RNA–Protein interactions for RNA: ENSMUST00000063905.11

Clip1-202, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 4,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-202ENSMUST00000063905 Prex2Q3LAC4 1598 aa15.84■□□□□ 0.13
Clip1-202ENSMUST00000063905 Abcc1O35379 1528 aa15.84■□□□□ 0.13
Clip1-202ENSMUST00000063905 Plekhh2Q8C115 1491 aa15.84■□□□□ 0.13
Clip1-202ENSMUST00000063905 Kiaa1551Q5DTW7 1521 aa15.83■□□□□ 0.13
Clip1-202ENSMUST00000063905 Abcc5Q9R1X5 1436 aa15.83■□□□□ 0.12
Clip1-202ENSMUST00000063905 Zcchc11B2RX14 1644 aaKnown RBP15.83■□□□□ 0.12
Clip1-202ENSMUST00000063905 Aebp2Q9Z248 504 aaKnown RBP15.82■□□□□ 0.12
Clip1-202ENSMUST00000063905 Cdc42bpaQ3UU96 1719 aa15.81■□□□□ 0.12
Clip1-202ENSMUST00000063905 Tdrd9Q14BI7 1383 aa15.81■□□□□ 0.12
Clip1-202ENSMUST00000063905 Rrbp1Q99PL5 1605 aaKnown RBP15.81■□□□□ 0.12
Clip1-202ENSMUST00000063905 Mapkbp1Q6NS57 1503 aa15.8■□□□□ 0.12
Clip1-202ENSMUST00000063905 Adcy10Q8C0T9 1614 aa15.79■□□□□ 0.12
Clip1-202ENSMUST00000063905 Fancd2Q80V62 1450 aa15.79■□□□□ 0.12
Clip1-202ENSMUST00000063905 Sall2Q9QX96 1004 aa15.77■□□□□ 0.12
Clip1-202ENSMUST00000063905 Nop58Q6DFW4 536 aaKnown RBP15.77■□□□□ 0.11
Clip1-202ENSMUST00000063905 Kdm6bQ5NCY0 1641 aa15.75■□□□□ 0.11
Clip1-202ENSMUST00000063905 Hspa5P20029 655 aaKnown RBP15.75■□□□□ 0.11
Clip1-202ENSMUST00000063905 Pabpn1Q8CCS6 302 aaKnown RBP15.74■□□□□ 0.11
Clip1-202ENSMUST00000063905 Mlh3A0A1Y7VMP7 1443 aa15.73■□□□□ 0.11
Clip1-202ENSMUST00000063905 Ppargc1bQ8VHJ7 1014 aa15.73■□□□□ 0.11
Clip1-202ENSMUST00000063905 Ythdc2B2RR83 1445 aaKnown RBP15.72■□□□□ 0.11
Clip1-202ENSMUST00000063905 Zfp644E9QA22 1323 aa15.72■□□□□ 0.11
Clip1-202ENSMUST00000063905 Ankrd36D3Z4K0 1415 aa15.72■□□□□ 0.11
Clip1-202ENSMUST00000063905 Rfx7F8VPJ6 1459 aa15.72■□□□□ 0.11
Clip1-202ENSMUST00000063905 Dennd4bQ3U1Y4 1499 aa15.72■□□□□ 0.11
Clip1-202ENSMUST00000063905 Mphosph9A6H5Y1 991 aa15.71■□□□□ 0.11
Clip1-202ENSMUST00000063905 Il16O54824 1322 aa15.71■□□□□ 0.11
Clip1-202ENSMUST00000063905 Stra8P70278 393 aa15.71■□□□□ 0.1
Clip1-202ENSMUST00000063905 Chd1P40201 1711 aa15.7■□□□□ 0.1
Clip1-202ENSMUST00000063905 Caskin1Q6P9K8 1431 aa15.68■□□□□ 0.1
Clip1-202ENSMUST00000063905 Arhgap5P97393 1501 aa15.66■□□□□ 0.1
Clip1-202ENSMUST00000063905 Neurod1Q60867 357 aa15.66■□□□□ 0.1
Clip1-202ENSMUST00000063905 ClspnQ80YR7 1315 aa15.66■□□□□ 0.1
Clip1-202ENSMUST00000063905 Atp10dQ8K2X1 1416 aa15.65■□□□□ 0.1
Clip1-202ENSMUST00000063905 Arid3cA6PWV5 409 aa15.65■□□□□ 0.1
Clip1-202ENSMUST00000063905 Adgrb2Q8CGM1 1561 aa15.65■□□□□ 0.1
Clip1-202ENSMUST00000063905 Zbtb7cQ8VCZ7 619 aa15.65■□□□□ 0.1
Clip1-202ENSMUST00000063905 Igf1rQ60751 1373 aa15.64■□□□□ 0.1
Clip1-202ENSMUST00000063905 DiexfQ8BTT6 772 aaKnown RBP15.64■□□□□ 0.09
Clip1-202ENSMUST00000063905 Kdm3bQ6ZPY7 1562 aa15.64■□□□□ 0.09
Clip1-202ENSMUST00000063905 Sart1Q9Z315 806 aaKnown RBP15.64■□□□□ 0.09
Clip1-202ENSMUST00000063905 Gapvd1Q6PAR5 1458 aa15.64■□□□□ 0.09
Clip1-202ENSMUST00000063905 Rrp7aQ9D1C9 280 aaKnown RBP15.63■□□□□ 0.09
Clip1-202ENSMUST00000063905 Fam208aQ69ZR9 1610 aaKnown RBP15.63■□□□□ 0.09
Clip1-202ENSMUST00000063905 SphkapQ6NSW3 1687 aa15.63■□□□□ 0.09
Clip1-202ENSMUST00000063905 PtprtQ99M80 1454 aa15.62■□□□□ 0.09
Clip1-202ENSMUST00000063905 Pkd2O35245 966 aa15.61■□□□□ 0.09
Clip1-202ENSMUST00000063905 Trappc8E9PWG2 1437 aa15.61■□□□□ 0.09
Clip1-202ENSMUST00000063905 Ttbk1Q6PCN3 1308 aa15.61■□□□□ 0.09
Clip1-202ENSMUST00000063905 NhsB1AV60 1647 aa15.61■□□□□ 0.09
Clip1-202ENSMUST00000063905 Znf608Q56A10 1511 aa15.6■□□□□ 0.09
Clip1-202ENSMUST00000063905 Cul7Q8VE73 1689 aa15.6■□□□□ 0.09
Clip1-202ENSMUST00000063905 Tnnt3Q9QZ47 272 aa15.58■□□□□ 0.08
Clip1-202ENSMUST00000063905 Slc24a1Q91WD8 1130 aa15.58■□□□□ 0.08
Clip1-202ENSMUST00000063905 Wdr7Q920I9 1489 aa15.56■□□□□ 0.08
Clip1-202ENSMUST00000063905 Nup155Q99P88 1391 aaKnown RBP15.55■□□□□ 0.08
Clip1-202ENSMUST00000063905 Trak1Q6PD31 939 aa15.55■□□□□ 0.08
Clip1-202ENSMUST00000063905 Fhod3Q76LL6 1578 aa15.55■□□□□ 0.08
Clip1-202ENSMUST00000063905 Map4P27546 1125 aaKnown RBP15.55■□□□□ 0.08
Clip1-202ENSMUST00000063905 AlkP97793 1621 aa15.54■□□□□ 0.08
Clip1-202ENSMUST00000063905 Ttll5Q8CHB8 1328 aa15.54■□□□□ 0.08
Clip1-202ENSMUST00000063905 Kiaa1210E9Q0C6 1637 aa15.53■□□□□ 0.08
Clip1-202ENSMUST00000063905 Rnf17Q99MV7 1640 aa15.53■□□□□ 0.08
Clip1-202ENSMUST00000063905 Abca8bQ8K440 1620 aa15.52■□□□□ 0.07
Clip1-202ENSMUST00000063905 AI481877A2ALV5 1481 aa15.51■□□□□ 0.07
Clip1-202ENSMUST00000063905 Gm156Q58A37 223 aa15.51■□□□□ 0.07
Clip1-202ENSMUST00000063905 Usp47Q8BY87 1376 aa15.51■□□□□ 0.07
Clip1-202ENSMUST00000063905 Lrrc9Q8CDN9 1456 aa15.51■□□□□ 0.07
Clip1-202ENSMUST00000063905 Hnrnpul2Q00PI9 745 aaKnown RBP15.51■□□□□ 0.07
Clip1-202ENSMUST00000063905 Cep170Q6A065 1588 aa15.5■□□□□ 0.07
Clip1-202ENSMUST00000063905 Gm32742A0A1B0GT42 1604 aa15.5■□□□□ 0.07
Clip1-202ENSMUST00000063905 Clstn2Q9ER65 966 aa15.5■□□□□ 0.07
Clip1-202ENSMUST00000063905 Cfap74Q3UY96 1578 aa15.49■□□□□ 0.07
Clip1-202ENSMUST00000063905 Fmn2Q9JL04 1578 aa15.48■□□□□ 0.07
Clip1-202ENSMUST00000063905 Naip5Q9R016 1403 aa15.48■□□□□ 0.07
Clip1-202ENSMUST00000063905 Map3k5O35099 1380 aa15.47■□□□□ 0.07
Clip1-202ENSMUST00000063905 Dhx9O70133 1380 aaKnown RBP15.47■□□□□ 0.07
Clip1-202ENSMUST00000063905 Adgrl2Q8JZZ7 1487 aa15.46■□□□□ 0.07
Clip1-202ENSMUST00000063905 Ssh2Q5SW75 1423 aa15.46■□□□□ 0.07
Clip1-202ENSMUST00000063905 Setbp1Q9Z180 1582 aa15.46■□□□□ 0.06
Clip1-202ENSMUST00000063905 Lemd3Q9WU40 921 aa15.45■□□□□ 0.06
Clip1-202ENSMUST00000063905 Prdm16A2A935 1275 aa15.45■□□□□ 0.06
Clip1-202ENSMUST00000063905 Rgl3Q3UYI5 709 aa15.44■□□□□ 0.06
Clip1-202ENSMUST00000063905 Spag9Q58A65 1321 aaKnown RBP15.44■□□□□ 0.06
Clip1-202ENSMUST00000063905 Mapk8ip2Q9ERE9 830 aa15.44■□□□□ 0.06
Clip1-202ENSMUST00000063905 Abcc3B2RX12 1523 aa15.43■□□□□ 0.06
Clip1-202ENSMUST00000063905 Rprd2Q6NXI6 1469 aaKnown RBP15.43■□□□□ 0.06
Clip1-202ENSMUST00000063905 Gm13697A2AK42 830 aa15.41■□□□□ 0.06
Clip1-202ENSMUST00000063905 Pdcd11Q6NS46 1862 aaKnown RBP15.41■□□□□ 0.06
Clip1-202ENSMUST00000063905 Lamc1P02468 1607 aaKnown RBP15.4■□□□□ 0.06
Clip1-202ENSMUST00000063905 Csrnp3P59055 597 aa15.4■□□□□ 0.06
Clip1-202ENSMUST00000063905 Zfyve16Q80U44 1528 aa15.39■□□□□ 0.05
Clip1-202ENSMUST00000063905 Trpm2Q91YD4 1506 aa15.39■□□□□ 0.05
Clip1-202ENSMUST00000063905 Pik3c2gO70167 1506 aa15.39■□□□□ 0.05
Clip1-202ENSMUST00000063905 Supt6hQ62383 1726 aaKnown RBP15.39■□□□□ 0.05
Clip1-202ENSMUST00000063905 Sin3aQ60520 1274 aaKnown RBP15.38■□□□□ 0.05
Clip1-202ENSMUST00000063905 Anks4bQ8K3X6 423 aa15.38■□□□□ 0.05
Clip1-202ENSMUST00000063905 Mast1Q9R1L5 1570 aa15.38■□□□□ 0.05
Clip1-202ENSMUST00000063905 Pde4cQ3UEI1 686 aa15.37■□□□□ 0.05
Clip1-202ENSMUST00000063905 Cdc42bpbQ7TT50 1713 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms