RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Kiaa1551Q5DTW7 1521 aa31.86■■■□□ 2.69
Ccdc88a-202ENSMUST00000109477 Cdc42bpaQ3UU96 1719 aa31.86■■■□□ 2.69
Ccdc88a-202ENSMUST00000109477 Prex2Q3LAC4 1598 aa31.86■■■□□ 2.69
Ccdc88a-202ENSMUST00000109477 Ccnb3Q810T2 1396 aa31.84■■■□□ 2.69
Ccdc88a-202ENSMUST00000109477 Arid3cA6PWV5 409 aa31.83■■■□□ 2.69
Ccdc88a-202ENSMUST00000109477 Mapkbp1Q6NS57 1503 aa31.82■■■□□ 2.68
Ccdc88a-202ENSMUST00000109477 3425401B19RikD3Z1D3 1412 aa31.82■■■□□ 2.68
Ccdc88a-202ENSMUST00000109477 Abca8bQ8K440 1620 aa31.75■■■□□ 2.67
Ccdc88a-202ENSMUST00000109477 Ppp1r18Q8BQ30 594 aa31.71■■■□□ 2.67
Ccdc88a-202ENSMUST00000109477 Clasp1Q80TV8 1535 aaKnown RBP31.7■■■□□ 2.66
Ccdc88a-202ENSMUST00000109477 Fam208aQ69ZR9 1610 aaKnown RBP31.69■■■□□ 2.66
Ccdc88a-202ENSMUST00000109477 NefmP08553 848 aa31.65■■■□□ 2.66
Ccdc88a-202ENSMUST00000109477 A2mQ6GQT1 1474 aa31.61■■■□□ 2.65
Ccdc88a-202ENSMUST00000109477 Adcy10Q8C0T9 1614 aa31.58■■■□□ 2.65
Ccdc88a-202ENSMUST00000109477 Fam50aQ9WV03 339 aaKnown RBP31.55■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Ttc37F8VPK0 1563 aa31.54■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Zfyve16Q80U44 1528 aa31.54■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Naip2Q9QUK4 1447 aa31.54■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Arhgef40Q3UPH7 1517 aa31.52■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Depdc5P61460 1591 aa31.52■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Mia2Q91ZV0 1396 aa31.52■■■□□ 2.64
Ccdc88a-202ENSMUST00000109477 Mlh3A0A1Y7VMP7 1443 aa31.51■■■□□ 2.63
Ccdc88a-202ENSMUST00000109477 Rnf17Q99MV7 1640 aa31.5■■■□□ 2.63
Ccdc88a-202ENSMUST00000109477 Fhad1A6PWD2 1420 aa31.47■■■□□ 2.63
Ccdc88a-202ENSMUST00000109477 Pcdh10E9PXQ7 1057 aa31.46■■■□□ 2.63
Ccdc88a-202ENSMUST00000109477 Arhgap5P97393 1501 aa31.45■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Kdm6bQ5NCY0 1641 aa31.44■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 AglF8VPN4 1532 aa31.43■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Caskin1Q6P9K8 1431 aa31.43■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 UacaQ8CGB3 1411 aa31.42■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Tdrd9Q14BI7 1383 aa31.42■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Vps8Q0P5W1 1427 aa31.41■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Plekhh2Q8C115 1491 aa31.4■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Abcc5Q9R1X5 1436 aa31.39■■■□□ 2.62
Ccdc88a-202ENSMUST00000109477 Cdk11bP24788 784 aaKnown RBP31.35■■■□□ 2.61
Ccdc88a-202ENSMUST00000109477 Abca9Q8K449 1623 aa31.35■■■□□ 2.61
Ccdc88a-202ENSMUST00000109477 AdgbG3UZ78 1657 aa31.34■■■□□ 2.61
Ccdc88a-202ENSMUST00000109477 Mtus2Q3UHD3 1353 aa31.31■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Rfx7F8VPJ6 1459 aa31.31■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Gm32742A0A1B0GT42 1604 aa31.31■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Chic2Q9D9G3 165 aa31.31■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Trappc8E9PWG2 1437 aa31.3■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Pdcd11Q6NS46 1862 aaKnown RBP31.29■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Cfap74Q3UY96 1578 aa31.28■■■□□ 2.6
Ccdc88a-202ENSMUST00000109477 Abcc3B2RX12 1523 aa31.25■■■□□ 2.59
Ccdc88a-202ENSMUST00000109477 Cabp1Q9JLK7 227 aa31.24■■■□□ 2.59
Ccdc88a-202ENSMUST00000109477 Kidins220E9Q9B7 1793 aa31.22■■■□□ 2.59
Ccdc88a-202ENSMUST00000109477 Il16O54824 1322 aa31.22■■■□□ 2.59
Ccdc88a-202ENSMUST00000109477 Ccer2J3QPU5 274 aa31.21■■■□□ 2.59
Ccdc88a-202ENSMUST00000109477 Fndc1E9Q043 1732 aa31.18■■■□□ 2.58
Ccdc88a-202ENSMUST00000109477 Kdm3bQ6ZPY7 1562 aa31.18■■■□□ 2.58
Ccdc88a-202ENSMUST00000109477 SphkapQ6NSW3 1687 aa31.17■■■□□ 2.58
Ccdc88a-202ENSMUST00000109477 Dennd4bQ3U1Y4 1499 aa31.17■■■□□ 2.58
Ccdc88a-202ENSMUST00000109477 Lemd3Q9WU40 921 aa31.15■■■□□ 2.58
Ccdc88a-202ENSMUST00000109477 Sart1Q9Z315 806 aaKnown RBP31.15■■■□□ 2.58
Ccdc88a-202ENSMUST00000109477 NclP09405 707 aaKnown RBP31.13■■■□□ 2.57
Ccdc88a-202ENSMUST00000109477 Fhod3Q76LL6 1578 aa31.1■■■□□ 2.57
Ccdc88a-202ENSMUST00000109477 Kiaa0556Q8C753 1610 aa31.08■■■□□ 2.57
Ccdc88a-202ENSMUST00000109477 Fmn2Q9JL04 1578 aa31.07■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 Adgrb2Q8CGM1 1561 aa31.07■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 OvosQ3UU35 1456 aa31.06■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 Hecw1Q8K4P8 1604 aa31.05■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 Ankrd36D3Z4K0 1415 aa31.03■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 Cdc42bpbQ7TT50 1713 aa31.03■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 Ube2uB1AUC4 352 aa31.02■■■□□ 2.56
Ccdc88a-202ENSMUST00000109477 Mast1Q9R1L5 1570 aa31.01■■■□□ 2.55
Ccdc88a-202ENSMUST00000109477 Synj2Q9D2G5 1434 aa30.99■■■□□ 2.55
Ccdc88a-202ENSMUST00000109477 Kdm5cP41230 1554 aa30.98■■■□□ 2.55
Ccdc88a-202ENSMUST00000109477 Neurl4Q5NCX5 1563 aa30.98■■■□□ 2.55
Ccdc88a-202ENSMUST00000109477 Eid3Q3V124 375 aa30.98■■■□□ 2.55
Ccdc88a-202ENSMUST00000109477 TonslQ6NZL6 1363 aa30.97■■■□□ 2.55
Ccdc88a-202ENSMUST00000109477 Adgrl2Q8JZZ7 1487 aa30.95■■■□□ 2.54
Ccdc88a-202ENSMUST00000109477 Hecw2Q6I6G8 1578 aa30.94■■■□□ 2.54
Ccdc88a-202ENSMUST00000109477 Ptch1Q61115 1434 aa30.92■■■□□ 2.54
Ccdc88a-202ENSMUST00000109477 AlkP97793 1621 aa30.9■■■□□ 2.54
Ccdc88a-202ENSMUST00000109477 Atp10aO54827 1508 aa30.9■■■□□ 2.54
Ccdc88a-202ENSMUST00000109477 Rrp7aQ9D1C9 280 aaKnown RBP30.9■■■□□ 2.54
Ccdc88a-202ENSMUST00000109477 Dnajc5gQ8C632 165 aa30.88■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 Map3k5O35099 1380 aa30.88■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 Prdm16A2A935 1275 aa30.87■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 Las1lA2BE28 776 aaKnown RBP30.87■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 Lamc1P02468 1607 aaKnown RBP30.85■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 Dip2cE9PWR4 1557 aa30.84■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 RereQ80TZ9 1558 aa30.83■■■□□ 2.53
Ccdc88a-202ENSMUST00000109477 Zfp644E9QA22 1323 aa30.82■■■□□ 2.52
Ccdc88a-202ENSMUST00000109477 Mphosph9A6H5Y1 991 aa30.81■■■□□ 2.52
Ccdc88a-202ENSMUST00000109477 Yeats2Q3TUF7 1407 aa30.81■■■□□ 2.52
Ccdc88a-202ENSMUST00000109477 Nos1Q9Z0J4 1429 aa30.81■■■□□ 2.52
Ccdc88a-202ENSMUST00000109477 Kif21bQ9QXL1 1668 aa30.8■■■□□ 2.52
Ccdc88a-202ENSMUST00000109477 Trpm2Q91YD4 1506 aa30.78■■■□□ 2.52
Ccdc88a-202ENSMUST00000109477 Cul9Q80TT8 1865 aa30.76■■■□□ 2.51
Ccdc88a-202ENSMUST00000109477 Plppr3Q7TPB0 716 aa30.73■■■□□ 2.51
Ccdc88a-202ENSMUST00000109477 Ssh2Q5SW75 1423 aa30.73■■■□□ 2.51
Ccdc88a-202ENSMUST00000109477 Nup155Q99P88 1391 aaKnown RBP30.7■■■□□ 2.5
Ccdc88a-202ENSMUST00000109477 Supt6hQ62383 1726 aaKnown RBP30.69■■■□□ 2.5
Ccdc88a-202ENSMUST00000109477 Xrn1P97789 1719 aaKnown RBP30.69■■■□□ 2.5
Ccdc88a-202ENSMUST00000109477 Qser1A2BIE1 1698 aa30.66■■■□□ 2.5
Ccdc88a-202ENSMUST00000109477 Cdc42bpgQ80UW5 1551 aa30.66■■■□□ 2.5
Ccdc88a-202ENSMUST00000109477 Znf518aB2RRF6 1478 aaKnown RBP30.65■■■□□ 2.5
Ccdc88a-202ENSMUST00000109477 Spag9Q58A65 1321 aaKnown RBP30.65■■■□□ 2.5
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms