RNA–Protein interactions for RNA: ENSMUST00000086430.4

Col5a2-201, Transcript of Collagen alpha-2(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a2, Length 6,625 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2-201ENSMUST00000086430 SlkO54988 1233 aa13.43□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Hspa5P20029 655 aaKnown RBP13.43□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Chmp5Q9D7S9 219 aa13.43□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Calcoco2A2A6M5 331 aa13.42□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Chmp4bQ9D8B3 224 aaKnown RBP13.42□□□□□ -0.26
Col5a2-201ENSMUST00000086430 ChgaP26339 463 aaKnown RBP13.42□□□□□ -0.26
Col5a2-201ENSMUST00000086430 IbspQ61711 324 aa13.41□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Tnnt1O88346 262 aa13.41□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Iqcf3Q9D498 203 aa13.41□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Kif15Q6P9L6 1387 aa13.41□□□□□ -0.26
Col5a2-201ENSMUST00000086430 GorabQ8BRM2 368 aa13.41□□□□□ -0.26
Col5a2-201ENSMUST00000086430 EspnQ9ET47 871 aa13.4□□□□□ -0.26
Col5a2-201ENSMUST00000086430 Gm973E9Q295 1059 aa13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Tmco5bQ80X59 307 aa13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 CrebrfQ8CDG5 640 aaKnown RBP13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Exoc6Q8R313 802 aa13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Ubap1lG3UW59 384 aa13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Sin3aQ60520 1274 aaKnown RBP13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Rrp12Q6P5B0 1295 aaKnown RBP13.39□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Samd1D3YXK1 519 aa13.38□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Podxl2Q8CAE9 603 aa13.38□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Iffo2Q8R2V2 512 aa13.38□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Mbd3Q9Z2D8 285 aaKnown RBP13.37□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Eea1Q8BL66 1411 aa13.36□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Ipo8Q7TMY7 1010 aa13.36□□□□□ -0.27
Col5a2-201ENSMUST00000086430 SetQ9EQU5 289 aaKnown RBP13.35□□□□□ -0.27
Col5a2-201ENSMUST00000086430 HnrnpuQ8VEK3 800 aaKnown RBP13.34□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Rundc1Q0VDN7 615 aa13.34□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Mtus2Q3UHD3 1353 aa13.33□□□□□ -0.27
Col5a2-201ENSMUST00000086430 Golga3P55937 1487 aa13.33□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Gtf3c3Q3TMP1 882 aa13.33□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Nolc1E9Q5C9 702 aaKnown RBP13.33□□□□□ -0.28
Col5a2-201ENSMUST00000086430 RdxP26043 583 aaKnown RBP13.33□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Rtf1A2AQ19 715 aaKnown RBP13.32□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Stk26Q99JT2 416 aa13.32□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Cald1E9QA15 768 aaKnown RBP13.32□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Trim30aP15533 496 aa13.32□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Arid4aF8VPQ2 1261 aaKnown RBP13.31□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Q8BT18 775 aa13.3□□□□□ -0.28
Col5a2-201ENSMUST00000086430 CrbnQ8C7D2 445 aa13.3□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Tomm22Q9CPQ3 142 aa13.3□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Isy1Q69ZQ2 285 aaKnown RBP13.3□□□□□ -0.28
Col5a2-201ENSMUST00000086430 MecomP14404 1042 aa13.3□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Rsf1E9PWW9 1441 aaKnown RBP13.29□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Ppp1r18Q8BQ30 594 aa13.28□□□□□ -0.28
Col5a2-201ENSMUST00000086430 U2af1Q9D883 239 aaKnown RBP13.28□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Pibf1E9Q6K3 756 aa13.27□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Prm3Q62100 101 aa13.27□□□□□ -0.28
Col5a2-201ENSMUST00000086430 Ercc6F8VPZ5 1481 aa13.27□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Brpf1B2RRD7 1212 aa13.27□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Tpm3-rs7D3Z2H9 248 aa13.27□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Sart3Q9JLI8 962 aaKnown RBP13.27□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Ccdc18Q640L5 1455 aa13.27□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Ifit1bl1D3Z6F0 470 aa13.26□□□□□ -0.29
Col5a2-201ENSMUST00000086430 PtmsQ9D0J8 101 aaKnown RBP13.26□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Birc3O08863 600 aa13.26□□□□□ -0.29
Col5a2-201ENSMUST00000086430 BccipQ9CWI3 316 aa13.25□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Fhad1A6PWD2 1420 aa13.25□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Q3TQI7 289 aaKnown RBP13.25□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Drc7Q6V3W6 876 aa13.24□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Golga2Q921M4 999 aa13.24□□□□□ -0.29
Col5a2-201ENSMUST00000086430 VgfQ0VGU4 617 aa13.23□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Noc3lQ8VI84 807 aaKnown RBP13.23□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Becn1O88597 448 aa13.23□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Baz1aO88379 1555 aa13.23□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Sox12Q04890 314 aa13.23□□□□□ -0.29
Col5a2-201ENSMUST00000086430 R3hcc1Q8BSI6 488 aa13.23□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Dcaf11Q91VU6 549 aa13.22□□□□□ -0.29
Col5a2-201ENSMUST00000086430 NacadQ5SWP3 1504 aa13.22□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Tmf1B9EKI3 1091 aa13.22□□□□□ -0.29
Col5a2-201ENSMUST00000086430 PrkcshO08795 521 aa13.21□□□□□ -0.29
Col5a2-201ENSMUST00000086430 Pkd2O35245 966 aa13.21□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Nol10Q5RJG1 687 aaKnown RBP13.21□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ccdc146E9Q9F7 977 aa13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Fam193aQ8CGI1 1231 aaKnown RBP13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ftsj3Q9DBE9 838 aaKnown RBP13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Fbxo2Q80UW2 297 aa13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ddrgk1Q80WW9 315 aa13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ksr2Q3UVC0 959 aa13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Zscan21Q07231 555 aa13.2□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Tpd52l1O54818 204 aa13.19□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Pknox2Q8BG99 474 aa13.19□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Chmp3Q9CQ10 224 aa13.19□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ccer1Q9CQL2 403 aa13.19□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Tpm3P21107 285 aaKnown RBP13.18□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Mia2Q91ZV0 1396 aa13.18□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Gtf2e1Q9D0D5 440 aa13.18□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ggt6Q6PDE7 497 aa13.18□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Smarce1O54941 411 aaKnown RBP13.18□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ncbp3Q8BZR9 615 aaKnown RBP13.17□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Sf3a1Q8K4Z5 791 aaKnown RBP13.17□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Arid3cA6PWV5 409 aa13.17□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Vps53Q8CCB4 832 aa13.17□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Map4P27546 1125 aaKnown RBP13.16□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Polr3gQ6NXY9 223 aa13.16□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Ipo4Q8VI75 1082 aa13.16□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Chmp4cQ9D7F7 232 aa13.16□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Map7d2A2AG50 781 aa13.15□□□□□ -0.3
Col5a2-201ENSMUST00000086430 Rfx1P48377 963 aa13.14□□□□□ -0.31
Col5a2-201ENSMUST00000086430 Ush1cQ9ES64 910 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms