RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 IbspQ61711 324 aa19.76■□□□□ 0.75
Ubr3-201ENSMUST00000055758 NudcO35685 332 aaKnown RBP19.75■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Cnga1P29974 684 aa19.74■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Isy1Q69ZQ2 285 aaKnown RBP19.74■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Arid4aF8VPQ2 1261 aaKnown RBP19.72■□□□□ 0.75
Ubr3-201ENSMUST00000055758 PtmsQ9D0J8 101 aaKnown RBP19.72■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Mfap1aC0HKD8 439 aaKnown RBP19.71■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Mfap1bC0HKD9 439 aaKnown RBP19.71■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Trim30aP15533 496 aa19.71■□□□□ 0.75
Ubr3-201ENSMUST00000055758 Iqcf3Q9D498 203 aa19.7■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Stag3O70576 1240 aa19.7■□□□□ 0.74
Ubr3-201ENSMUST00000055758 ChgaP26339 463 aaKnown RBP19.69■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Mical1Q8VDP3 1048 aa19.69■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Ipo8Q7TMY7 1010 aa19.69■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Pknox2Q8BG99 474 aa19.69■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Tpm3-rs7D3Z2H9 248 aa19.68■□□□□ 0.74
Ubr3-201ENSMUST00000055758 CalrP14211 416 aaKnown RBP19.68■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Iffo2Q8R2V2 512 aa19.68■□□□□ 0.74
Ubr3-201ENSMUST00000055758 VgfQ0VGU4 617 aa19.67■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Ubl4bQ9CQ84 188 aa19.67■□□□□ 0.74
Ubr3-201ENSMUST00000055758 CrebrfQ8CDG5 640 aaKnown RBP19.66■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Cluap1Q8R3P7 413 aa19.66■□□□□ 0.74
Ubr3-201ENSMUST00000055758 GorabQ8BRM2 368 aa19.66■□□□□ 0.74
Ubr3-201ENSMUST00000055758 U2surpQ6NV83 1029 aaKnown RBP19.66■□□□□ 0.74
Ubr3-201ENSMUST00000055758 R3hcc1Q8BSI6 488 aa19.66■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Plin1Q8CGN5 517 aa19.65■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Speer4f1Q9D5Q6 258 aa19.65■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Becn1O88597 448 aa19.65■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Ddrgk1Q80WW9 315 aa19.65■□□□□ 0.74
Ubr3-201ENSMUST00000055758 Fbxo2Q80UW2 297 aa19.65■□□□□ 0.74
Ubr3-201ENSMUST00000055758 HnrnpuQ8VEK3 800 aaKnown RBP19.64■□□□□ 0.73
Ubr3-201ENSMUST00000055758 Stk24Q99KH8 431 aa19.63■□□□□ 0.73
Ubr3-201ENSMUST00000055758 Tmco5bQ80X59 307 aa19.62■□□□□ 0.73
Ubr3-201ENSMUST00000055758 Samd1D3YXK1 519 aa19.61■□□□□ 0.73
Ubr3-201ENSMUST00000055758 Znf330Q922H9 316 aa19.6■□□□□ 0.73
Ubr3-201ENSMUST00000055758 Hspa5P20029 655 aaKnown RBP19.56■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Tomm22Q9CPQ3 142 aa19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 MecomP14404 1042 aa19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Exoc6Q8R313 802 aa19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 PrkcshO08795 521 aa19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Senp3Q9EP97 568 aaKnown RBP19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Rb1cc1Q9ESK9 1588 aa19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Ush1cQ9ES64 910 aa19.55■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Ubap1lG3UW59 384 aa19.54■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Tpm3P21107 285 aaKnown RBP19.54■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Dusp9Q7TNL7 452 aa19.54■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Nolc1E9Q5C9 702 aaKnown RBP19.53■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Rrp7aQ9D1C9 280 aaKnown RBP19.53■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Ncbp3Q8BZR9 615 aaKnown RBP19.53■□□□□ 0.72
Ubr3-201ENSMUST00000055758 Sart3Q9JLI8 962 aaKnown RBP19.51■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Rtf1A2AQ19 715 aaKnown RBP19.5■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Fam193aQ8CGI1 1231 aaKnown RBP19.49■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Q8BT18 775 aa19.49■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Eea1Q8BL66 1411 aa19.48■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Zrsr2Q62377 462 aaKnown RBP19.48■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Znf771Q8BJ90 317 aa19.46■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Smarce1O54941 411 aaKnown RBP19.46■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Rundc1Q0VDN7 615 aa19.46■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Vps53Q8CCB4 832 aa19.46■□□□□ 0.71
Ubr3-201ENSMUST00000055758 Tnnt1O88346 262 aa19.45■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Mex3cQ05A36 652 aaKnown RBP19.45■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Sin3aQ60520 1274 aaKnown RBP19.45■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Drc7Q6V3W6 876 aa19.45■□□□□ 0.7
Ubr3-201ENSMUST00000055758 4933402E13RikQ9D4D2 429 aa19.44■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Cspp1B2RX88 1205 aa19.44■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Dnai2A2AC93 623 aa19.44■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Mtus2Q3UHD3 1353 aa19.44■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Brpf1B2RRD7 1212 aa19.44■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Fhad1A6PWD2 1420 aa19.44■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Ccer1Q9CQL2 403 aa19.43■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Zscan21Q07231 555 aa19.43■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Sf3a1Q8K4Z5 791 aaKnown RBP19.43■□□□□ 0.7
Ubr3-201ENSMUST00000055758 BbxQ8VBW5 907 aa19.42■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Ipo4Q8VI75 1082 aa19.42■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Rsph3aQ3UFY4 516 aa19.41■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Pde3bQ61409 1100 aa19.41■□□□□ 0.7
Ubr3-201ENSMUST00000055758 U2af1Q9D883 239 aaKnown RBP19.41■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Taf3Q5HZG4 932 aa19.41■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Golga2Q921M4 999 aa19.4■□□□□ 0.7
Ubr3-201ENSMUST00000055758 CrbnQ8C7D2 445 aa19.4■□□□□ 0.7
Ubr3-201ENSMUST00000055758 Tpd52l1O54818 204 aa19.39■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Tpm4Q6IRU2 248 aa19.39■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Zfp777B9EKF4 885 aa19.39■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Ccdc34Q3UI66 367 aa19.39■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Tmf1B9EKI3 1091 aa19.38■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Q3TQI7 289 aaKnown RBP19.38■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Arhgap27A2AB59 869 aa19.38■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Utp3Q9JI13 469 aaKnown RBP19.38■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Plcd4Q8K3R3 807 aa19.37■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Nol10Q5RJG1 687 aaKnown RBP19.36■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Mia2Q91ZV0 1396 aa19.36■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Znf526Q8BI66 675 aa19.35■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Ksr2Q3UVC0 959 aa19.34■□□□□ 0.69
Ubr3-201ENSMUST00000055758 Atp6v1dP57746 247 aa19.32■□□□□ 0.68
Ubr3-201ENSMUST00000055758 MyclP10166 368 aa19.32■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Stk26Q99JT2 416 aa19.32■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Pnmal2G3X9N3 661 aa19.31■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Polr3gQ6NXY9 223 aa19.31■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Eif4g2Q62448 906 aaKnown RBP19.3■□□□□ 0.68
Ubr3-201ENSMUST00000055758 Pibf1E9Q6K3 756 aa19.3■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 135.2 ms