RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Map4P27546 1125 aaKnown RBP13.57□□□□□ -0.24
Nup50-201ENSMUST00000165443 Fhad1A6PWD2 1420 aa13.57□□□□□ -0.24
Nup50-201ENSMUST00000165443 AU015836B2RUM3 263 aa13.57□□□□□ -0.24
Nup50-201ENSMUST00000165443 HnrnpuQ8VEK3 800 aaKnown RBP13.57□□□□□ -0.24
Nup50-201ENSMUST00000165443 Supt16hQ920B9 1047 aa13.56□□□□□ -0.24
Nup50-201ENSMUST00000165443 Rundc1Q0VDN7 615 aa13.56□□□□□ -0.24
Nup50-201ENSMUST00000165443 Rapgef2Q8CHG7 1496 aa13.56□□□□□ -0.24
Nup50-201ENSMUST00000165443 B4galnt3Q6L8S8 986 aa13.55□□□□□ -0.24
Nup50-201ENSMUST00000165443 Mak16Q8BGS0 296 aaKnown RBP13.55□□□□□ -0.24
Nup50-201ENSMUST00000165443 EspnQ9ET47 871 aa13.54□□□□□ -0.24
Nup50-201ENSMUST00000165443 Dnai1Q8C0M8 701 aa13.54□□□□□ -0.24
Nup50-201ENSMUST00000165443 Stk24Q99KH8 431 aa13.54□□□□□ -0.24
Nup50-201ENSMUST00000165443 Aebp1Q640N1 1128 aa13.54□□□□□ -0.24
Nup50-201ENSMUST00000165443 Exoc6Q8R313 802 aa13.53□□□□□ -0.24
Nup50-201ENSMUST00000165443 CntlnA2AM05 1397 aa13.53□□□□□ -0.24
Nup50-201ENSMUST00000165443 MccE9PWI3 1003 aa13.52□□□□□ -0.25
Nup50-201ENSMUST00000165443 Tmf1B9EKI3 1091 aa13.51□□□□□ -0.25
Nup50-201ENSMUST00000165443 Irx6Q9ER75 438 aa13.51□□□□□ -0.25
Nup50-201ENSMUST00000165443 Baz1bQ9Z277 1479 aa13.51□□□□□ -0.25
Nup50-201ENSMUST00000165443 Mphosph9A6H5Y1 991 aa13.5□□□□□ -0.25
Nup50-201ENSMUST00000165443 PnnO35691 725 aaKnown RBP13.5□□□□□ -0.25
Nup50-201ENSMUST00000165443 Lamc3Q9R0B6 1581 aa13.5□□□□□ -0.25
Nup50-201ENSMUST00000165443 Ipo9Q91YE6 1041 aa13.49□□□□□ -0.25
Nup50-201ENSMUST00000165443 Speer4f1Q9D5Q6 258 aa13.49□□□□□ -0.25
Nup50-201ENSMUST00000165443 Arhgap35Q91YM2 1499 aa13.49□□□□□ -0.25
Nup50-201ENSMUST00000165443 Hsp90b1P08113 802 aaKnown RBP13.49□□□□□ -0.25
Nup50-201ENSMUST00000165443 PrkcshO08795 521 aa13.49□□□□□ -0.25
Nup50-201ENSMUST00000165443 Slc4a3P16283 1227 aa13.49□□□□□ -0.25
Nup50-201ENSMUST00000165443 Znf326O88291 580 aa13.48□□□□□ -0.25
Nup50-201ENSMUST00000165443 Gtf2e1Q9D0D5 440 aa13.48□□□□□ -0.25
Nup50-201ENSMUST00000165443 Pde3bQ61409 1100 aa13.48□□□□□ -0.25
Nup50-201ENSMUST00000165443 Pes1Q9EQ61 584 aaKnown RBP13.48□□□□□ -0.25
Nup50-201ENSMUST00000165443 Armcx1Q9CX83 456 aa13.47□□□□□ -0.25
Nup50-201ENSMUST00000165443 Sin3aQ60520 1274 aaKnown RBP13.47□□□□□ -0.25
Nup50-201ENSMUST00000165443 LrpprcQ6PB66 1392 aaKnown RBP13.45□□□□□ -0.26
Nup50-201ENSMUST00000165443 Cabp1Q9JLK7 227 aa13.45□□□□□ -0.26
Nup50-201ENSMUST00000165443 Trak1Q6PD31 939 aa13.45□□□□□ -0.26
Nup50-201ENSMUST00000165443 Sart3Q9JLI8 962 aaKnown RBP13.44□□□□□ -0.26
Nup50-201ENSMUST00000165443 1700019A02RikA0A087WPV9 146 aa13.44□□□□□ -0.26
Nup50-201ENSMUST00000165443 Gm973E9Q295 1059 aa13.43□□□□□ -0.26
Nup50-201ENSMUST00000165443 Dnttip2Q8R2M2 758 aaKnown RBP13.43□□□□□ -0.26
Nup50-201ENSMUST00000165443 Ipo8Q7TMY7 1010 aa13.43□□□□□ -0.26
Nup50-201ENSMUST00000165443 Ifit1bl1D3Z6F0 470 aa13.43□□□□□ -0.26
Nup50-201ENSMUST00000165443 Spryd3E9Q9B3 442 aa13.43□□□□□ -0.26
Nup50-201ENSMUST00000165443 Cnga1P29974 684 aa13.42□□□□□ -0.26
Nup50-201ENSMUST00000165443 Rock2P70336 1388 aa13.42□□□□□ -0.26
Nup50-201ENSMUST00000165443 Golga2Q921M4 999 aa13.42□□□□□ -0.26
Nup50-201ENSMUST00000165443 NrkQ9R0G8 1455 aa13.4□□□□□ -0.26
Nup50-201ENSMUST00000165443 Stard8Q8K031 1019 aa13.4□□□□□ -0.26
Nup50-201ENSMUST00000165443 Thoc2B1AZI6 1594 aaKnown RBP13.4□□□□□ -0.26
Nup50-201ENSMUST00000165443 TnnQ80Z71 1560 aa13.39□□□□□ -0.27
Nup50-201ENSMUST00000165443 Dhx57Q6P5D3 1388 aaKnown RBP13.39□□□□□ -0.27
Nup50-201ENSMUST00000165443 Shroom4Q1W617 1475 aa13.39□□□□□ -0.27
Nup50-201ENSMUST00000165443 U2af1Q9D883 239 aaKnown RBP13.39□□□□□ -0.27
Nup50-201ENSMUST00000165443 Camsap1A2AHC3 1581 aa13.39□□□□□ -0.27
Nup50-201ENSMUST00000165443 Rtf1A2AQ19 715 aaKnown RBP13.38□□□□□ -0.27
Nup50-201ENSMUST00000165443 Srcin1Q9QWI6 1250 aa13.37□□□□□ -0.27
Nup50-201ENSMUST00000165443 4933402E13RikQ9D4D2 429 aa13.37□□□□□ -0.27
Nup50-201ENSMUST00000165443 Erich6bQ9D4S6 220 aa13.36□□□□□ -0.27
Nup50-201ENSMUST00000165443 NgefQ8CHT1 710 aa13.36□□□□□ -0.27
Nup50-201ENSMUST00000165443 Dhx29Q6PGC1 1365 aaKnown RBP13.36□□□□□ -0.27
Nup50-201ENSMUST00000165443 Grin2bQ01097 1482 aa13.36□□□□□ -0.27
Nup50-201ENSMUST00000165443 Efcab5A0JP43 1406 aa13.36□□□□□ -0.27
Nup50-201ENSMUST00000165443 Carmil1Q6EDY6 1374 aa13.35□□□□□ -0.27
Nup50-201ENSMUST00000165443 Dcaf11Q91VU6 549 aa13.35□□□□□ -0.27
Nup50-201ENSMUST00000165443 Lemd3Q9WU40 921 aa13.35□□□□□ -0.27
Nup50-201ENSMUST00000165443 Fam135aQ6NS59 1506 aa13.34□□□□□ -0.27
Nup50-201ENSMUST00000165443 UacaQ8CGB3 1411 aa13.34□□□□□ -0.27
Nup50-201ENSMUST00000165443 Nup155Q99P88 1391 aaKnown RBP13.33□□□□□ -0.27
Nup50-201ENSMUST00000165443 Calcoco2A2A6M5 331 aa13.33□□□□□ -0.28
Nup50-201ENSMUST00000165443 Tmco5bQ80X59 307 aa13.33□□□□□ -0.28
Nup50-201ENSMUST00000165443 Rpap1Q80TE0 1409 aa13.33□□□□□ -0.28
Nup50-201ENSMUST00000165443 Ccar1Q8CH18 1146 aaKnown RBP13.32□□□□□ -0.28
Nup50-201ENSMUST00000165443 Sh3bp5Q9Z131 463 aa13.32□□□□□ -0.28
Nup50-201ENSMUST00000165443 Smg6P61406 1418 aaKnown RBP13.32□□□□□ -0.28
Nup50-201ENSMUST00000165443 MsnP26041 577 aaKnown RBP13.32□□□□□ -0.28
Nup50-201ENSMUST00000165443 Eif4g2Q62448 906 aaKnown RBP13.32□□□□□ -0.28
Nup50-201ENSMUST00000165443 U2surpQ6NV83 1029 aaKnown RBP13.32□□□□□ -0.28
Nup50-201ENSMUST00000165443 PtprkP35822 1457 aa13.31□□□□□ -0.28
Nup50-201ENSMUST00000165443 Mrc2Q64449 1479 aa13.31□□□□□ -0.28
Nup50-201ENSMUST00000165443 Tnnt2P50752 301 aa13.31□□□□□ -0.28
Nup50-201ENSMUST00000165443 Rrp12Q6P5B0 1295 aaKnown RBP13.31□□□□□ -0.28
Nup50-201ENSMUST00000165443 Plekhh2Q8C115 1491 aa13.3□□□□□ -0.28
Nup50-201ENSMUST00000165443 PogzQ8BZH4 1409 aaKnown RBP13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 AampJ3QN89 436 aa13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 Smarce1O54941 411 aaKnown RBP13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 Atp6v1dP57746 247 aa13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 Rtn4Q99P72 1162 aaKnown RBP13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 Rsph4aQ8BYM7 716 aa13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 Cluap1Q8R3P7 413 aa13.29□□□□□ -0.28
Nup50-201ENSMUST00000165443 Mfap1aC0HKD8 439 aaKnown RBP13.28□□□□□ -0.28
Nup50-201ENSMUST00000165443 Mfap1bC0HKD9 439 aaKnown RBP13.28□□□□□ -0.28
Nup50-201ENSMUST00000165443 Duox2A2AQ99 1517 aa13.28□□□□□ -0.28
Nup50-201ENSMUST00000165443 Ddrgk1Q80WW9 315 aa13.28□□□□□ -0.28
Nup50-201ENSMUST00000165443 R3hcc1Q8BSI6 488 aa13.28□□□□□ -0.28
Nup50-201ENSMUST00000165443 Q3TQI7 289 aaKnown RBP13.27□□□□□ -0.29
Nup50-201ENSMUST00000165443 Cgnl1Q6AW69 1298 aa13.27□□□□□ -0.29
Nup50-201ENSMUST00000165443 Map3k1P53349 1493 aa13.27□□□□□ -0.29
Nup50-201ENSMUST00000165443 Pcmtd1P59913 357 aa13.27□□□□□ -0.29
Nup50-201ENSMUST00000165443 Ksr2Q3UVC0 959 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms