RNA–Protein interactions for RNA: ENSMUST00000063905.11

Clip1-202, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 4,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-202ENSMUST00000063905 NischQ80TM9 1593 aa22.17■■□□□ 1.14
Clip1-202ENSMUST00000063905 Gm35339A0A140LHH9 1649 aa21.84■■□□□ 1.09
Clip1-202ENSMUST00000063905 Abcc9P70170 1546 aa21.45■■□□□ 1.02
Clip1-202ENSMUST00000063905 Abcc8B2RUS7 1588 aa21.15■□□□□ 0.98
Clip1-202ENSMUST00000063905 Rhox8Q6VSS7 320 aa20.34■□□□□ 0.85
Clip1-202ENSMUST00000063905 ScribQ80U72 1612 aa19.9■□□□□ 0.78
Clip1-202ENSMUST00000063905 Dcaf1Q80TR8 1506 aa19.59■□□□□ 0.73
Clip1-202ENSMUST00000063905 Kdm5dQ62240 1548 aa19.49■□□□□ 0.71
Clip1-202ENSMUST00000063905 NacadQ5SWP3 1504 aa19.42■□□□□ 0.7
Clip1-202ENSMUST00000063905 Rb1cc1Q9ESK9 1588 aa19.39■□□□□ 0.69
Clip1-202ENSMUST00000063905 Rtl1Q7M732 1744 aa19.25■□□□□ 0.67
Clip1-202ENSMUST00000063905 Baz1aO88379 1555 aa19.13■□□□□ 0.65
Clip1-202ENSMUST00000063905 Sycp2Q9CUU3 1500 aa18.99■□□□□ 0.63
Clip1-202ENSMUST00000063905 Ccdc180J3QNE4 1664 aa18.98■□□□□ 0.63
Clip1-202ENSMUST00000063905 Zcchc6Q5BLK4 1491 aaKnown RBP18.93■□□□□ 0.62
Clip1-202ENSMUST00000063905 Ccdc136Q3TVA9 1136 aa18.9■□□□□ 0.62
Clip1-202ENSMUST00000063905 Crybg2B7ZCC2 1516 aa18.83■□□□□ 0.61
Clip1-202ENSMUST00000063905 Smarca2Q6DIC0 1577 aa18.63■□□□□ 0.57
Clip1-202ENSMUST00000063905 BicraF8VPZ9 1578 aa18.59■□□□□ 0.57
Clip1-202ENSMUST00000063905 Trim41Q5NCC3 630 aa18.49■□□□□ 0.55
Clip1-202ENSMUST00000063905 Cecr2E9Q2Z1 1453 aa18.39■□□□□ 0.53
Clip1-202ENSMUST00000063905 Brd4Q9ESU6 1400 aaKnown RBP18.27■□□□□ 0.51
Clip1-202ENSMUST00000063905 HrcG5E8J6 738 aa18.17■□□□□ 0.5
Clip1-202ENSMUST00000063905 Cngb1E1AZ71 1325 aa18.12■□□□□ 0.49
Clip1-202ENSMUST00000063905 Esf1Q3V1V3 845 aaKnown RBP18.11■□□□□ 0.49
Clip1-202ENSMUST00000063905 Synj1Q8CHC4 1574 aa18.1■□□□□ 0.49
Clip1-202ENSMUST00000063905 Smarca4Q3TKT4 1613 aaKnown RBP18.08■□□□□ 0.48
Clip1-202ENSMUST00000063905 CftrP26361 1476 aa18.07■□□□□ 0.48
Clip1-202ENSMUST00000063905 Pds5bQ4VA53 1446 aaKnown RBP17.96■□□□□ 0.47
Clip1-202ENSMUST00000063905 Atad2bE9Q166 1460 aaKnown RBP17.95■□□□□ 0.46
Clip1-202ENSMUST00000063905 Cttnbp2B9EJA2 1648 aa17.93■□□□□ 0.46
Clip1-202ENSMUST00000063905 Rpgrip1Q9EPQ2 1331 aa17.92■□□□□ 0.46
Clip1-202ENSMUST00000063905 Golga3P55937 1487 aa17.91■□□□□ 0.46
Clip1-202ENSMUST00000063905 Iqgap2Q3UQ44 1575 aa17.9■□□□□ 0.46
Clip1-202ENSMUST00000063905 Chic1Q8CBW7 227 aa17.8■□□□□ 0.44
Clip1-202ENSMUST00000063905 Cep164Q5DU05 1446 aa17.76■□□□□ 0.43
Clip1-202ENSMUST00000063905 Rsf1E9PWW9 1441 aaKnown RBP17.75■□□□□ 0.43
Clip1-202ENSMUST00000063905 Ccdc88bQ4QRL3 1481 aa17.71■□□□□ 0.43
Clip1-202ENSMUST00000063905 Gab3Q8BSM5 595 aa17.67■□□□□ 0.42
Clip1-202ENSMUST00000063905 Top2bQ64511 1612 aa17.65■□□□□ 0.42
Clip1-202ENSMUST00000063905 Ercc6F8VPZ5 1481 aa17.65■□□□□ 0.42
Clip1-202ENSMUST00000063905 Frmpd1A2AKB4 1549 aa17.62■□□□□ 0.41
Clip1-202ENSMUST00000063905 Wdr62Q3U3T8 1523 aa17.58■□□□□ 0.41
Clip1-202ENSMUST00000063905 Cc2d2aQ8CFW7 1633 aa17.54■□□□□ 0.4
Clip1-202ENSMUST00000063905 Fmn1Q05860 1466 aa17.51■□□□□ 0.39
Clip1-202ENSMUST00000063905 Ehmt2Q9Z148 1263 aaKnown RBP17.47■□□□□ 0.39
Clip1-202ENSMUST00000063905 Thoc2B1AZI6 1594 aaKnown RBP17.4■□□□□ 0.38
Clip1-202ENSMUST00000063905 Kif15Q6P9L6 1387 aa17.39■□□□□ 0.38
Clip1-202ENSMUST00000063905 Phldb1Q6PDH0 1371 aaKnown RBP17.38■□□□□ 0.37
Clip1-202ENSMUST00000063905 Il27Q8K3I6 234 aa17.37■□□□□ 0.37
Clip1-202ENSMUST00000063905 Ubl4bQ9CQ84 188 aa17.35■□□□□ 0.37
Clip1-202ENSMUST00000063905 Top2aQ01320 1528 aaKnown RBP17.3■□□□□ 0.36
Clip1-202ENSMUST00000063905 Unc13aQ4KUS2 1712 aa17.28■□□□□ 0.36
Clip1-202ENSMUST00000063905 Lamc3Q9R0B6 1581 aa17.27■□□□□ 0.35
Clip1-202ENSMUST00000063905 Npm2Q80W85 207 aa17.26■□□□□ 0.35
Clip1-202ENSMUST00000063905 TnnQ80Z71 1560 aa17.25■□□□□ 0.35
Clip1-202ENSMUST00000063905 Dnajc5bQ9CQ94 199 aa17.2■□□□□ 0.34
Clip1-202ENSMUST00000063905 Fam135aQ6NS59 1506 aa17.18■□□□□ 0.34
Clip1-202ENSMUST00000063905 Myt1lP97500 1187 aa17.18■□□□□ 0.34
Clip1-202ENSMUST00000063905 Cux2P70298 1426 aa17.17■□□□□ 0.34
Clip1-202ENSMUST00000063905 Npm1Q61937 292 aaKnown RBP17.16■□□□□ 0.34
Clip1-202ENSMUST00000063905 Las1lA2BE28 776 aaKnown RBP17.15■□□□□ 0.34
Clip1-202ENSMUST00000063905 Rapgef2Q8CHG7 1496 aa17.15■□□□□ 0.34
Clip1-202ENSMUST00000063905 Ccdc18Q640L5 1455 aa17.15■□□□□ 0.34
Clip1-202ENSMUST00000063905 Camsap1A2AHC3 1581 aa17.09■□□□□ 0.33
Clip1-202ENSMUST00000063905 Cep162Q6ZQ06 1403 aa17.08■□□□□ 0.32
Clip1-202ENSMUST00000063905 Zeb1Q64318 1117 aa17.03■□□□□ 0.32
Clip1-202ENSMUST00000063905 PtprkP35822 1457 aa17.02■□□□□ 0.32
Clip1-202ENSMUST00000063905 Acin1Q9JIX8 1338 aaKnown RBP16.99■□□□□ 0.31
Clip1-202ENSMUST00000063905 Grin2bQ01097 1482 aa16.97■□□□□ 0.31
Clip1-202ENSMUST00000063905 NrkQ9R0G8 1455 aa16.95■□□□□ 0.3
Clip1-202ENSMUST00000063905 LrpprcQ6PB66 1392 aaKnown RBP16.95■□□□□ 0.3
Clip1-202ENSMUST00000063905 Shroom4Q1W617 1475 aa16.94■□□□□ 0.3
Clip1-202ENSMUST00000063905 Mrc2Q64449 1479 aa16.91■□□□□ 0.3
Clip1-202ENSMUST00000063905 Arhgap35Q91YM2 1499 aa16.88■□□□□ 0.29
Clip1-202ENSMUST00000063905 Dhx29Q6PGC1 1365 aaKnown RBP16.86■□□□□ 0.29
Clip1-202ENSMUST00000063905 PogzQ8BZH4 1409 aaKnown RBP16.86■□□□□ 0.29
Clip1-202ENSMUST00000063905 Baz1bQ9Z277 1479 aa16.85■□□□□ 0.29
Clip1-202ENSMUST00000063905 Duox2A2AQ99 1517 aa16.83■□□□□ 0.29
Clip1-202ENSMUST00000063905 Efcab5A0JP43 1406 aa16.83■□□□□ 0.28
Clip1-202ENSMUST00000063905 Eif4g1Q6NZJ6 1600 aaKnown RBP16.83■□□□□ 0.28
Clip1-202ENSMUST00000063905 Clip1Q922J3 1391 aa16.82■□□□□ 0.28
Clip1-202ENSMUST00000063905 Mroh2bQ7M6Y6 1581 aa16.77■□□□□ 0.27
Clip1-202ENSMUST00000063905 UbtfP25976 765 aaKnown RBP16.75■□□□□ 0.27
Clip1-202ENSMUST00000063905 Map3k1P53349 1493 aa16.74■□□□□ 0.27
Clip1-202ENSMUST00000063905 Ap3b1Q9Z1T1 1105 aa16.74■□□□□ 0.27
Clip1-202ENSMUST00000063905 Kif21aQ9QXL2 1672 aa16.73■□□□□ 0.27
Clip1-202ENSMUST00000063905 Plekhg3Q4VAC9 1341 aa16.71■□□□□ 0.27
Clip1-202ENSMUST00000063905 Eea1Q8BL66 1411 aa16.7■□□□□ 0.26
Clip1-202ENSMUST00000063905 Setd5Q5XJV7 1441 aa16.7■□□□□ 0.26
Clip1-202ENSMUST00000063905 Crocc2F6XLV1 1638 aa16.68■□□□□ 0.26
Clip1-202ENSMUST00000063905 Samd9lQ69Z37 1561 aa16.66■□□□□ 0.26
Clip1-202ENSMUST00000063905 Rad54l2Q99NG0 1466 aa16.66■□□□□ 0.26
Clip1-202ENSMUST00000063905 Carmil1Q6EDY6 1374 aa16.65■□□□□ 0.26
Clip1-202ENSMUST00000063905 Plb1Q3TTY0 1478 aa16.63■□□□□ 0.25
Clip1-202ENSMUST00000063905 Mier1Q5UAK0 511 aa16.62■□□□□ 0.25
Clip1-202ENSMUST00000063905 AqrQ8CFQ3 1481 aaKnown RBP16.6■□□□□ 0.25
Clip1-202ENSMUST00000063905 SynmQ70IV5 1561 aa16.6■□□□□ 0.25
Clip1-202ENSMUST00000063905 Wdr66E9Q743 1299 aa16.6■□□□□ 0.25
Clip1-202ENSMUST00000063905 Arap1Q4LDD4 1452 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms