RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Ccnb3Q810T2 1396 aa40.52■■■■■ 4.08
Shf-201ENSMUST00000048635 Clasp1Q80TV8 1535 aaKnown RBP40.49■■■■■ 4.07
Shf-201ENSMUST00000048635 Rnf17Q99MV7 1640 aa40.49■■■■■ 4.07
Shf-201ENSMUST00000048635 Mlh3A0A1Y7VMP7 1443 aa40.43■■■■■ 4.06
Shf-201ENSMUST00000048635 Ehmt2Q9Z148 1263 aaKnown RBP40.42■■■■■ 4.06
Shf-201ENSMUST00000048635 Arid3cA6PWV5 409 aa40.41■■■■■ 4.06
Shf-201ENSMUST00000048635 Adcy10Q8C0T9 1614 aa40.38■■■■■ 4.05
Shf-201ENSMUST00000048635 A2mQ6GQT1 1474 aa40.38■■■■■ 4.05
Shf-201ENSMUST00000048635 Caskin1Q6P9K8 1431 aa40.36■■■■■ 4.05
Shf-201ENSMUST00000048635 UbtfP25976 765 aaKnown RBP40.34■■■■■ 4.05
Shf-201ENSMUST00000048635 Ttc37F8VPK0 1563 aa40.3■■■■■ 4.04
Shf-201ENSMUST00000048635 Ppp1r18Q8BQ30 594 aa40.3■■■■■ 4.04
Shf-201ENSMUST00000048635 Cdk11bP24788 784 aaKnown RBP40.29■■■■■ 4.04
Shf-201ENSMUST00000048635 Arhgap5P97393 1501 aa40.28■■■■■ 4.04
Shf-201ENSMUST00000048635 Pdcd11Q6NS46 1862 aaKnown RBP40.28■■■■■ 4.04
Shf-201ENSMUST00000048635 Zfyve16Q80U44 1528 aa40.26■■■■■ 4.04
Shf-201ENSMUST00000048635 Cfap74Q3UY96 1578 aa40.23■■■■■ 4.03
Shf-201ENSMUST00000048635 Arhgef40Q3UPH7 1517 aa40.22■■■■■ 4.03
Shf-201ENSMUST00000048635 AglF8VPN4 1532 aa40.21■■■■■ 4.03
Shf-201ENSMUST00000048635 3425401B19RikD3Z1D3 1412 aa40.18■■■■■ 4.02
Shf-201ENSMUST00000048635 AdgbG3UZ78 1657 aa40.14■■■■■ 4.02
Shf-201ENSMUST00000048635 Gm32742A0A1B0GT42 1604 aa40.13■■■■■ 4.02
Shf-201ENSMUST00000048635 Tdrd9Q14BI7 1383 aa40.12■■■■■ 4.01
Shf-201ENSMUST00000048635 Depdc5P61460 1591 aa40.12■■■■■ 4.01
Shf-201ENSMUST00000048635 Abca9Q8K449 1623 aa40.06■■■■■ 4
Shf-201ENSMUST00000048635 Kdm6bQ5NCY0 1641 aa40.06■■■■■ 4
Shf-201ENSMUST00000048635 Abcc3B2RX12 1523 aa40.04■■■■■ 4
Shf-201ENSMUST00000048635 Plekhh2Q8C115 1491 aa40.02■■■■■ 4
Shf-201ENSMUST00000048635 Ncapd3Q6ZQK0 1506 aa40■■■■□ 3.99
Shf-201ENSMUST00000048635 Kidins220E9Q9B7 1793 aa39.98■■■■□ 3.99
Shf-201ENSMUST00000048635 Abcc5Q9R1X5 1436 aa39.96■■■■□ 3.99
Shf-201ENSMUST00000048635 Hecw1Q8K4P8 1604 aa39.96■■■■□ 3.99
Shf-201ENSMUST00000048635 Mtus2Q3UHD3 1353 aa39.96■■■■□ 3.99
Shf-201ENSMUST00000048635 Trappc8E9PWG2 1437 aa39.92■■■■□ 3.98
Shf-201ENSMUST00000048635 Kiaa0556Q8C753 1610 aa39.87■■■■□ 3.97
Shf-201ENSMUST00000048635 UacaQ8CGB3 1411 aa39.87■■■■□ 3.97
Shf-201ENSMUST00000048635 Naip2Q9QUK4 1447 aa39.84■■■■□ 3.97
Shf-201ENSMUST00000048635 Neurl4Q5NCX5 1563 aa39.84■■■■□ 3.97
Shf-201ENSMUST00000048635 Il16O54824 1322 aa39.83■■■■□ 3.97
Shf-201ENSMUST00000048635 Lemd3Q9WU40 921 aa39.8■■■■□ 3.96
Shf-201ENSMUST00000048635 Mast1Q9R1L5 1570 aa39.79■■■■□ 3.96
Shf-201ENSMUST00000048635 Mia2Q91ZV0 1396 aa39.78■■■■□ 3.96
Shf-201ENSMUST00000048635 Cdc42bpbQ7TT50 1713 aa39.77■■■■□ 3.96
Shf-201ENSMUST00000048635 Sart1Q9Z315 806 aaKnown RBP39.77■■■■□ 3.96
Shf-201ENSMUST00000048635 Rfx7F8VPJ6 1459 aa39.75■■■■□ 3.95
Shf-201ENSMUST00000048635 OvosQ3UU35 1456 aa39.75■■■■□ 3.95
Shf-201ENSMUST00000048635 Fam50aQ9WV03 339 aaKnown RBP39.74■■■■□ 3.95
Shf-201ENSMUST00000048635 Fmn2Q9JL04 1578 aa39.74■■■■□ 3.95
Shf-201ENSMUST00000048635 Fndc1E9Q043 1732 aa39.74■■■■□ 3.95
Shf-201ENSMUST00000048635 SphkapQ6NSW3 1687 aa39.72■■■■□ 3.95
Shf-201ENSMUST00000048635 Cabp1Q9JLK7 227 aa39.7■■■■□ 3.95
Shf-201ENSMUST00000048635 Kdm5cP41230 1554 aa39.69■■■■□ 3.94
Shf-201ENSMUST00000048635 Kdm3bQ6ZPY7 1562 aa39.69■■■■□ 3.94
Shf-201ENSMUST00000048635 Synj2Q9D2G5 1434 aa39.64■■■■□ 3.94
Shf-201ENSMUST00000048635 Pcdh10E9PXQ7 1057 aa39.64■■■■□ 3.94
Shf-201ENSMUST00000048635 Fhad1A6PWD2 1420 aa39.64■■■■□ 3.94
Shf-201ENSMUST00000048635 Adgrl2Q8JZZ7 1487 aa39.63■■■■□ 3.93
Shf-201ENSMUST00000048635 Chic2Q9D9G3 165 aa39.63■■■■□ 3.93
Shf-201ENSMUST00000048635 Hecw2Q6I6G8 1578 aa39.63■■■■□ 3.93
Shf-201ENSMUST00000048635 Atp10aO54827 1508 aa39.6■■■■□ 3.93
Shf-201ENSMUST00000048635 NclP09405 707 aaKnown RBP39.6■■■■□ 3.93
Shf-201ENSMUST00000048635 Prdm16A2A935 1275 aa39.58■■■■□ 3.93
Shf-201ENSMUST00000048635 Vps8Q0P5W1 1427 aa39.58■■■■□ 3.93
Shf-201ENSMUST00000048635 Cul9Q80TT8 1865 aa39.55■■■■□ 3.92
Shf-201ENSMUST00000048635 Mier1Q5UAK0 511 aa39.52■■■■□ 3.92
Shf-201ENSMUST00000048635 Adgrb2Q8CGM1 1561 aa39.5■■■■□ 3.91
Shf-201ENSMUST00000048635 Rrp7aQ9D1C9 280 aaKnown RBP39.44■■■■□ 3.9
Shf-201ENSMUST00000048635 RereQ80TZ9 1558 aa39.44■■■■□ 3.9
Shf-201ENSMUST00000048635 Nos1Q9Z0J4 1429 aa39.41■■■■□ 3.9
Shf-201ENSMUST00000048635 Dip2cE9PWR4 1557 aa39.41■■■■□ 3.9
Shf-201ENSMUST00000048635 Abca17E9PX95 1733 aa39.39■■■■□ 3.9
Shf-201ENSMUST00000048635 Fhod3Q76LL6 1578 aa39.37■■■■□ 3.89
Shf-201ENSMUST00000048635 Ptch1Q61115 1434 aa39.36■■■■□ 3.89
Shf-201ENSMUST00000048635 Map3k5O35099 1380 aa39.36■■■■□ 3.89
Shf-201ENSMUST00000048635 Cdc42bpgQ80UW5 1551 aa39.35■■■■□ 3.89
Shf-201ENSMUST00000048635 Xrn1P97789 1719 aaKnown RBP39.34■■■■□ 3.89
Shf-201ENSMUST00000048635 Ccer2J3QPU5 274 aa39.3■■■■□ 3.88
Shf-201ENSMUST00000048635 Kif14L0N7N1 1674 aaKnown RBP39.29■■■■□ 3.88
Shf-201ENSMUST00000048635 Znf518aB2RRF6 1478 aaKnown RBP39.27■■■■□ 3.88
Shf-201ENSMUST00000048635 Zmym4A2A791 1549 aaKnown RBP39.27■■■■□ 3.88
Shf-201ENSMUST00000048635 Dennd4bQ3U1Y4 1499 aa39.25■■■■□ 3.87
Shf-201ENSMUST00000048635 Ssh2Q5SW75 1423 aa39.24■■■■□ 3.87
Shf-201ENSMUST00000048635 Plch2A2AP18 1501 aa39.24■■■■□ 3.87
Shf-201ENSMUST00000048635 Spag9Q58A65 1321 aaKnown RBP39.23■■■■□ 3.87
Shf-201ENSMUST00000048635 AlkP97793 1621 aa39.22■■■■□ 3.87
Shf-201ENSMUST00000048635 Trpm1Q2TV84 1622 aa39.22■■■■□ 3.87
Shf-201ENSMUST00000048635 Yeats2Q3TUF7 1407 aa39.2■■■■□ 3.87
Shf-201ENSMUST00000048635 Clstn2Q9ER65 966 aa39.19■■■■□ 3.86
Shf-201ENSMUST00000048635 Ube2uB1AUC4 352 aa39.16■■■■□ 3.86
Shf-201ENSMUST00000048635 Qser1A2BIE1 1698 aa39.15■■■■□ 3.86
Shf-201ENSMUST00000048635 Gli2Q0VGT2 1544 aa39.15■■■■□ 3.86
Shf-201ENSMUST00000048635 Trpm2Q91YD4 1506 aa39.14■■■■□ 3.86
Shf-201ENSMUST00000048635 Usp54Q8BL06 1588 aaKnown RBP39.13■■■■□ 3.85
Shf-201ENSMUST00000048635 Kif1bQ60575 1816 aaKnown RBP39.12■■■■□ 3.85
Shf-201ENSMUST00000048635 NpatQ8BMA5 1420 aa39.12■■■■□ 3.85
Shf-201ENSMUST00000048635 Cfap65Q3V0B4 1847 aa39.11■■■■□ 3.85
Shf-201ENSMUST00000048635 Acin1Q9JIX8 1338 aaKnown RBP39.11■■■■□ 3.85
Shf-201ENSMUST00000048635 Topbp1Q6ZQF0 1515 aa39.1■■■■□ 3.85
Shf-201ENSMUST00000048635 Uggt2E9Q4X2 1504 aa39.09■■■■□ 3.85
Shf-201ENSMUST00000048635 Nup155Q99P88 1391 aaKnown RBP39.07■■■■□ 3.84
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms