RNA–Protein interactions for RNA: ENSMUST00000164384.8

Scn9a-206, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-206ENSMUST00000164384 Ccdc18Q640L5 1455 aa6.73□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Nolc1E9Q5C9 702 aaKnown RBP6.73□□□□□ -1.33
Scn9a-206ENSMUST00000164384 PnnO35691 725 aaKnown RBP6.72□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Ubap1lG3UW59 384 aa6.72□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Gpatch11Q3UFS4 262 aa6.72□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Tpm2P58774 284 aa6.72□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Stard8Q8K031 1019 aa6.72□□□□□ -1.33
Scn9a-206ENSMUST00000164384 EspnQ9ET47 871 aa6.72□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Mrvi1Q9WUX5 899 aaKnown RBP6.71□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Wwc2Q6NXJ0 1187 aa6.71□□□□□ -1.33
Scn9a-206ENSMUST00000164384 Dusp9Q7TNL7 452 aa6.71□□□□□ -1.34
Scn9a-206ENSMUST00000164384 IqubQ8CDK3 788 aa6.71□□□□□ -1.34
Scn9a-206ENSMUST00000164384 BlmO88700 1416 aa6.7□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Pds5bQ4VA53 1446 aaKnown RBP6.7□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Taf3Q5HZG4 932 aa6.7□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Ipo8Q7TMY7 1010 aa6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 ChgaP26339 463 aaKnown RBP6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Pcmtd1P59913 357 aa6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Prm3Q62100 101 aa6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 KnstrnQ9D9Z1 312 aaKnown RBP6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Cald1E9QA15 768 aaKnown RBP6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Apbb1Q9QXJ1 710 aa6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Mre11Q61216 706 aa6.69□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Cspp1B2RX88 1205 aa6.68□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Kdm5dQ62240 1548 aa6.68□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Fbln2P37889 1221 aa6.68□□□□□ -1.34
Scn9a-206ENSMUST00000164384 AppP12023 770 aa6.68□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Bcl11bQ99PV8 884 aa6.67□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Chmp4bQ9D8B3 224 aaKnown RBP6.67□□□□□ -1.34
Scn9a-206ENSMUST00000164384 AcrbpQ3V140 540 aa6.67□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Setd5Q5XJV7 1441 aa6.67□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Ftsj3Q9DBE9 838 aaKnown RBP6.66□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Rwdd1Q9CQK7 243 aa6.66□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Anp32eP97822 260 aaKnown RBP6.66□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Cwc15Q9JHS9 229 aaKnown RBP6.66□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Zrsr2Q62377 462 aaKnown RBP6.65□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Fam13bQ8K2H3 851 aa6.65□□□□□ -1.34
Scn9a-206ENSMUST00000164384 Arid3cA6PWV5 409 aa6.65□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Rrp7aQ9D1C9 280 aaKnown RBP6.65□□□□□ -1.35
Scn9a-206ENSMUST00000164384 DmtnQ9WV69 405 aa6.65□□□□□ -1.35
Scn9a-206ENSMUST00000164384 MccE9PWI3 1003 aa6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Ralbp1Q62172 648 aa6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Znf526Q8BI66 675 aa6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Mapk8ip3Q9ESN9 1337 aa6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Kif3aP28741 701 aa6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Clstn1Q9EPL2 979 aa6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 HdgfP51859 237 aaKnown RBP6.64□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Ccdc34Q3UI66 367 aa6.63□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Srpk2O54781 681 aaKnown RBP6.63□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Exosc9Q9JHI7 438 aaKnown RBP6.63□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Eif4g2Q62448 906 aaKnown RBP6.63□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Armcx1Q9CX83 456 aa6.63□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Phf14Q9D4H9 881 aa6.63□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Gm6268A2A3U9 297 aa6.62□□□□□ -1.35
Scn9a-206ENSMUST00000164384 AknaQ80VW7 1404 aa6.62□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Vgll3P85442 326 aa6.62□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Pnmal2G3X9N3 661 aa6.62□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Sycp2Q9CUU3 1500 aa6.62□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Glipr1l2Q9CQ35 332 aa6.62□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Rsph3aQ3UFY4 516 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 BbxQ8VBW5 907 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 ScribQ80U72 1612 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Sart3Q9JLI8 962 aaKnown RBP6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Trim55G3X8Y1 545 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Kdm2aP59997 1161 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Tomm22Q9CPQ3 142 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Stk24Q99KH8 431 aa6.61□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Cwc22Q8C5N3 908 aaKnown RBP6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Rbm10Q99KG3 930 aaKnown RBP6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Neurod2Q62414 383 aa6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Pes1Q9EQ61 584 aaKnown RBP6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Arid4aF8VPQ2 1261 aaKnown RBP6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Hsp90b1P08113 802 aaKnown RBP6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Mroh3A0A1D5RM54 893 aa6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Rgl3Q3UYI5 709 aa6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Gm20521D3Z5F7 333 aa6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Ciz1Q8VEH2 845 aa6.6□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Psme1P97371 249 aa6.59□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Chrna2Q91X60 512 aa6.59□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Golga3P55937 1487 aa6.59□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Def6Q8C2K1 630 aa6.59□□□□□ -1.35
Scn9a-206ENSMUST00000164384 Gps2Q921N8 327 aa6.59□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Tpm3-rs7D3Z2H9 248 aa6.58□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Tpm3P21107 285 aaKnown RBP6.58□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Paf1Q8K2T8 535 aa6.58□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Mfap1aC0HKD8 439 aaKnown RBP6.58□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Mfap1bC0HKD9 439 aaKnown RBP6.58□□□□□ -1.36
Scn9a-206ENSMUST00000164384 CgnP59242 1191 aa6.58□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Pabpn1Q8CCS6 302 aaKnown RBP6.57□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Stag3O70576 1240 aa6.57□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Znf692Q3U381 531 aa6.57□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Tpd52l1O54818 204 aa6.57□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Aebp1Q640N1 1128 aa6.57□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Mtus2Q3UHD3 1353 aa6.57□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Mex3cQ05A36 652 aaKnown RBP6.56□□□□□ -1.36
Scn9a-206ENSMUST00000164384 R3hcc1Q8BSI6 488 aa6.56□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Lemd3Q9WU40 921 aa6.56□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Pip4k2bQ80XI4 416 aa6.56□□□□□ -1.36
Scn9a-206ENSMUST00000164384 Sf3a1Q8K4Z5 791 aaKnown RBP6.56□□□□□ -1.36
Scn9a-206ENSMUST00000164384 HnrnpuQ8VEK3 800 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms