1320 aa12.63□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Eif4g1Q6NZJ6 1600 aaKnown RBP12.63□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Slc4a1apE9PX68 744 aa12.63□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Mlh3A0A1Y7VMP7 1443 aa12.63□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Gapvd1Q6PAR5 1458 aa12.63□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Rock2P70336 1388 aa12.62□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Rapgef6Q5NCJ1 1609 aa12.62□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Fancd2Q80V62 1450 aa12.62□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Caskin1Q6P9K8 1431 aa12.61□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Dapk1Q80YE7 1442 aa12.61□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Neurod2Q62414 383 aa12.61□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Usp40Q8BWR4 1235 aa12.6□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Anks4bQ8K3X6 423 aa12.59□□□□□ -0.39
Ggps1-201ENSMUST00000170957 Dcaf11Q91VU6 549 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms