RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Dhx30Q99PU8 1217 aaKnown RBP12.73□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 CadpsQ80TJ1 1355 aa12.73□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 PnisrA2AJT4 805 aaKnown RBP12.72□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 Lekr1B2RVN1 116 aa12.72□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 Tnnt2P50752 301 aa12.72□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 CntlnA2AM05 1397 aa12.71□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 Ttll13A4Q9F6 804 aa12.71□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 Dhx57Q6P5D3 1388 aaKnown RBP12.71□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 Htatsf1Q8BGC0 757 aa12.71□□□□□ -0.37
Hmgb1-201ENSMUST00000085546 Kank1E9Q238 1360 aa12.71□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Ofd1Q80Z25 1017 aa12.7□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Fhad1A6PWD2 1420 aa12.7□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 CftrP26361 1476 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 IbspQ61711 324 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Arap1Q4LDD4 1452 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Sycp2Q9CUU3 1500 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Arhgef5E9Q7D5 1581 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 NudcO35685 332 aaKnown RBP12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Trim26Q99PN3 545 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Unc13aQ4KUS2 1712 aa12.69□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Naip5Q9R016 1403 aa12.68□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Smarca4Q3TKT4 1613 aaKnown RBP12.67□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Hspa5P20029 655 aaKnown RBP12.67□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Sox12Q04890 314 aa12.67□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Exoc6Q8R313 802 aa12.67□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Thoc2B1AZI6 1594 aaKnown RBP12.66□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Ncoa1P70365 1447 aa12.66□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Mia2Q91ZV0 1396 aa12.66□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Ddrgk1Q80WW9 315 aa12.66□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Cecr2E9Q2Z1 1453 aa12.65□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Zbtb7cQ8VCZ7 619 aa12.65□□□□□ -0.38
Hmgb1-201ENSMUST00000085546 Zmym3Q9JLM4 1370 aa12.64□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Wwc2Q6NXJ0 1187 aa12.64□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Dhx29Q6PGC1 1365 aaKnown RBP12.62□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Erbb3Q61526 1339 aa12.62□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Ube2q2Q8K2Z8 378 aa12.61□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Dnajc14Q921R4 703 aa12.61□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Ripk4Q9ERK0 786 aa12.61□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Tiam1Q60610 1591 aa12.61□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Rsph4aQ8BYM7 716 aa12.61□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Tmc1Q8R4P5 757 aa12.61□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Cul7Q8VE73 1689 aa12.6□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Tmem132aQ922P8 1018 aa12.6□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Chmp4bQ9D8B3 224 aaKnown RBP12.6□□□□□ -0.39
Hmgb1-201ENSMUST00000085546 Pdia4P08003 638 aaKnown RBP12.57□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Gse1Q3U3C9 1213 aa12.57□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Ppp1r9bQ6R891 817 aaKnown RBP12.57□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Vps8Q0P5W1 1427 aa12.57□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Disp1Q3TDN0 1521 aa12.57□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Isy1Q69ZQ2 285 aaKnown RBP12.56□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Fbxo2Q80UW2 297 aa12.56□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Mbd3Q9Z2D8 285 aaKnown RBP12.56□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Crocc2F6XLV1 1638 aa12.55□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Fbxo3Q9DC63 480 aa12.55□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Il4rP16382 810 aa12.55□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Kdm2bQ6P1G2 1309 aa12.54□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Znf326O88291 580 aa12.54□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Eif2s2Q99L45 331 aaKnown RBP12.53□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Antxr1Q9CZ52 562 aa12.53□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Arhgap35Q91YM2 1499 aa12.53□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Abca5Q8K448 1642 aa12.53□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Trim44Q9QXA7 346 aa12.52□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Map3k1P53349 1493 aa12.52□□□□□ -0.4
Hmgb1-201ENSMUST00000085546 Gys2Q8VCB3 704 aa12.52□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Erbb4Q61527 1308 aa12.51□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Mcm4P49717 862 aa12.51□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 VgfQ0VGU4 617 aa12.51□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 B4galnt3Q6L8S8 986 aa12.51□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Peg3Q3URU2 1571 aa12.51□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Stac3Q8BZ71 360 aa12.5□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Erich3F6QRE9 1637 aa12.5□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Kiaa0753Q6A000 959 aa12.5□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Pdcl2Q78Y63 240 aa12.5□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Dhx16G3X8X0 1044 aaKnown RBP12.49□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Ipo8Q7TMY7 1010 aa12.49□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Rock2P70336 1388 aa12.48□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Spryd3E9Q9B3 442 aa12.48□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Npm2Q80W85 207 aa12.48□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Fhod3Q76LL6 1578 aa12.47□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Hsp90ab1P11499 724 aaKnown RBP12.46□□□□□ -0.41
Hmgb1-201ENSMUST00000085546 Chmp5Q9D7S9 219 aa12.46□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Naip1Q9QWK5 1403 aa12.45□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Esf1Q3V1V3 845 aaKnown RBP12.45□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Fam50aQ9WV03 339 aaKnown RBP12.44□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Setd5Q5XJV7 1441 aa12.44□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 NrkQ9R0G8 1455 aa12.44□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Kif21bQ9QXL1 1668 aa12.44□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Mknk2Q8CDB0 459 aa12.44□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Arhgef12Q8R4H2 1543 aaKnown RBP12.43□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Ttc41Q692V3 1318 aa12.43□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Ccdc94Q9D6J3 314 aa12.43□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Mapk8ip3Q9ESN9 1337 aa12.42□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 4930567H17RikQ3V0K5 233 aa12.42□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Ak7Q9D2H2 614 aa12.42□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 SynmQ70IV5 1561 aa12.42□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Mtus2Q3UHD3 1353 aa12.42□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 FanciQ8K368 1330 aa12.42□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Gm6268A2A3U9 297 aa12.41□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Smc5Q8CG46 1101 aaKnown RBP12.41□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 BbxQ8VBW5 907 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms