RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Samd9lQ69Z37 1561 aa13.44□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Igf1rQ60751 1373 aa13.43□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Unc13aQ4KUS2 1712 aa13.43□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Plekhh2Q8C115 1491 aa13.42□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Stk24Q99KH8 431 aa13.4□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Ythdc2B2RR83 1445 aaKnown RBP13.4□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Rgl3Q3UYI5 709 aa13.4□□□□□ -0.26
Cpsf1-201ENSMUST00000071898 Rsph4aQ8BYM7 716 aa13.4□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Nup160Q9Z0W3 1402 aaKnown RBP13.39□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Mroh3A0A1D5RM54 893 aa13.38□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Fam163aQ8CAA5 168 aa13.38□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Pla2r1Q62028 1487 aa13.37□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Rusc2Q80U22 1514 aa13.37□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Hspa5P20029 655 aaKnown RBP13.37□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Gapvd1Q6PAR5 1458 aa13.35□□□□□ -0.27
Cpsf1-201ENSMUST00000071898 Cux1P53564 1515 aa13.33□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Kdm2aP59997 1161 aa13.32□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Naip1Q9QWK5 1403 aa13.32□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Arhgap5P97393 1501 aa13.32□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Ppp4r2Q0VGB7 417 aa13.32□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Prdm10Q3UTQ7 1184 aa13.31□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 PxdnQ3UQ28 1475 aa13.31□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Arap1Q4LDD4 1452 aa13.31□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Abcc1O35379 1528 aa13.31□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Ythdc1E9Q5K9 736 aaKnown RBP13.31□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Trak1Q6PD31 939 aa13.31□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Srpk2O54781 681 aaKnown RBP13.3□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Nlrp6Q91WS2 869 aa13.3□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Magi3Q9EQJ9 1476 aa13.3□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Spag9Q58A65 1321 aaKnown RBP13.3□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Nup155Q99P88 1391 aaKnown RBP13.3□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Arid4bA2CG63 1314 aaKnown RBP13.29□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Eif4g3Q80XI3 1579 aaKnown RBP13.29□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 WizO88286 1684 aaKnown RBP13.29□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Grwd1Q810D6 446 aaKnown RBP13.29□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Arhgef5E9Q7D5 1581 aa13.28□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Magi1Q6RHR9 1471 aa13.28□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 UacaQ8CGB3 1411 aa13.27□□□□□ -0.28
Cpsf1-201ENSMUST00000071898 Wdr43Q6ZQL4 677 aaKnown RBP13.27□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Pbrm1Q8BSQ9 1634 aaKnown RBP13.26□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Pkd2O35245 966 aa13.26□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Atp10dQ8K2X1 1416 aa13.26□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Gm20521D3Z5F7 333 aa13.26□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 IqubQ8CDK3 788 aa13.26□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 A2mQ6GQT1 1474 aa13.25□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 PrkcshO08795 521 aa13.25□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Prdm16A2A935 1275 aa13.25□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Mug1P28665 1476 aa13.24□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Txndc2Q6P902 515 aa13.24□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Shroom2A2ALU4 1481 aa13.24□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Mphosph9A6H5Y1 991 aa13.23□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Gpatch8A2A6A1 1505 aa13.23□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Map3k5O35099 1380 aa13.23□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Rad21Q61550 635 aaKnown RBP13.22□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 SafbD3YXK2 937 aaKnown RBP13.21□□□□□ -0.29
Cpsf1-201ENSMUST00000071898 Psme1P97371 249 aa13.21□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Ccdc9Q8VC31 543 aaKnown RBP13.2□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Upf2A2AT37 1269 aaKnown RBP13.2□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Card11Q8CIS0 1159 aa13.19□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Cwc22Q8C5N3 908 aaKnown RBP13.19□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Pcf11G3X9Z4 1553 aa13.19□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Sin3aQ60520 1274 aaKnown RBP13.18□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Adgrl3Q80TS3 1537 aa13.18□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Ankrd26Q811D2 1581 aa13.17□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Pknox2Q8BG99 474 aa13.17□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Fam71e1A1L3C1 212 aa13.17□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Tiam1Q60610 1591 aa13.17□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Ofd1Q80Z25 1017 aa13.17□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Fancd2Q80V62 1450 aa13.17□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 Polr3glQ8R0C0 218 aa13.16□□□□□ -0.3
Cpsf1-201ENSMUST00000071898 NexmifQ5DTT1 1515 aa13.14□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Stag3O70576 1240 aa13.14□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Afap1Q80YS6 731 aa13.14□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Pde4cQ3UEI1 686 aa13.13□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Wwc2Q6NXJ0 1187 aa13.12□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Ifit1bl1D3Z6F0 470 aa13.12□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Arhgef12Q8R4H2 1543 aaKnown RBP13.11□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 DaxxO35613 739 aa13.11□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Wdr7Q920I9 1489 aa13.11□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Dnajc5P60904 198 aa13.11□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Exosc9Q9JHI7 438 aaKnown RBP13.11□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Stk26Q99JT2 416 aa13.1□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 OvosQ3UU35 1456 aa13.09□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Ncoa3O09000 1398 aa13.09□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 NgefQ8CHT1 710 aa13.09□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Mlh3A0A1Y7VMP7 1443 aa13.09□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Cyb5rlB1AS42 316 aa13.09□□□□□ -0.31
Cpsf1-201ENSMUST00000071898 Nsd2Q8BVE8 1365 aa13.08□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Rapgef6Q5NCJ1 1609 aa13.08□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 AI481877A2ALV5 1481 aa13.06□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Caskin1Q6P9K8 1431 aa13.06□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Rundc1Q0VDN7 615 aa13.05□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Adamts12Q811B3 1600 aa13.05□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Ncapd3Q6ZQK0 1506 aa13.04□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Pip4k2bQ80XI4 416 aa13.04□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Il16O54824 1322 aa13.04□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Exoc6Q8R313 802 aa13.03□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Fhad1A6PWD2 1420 aa13.03□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 Zfp644E9QA22 1323 aa13.03□□□□□ -0.32
Cpsf1-201ENSMUST00000071898 ErbinQ80TH2 1402 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 133.2 ms