RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Sin3aQ60520 1274 aaKnown RBP16.25■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Gtf2e1Q9D0D5 440 aa16.25■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Rtf1A2AQ19 715 aaKnown RBP16.25■□□□□ 0.19
Gm28043-201ENSMUST00000130871 PtmsQ9D0J8 101 aaKnown RBP16.25■□□□□ 0.19
Gm28043-201ENSMUST00000130871 EspnQ9ET47 871 aa16.24■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Tmf1B9EKI3 1091 aa16.24■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Ifit1bl1D3Z6F0 470 aa16.24■□□□□ 0.19
Gm28043-201ENSMUST00000130871 U2surpQ6NV83 1029 aaKnown RBP16.24■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Mak16Q8BGS0 296 aaKnown RBP16.24■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Sart3Q9JLI8 962 aaKnown RBP16.23■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Dnttip2Q8R2M2 758 aaKnown RBP16.23■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Erich6bQ9D4S6 220 aa16.22■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Trak1Q6PD31 939 aa16.22■□□□□ 0.19
Gm28043-201ENSMUST00000130871 U2af1Q9D883 239 aaKnown RBP16.22■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Tmco5bQ80X59 307 aa16.21■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Gm973E9Q295 1059 aa16.2■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Aebp1Q640N1 1128 aa16.2■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Rassf8Q8CJ96 419 aa16.2■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Pde3bQ61409 1100 aa16.19■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Plin1Q8CGN5 517 aa16.19■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Stk26Q99JT2 416 aa16.18■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Anapc15P60007 132 aa16.18■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Mphosph9A6H5Y1 991 aa16.18■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Bcl11aQ9QYE3 773 aa16.18■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Golga2Q921M4 999 aa16.17■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Cep162Q6ZQ06 1403 aa16.17■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Cabp1Q9JLK7 227 aa16.17■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Pcmtd1P59913 357 aa16.16■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Eif4g2Q62448 906 aaKnown RBP16.16■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Dcaf11Q91VU6 549 aa16.15■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Cluap1Q8R3P7 413 aa16.15■□□□□ 0.18
Gm28043-201ENSMUST00000130871 Fyco1Q8VDC1 1437 aa16.13■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Q3TQI7 289 aaKnown RBP16.13■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Ipo8Q7TMY7 1010 aa16.13■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Iffo2Q8R2V2 512 aa16.12■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Ipo9Q91YE6 1041 aa16.12■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Arid3cA6PWV5 409 aa16.12■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Birc3O08863 600 aa16.12■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Lemd3Q9WU40 921 aa16.11■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Ecm2Q5FW85 670 aa16.1■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Ccdc88bQ4QRL3 1481 aa16.1■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Znf330Q922H9 316 aa16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Srcin1Q9QWI6 1250 aa16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Mfap1aC0HKD8 439 aaKnown RBP16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Mfap1bC0HKD9 439 aaKnown RBP16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 MecomP14404 1042 aa16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 MsnP26041 577 aaKnown RBP16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Ppp1r18Q8BQ30 594 aa16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Calcoco2A2A6M5 331 aa16.09■□□□□ 0.17
Gm28043-201ENSMUST00000130871 CgnP59242 1191 aa16.08■□□□□ 0.17
Gm28043-201ENSMUST00000130871 Tnnt2P50752 301 aa16.07■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Nol10Q5RJG1 687 aaKnown RBP16.06■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Rock2P70336 1388 aa16.06■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Ksr2Q3UVC0 959 aa16.05■□□□□ 0.16
Gm28043-201ENSMUST00000130871 CrbnQ8C7D2 445 aa16.05■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Tnnt1O88346 262 aa16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Fmn1Q05860 1466 aa16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 CntlnA2AM05 1397 aa16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Spag9Q58A65 1321 aaKnown RBP16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 GorabQ8BRM2 368 aa16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Arhgap35Q91YM2 1499 aa16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Znf316Q6PGE4 1016 aa16.04■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Baz1bQ9Z277 1479 aa16.03■□□□□ 0.16
Gm28043-201ENSMUST00000130871 AknaQ80VW7 1404 aa16.03■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Rpap1Q80TE0 1409 aa16.03■□□□□ 0.16
Gm28043-201ENSMUST00000130871 R3hcc1Q8BSI6 488 aa16.02■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Ccar1Q8CH18 1146 aaKnown RBP16.02■□□□□ 0.16
Gm28043-201ENSMUST00000130871 Dnai2A2AC93 623 aa16.01■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Psme1P97371 249 aa16.01■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Slc4a1apE9PX68 744 aa16■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Tpm3-rs7D3Z2H9 248 aa16■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Nup155Q99P88 1391 aaKnown RBP15.99■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Txndc2Q6P902 515 aa15.99■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Smarce1O54941 411 aaKnown RBP15.99■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Kif3bQ61771 747 aa15.99■□□□□ 0.15
Gm28043-201ENSMUST00000130871 CrebrfQ8CDG5 640 aaKnown RBP15.98■□□□□ 0.15
Gm28043-201ENSMUST00000130871 HdgfP51859 237 aaKnown RBP15.98■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Sox12Q04890 314 aa15.98■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Brpf1B2RRD7 1212 aa15.97■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Stard8Q8K031 1019 aa15.97■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Senp3Q9EP97 568 aaKnown RBP15.97■□□□□ 0.15
Gm28043-201ENSMUST00000130871 RdxP26043 583 aaKnown RBP15.96■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Atp6v1dP57746 247 aa15.96■□□□□ 0.15
Gm28043-201ENSMUST00000130871 Kdm5dQ62240 1548 aa15.95■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Rrp12Q6P5B0 1295 aaKnown RBP15.95■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Pibf1E9Q6K3 756 aa15.95■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Pds5bQ4VA53 1446 aaKnown RBP15.95■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Ggt6Q6PDE7 497 aa15.94■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Dhx57Q6P5D3 1388 aaKnown RBP15.93■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Chmp3Q9CQ10 224 aa15.93■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Fan1Q69ZT1 1020 aa15.92■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Cald1E9QA15 768 aaKnown RBP15.92■□□□□ 0.14
Gm28043-201ENSMUST00000130871 SlkO54988 1233 aa15.92■□□□□ 0.14
Gm28043-201ENSMUST00000130871 ChgaP26339 463 aaKnown RBP15.91■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Tsen2Q6P7W5 460 aa15.91■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Cgnl1Q6AW69 1298 aa15.9■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Kiaa0754Q69ZZ9 979 aa15.9■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Ccdc146E9Q9F7 977 aa15.9■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Q8BT18 775 aa15.9■□□□□ 0.14
Gm28043-201ENSMUST00000130871 Plekhh2Q8C115 1491 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms