RNA–Protein interactions for RNA: ENSMUST00000042534.14

Ccdc85a-201, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-201ENSMUST00000042534 Trak1Q6PD31 939 aa17.93■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 HnrnpuQ8VEK3 800 aaKnown RBP17.93■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 EspnQ9ET47 871 aa17.93■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Rapgef2Q8CHG7 1496 aa17.93■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Gtf2e1Q9D0D5 440 aa17.93■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Irx3P81067 507 aa17.92■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Speer4f1Q9D5Q6 258 aa17.92■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Armcx1Q9CX83 456 aa17.92■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Ifit1bl1D3Z6F0 470 aa17.91■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Slc4a3P16283 1227 aa17.91■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Synj1Q8CHC4 1574 aa17.9■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Cnga1P29974 684 aa17.9■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Ipo9Q91YE6 1041 aa17.9■□□□□ 0.46
Ccdc85a-201ENSMUST00000042534 Dnai1Q8C0M8 701 aa17.89■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Rock2P70336 1388 aa17.89■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Cecr2E9Q2Z1 1453 aa17.88■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Casc1Q6TDU8 730 aa17.88■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Plekhh2Q8C115 1491 aa17.88■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 UacaQ8CGB3 1411 aa17.88■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 MccE9PWI3 1003 aa17.87■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 PtmsQ9D0J8 101 aaKnown RBP17.86■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Cux2P70298 1426 aa17.86■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Nup155Q99P88 1391 aaKnown RBP17.85■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Adam1bQ8R534 806 aa17.84■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Bcl11aQ9QYE3 773 aa17.84■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Hsp90b1P08113 802 aaKnown RBP17.84■□□□□ 0.45
Ccdc85a-201ENSMUST00000042534 Golga2Q921M4 999 aa17.82■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 AU015836B2RUM3 263 aa17.81■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 1700019A02RikA0A087WPV9 146 aa17.81■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Smg6P61406 1418 aaKnown RBP17.79■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 NgefQ8CHT1 710 aa17.79■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Ipo8Q7TMY7 1010 aa17.79■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Stard8Q8K031 1019 aa17.79■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Ccnb3Q810T2 1396 aa17.78■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Cttnbp2B9EJA2 1648 aa17.78■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Atad2bE9Q166 1460 aaKnown RBP17.77■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 AknaQ80VW7 1404 aa17.77■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Smarca4Q3TKT4 1613 aaKnown RBP17.77■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Znf326O88291 580 aa17.77■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Pes1Q9EQ61 584 aaKnown RBP17.77■□□□□ 0.44
Ccdc85a-201ENSMUST00000042534 Lemd3Q9WU40 921 aa17.77■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 U2af1Q9D883 239 aaKnown RBP17.76■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Srcin1Q9QWI6 1250 aa17.76■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Spryd3E9Q9B3 442 aa17.76■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Phldb1Q6PDH0 1371 aaKnown RBP17.76■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Dcaf11Q91VU6 549 aa17.76■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Sart3Q9JLI8 962 aaKnown RBP17.75■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 PnnO35691 725 aaKnown RBP17.75■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Rtf1A2AQ19 715 aaKnown RBP17.74■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Pde3bQ61409 1100 aa17.74■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Dnttip2Q8R2M2 758 aaKnown RBP17.73■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Usp47Q8BY87 1376 aa17.71■□□□□ 0.43
Ccdc85a-201ENSMUST00000042534 Ccar1Q8CH18 1146 aaKnown RBP17.68■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 U2surpQ6NV83 1029 aaKnown RBP17.68■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 Stk26Q99JT2 416 aa17.67■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 Ankrd36D3Z4K0 1415 aa17.67■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 CrbnQ8C7D2 445 aa17.67■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 LrpprcQ6PB66 1392 aaKnown RBP17.66■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 Tmco5bQ80X59 307 aa17.66■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 Slc4a1apE9PX68 744 aa17.65■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 Gm973E9Q295 1059 aa17.65■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 Erich6bQ9D4S6 220 aa17.64■□□□□ 0.42
Ccdc85a-201ENSMUST00000042534 ScribQ80U72 1612 aa17.63■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Rsph4aQ8BYM7 716 aa17.63■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Mfap1aC0HKD8 439 aaKnown RBP17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Mfap1bC0HKD9 439 aaKnown RBP17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Sh3bp5Q9Z131 463 aa17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Arid3cA6PWV5 409 aa17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Nolc1E9Q5C9 702 aaKnown RBP17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Kif3bQ61771 747 aa17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Cluap1Q8R3P7 413 aa17.62■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 CenpjQ569L8 1344 aa17.61■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Ksr2Q3UVC0 959 aa17.61■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Cux1P53564 1515 aa17.61■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 4933402E13RikQ9D4D2 429 aa17.6■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Rtn4Q99P72 1162 aaKnown RBP17.6■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Sart1Q9Z315 806 aaKnown RBP17.59■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Spag9Q58A65 1321 aaKnown RBP17.59■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Pank3Q8R2W9 370 aa17.59■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Birc3O08863 600 aa17.58■□□□□ 0.41
Ccdc85a-201ENSMUST00000042534 Rock1P70335 1354 aa17.58■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 AampJ3QN89 436 aa17.58■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Smarce1O54941 411 aaKnown RBP17.58■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Q3TQI7 289 aaKnown RBP17.58■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Ppp1r18Q8BQ30 594 aa17.58■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 MyclP10166 368 aa17.57■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Eif4g2Q62448 906 aaKnown RBP17.57■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Cgnl1Q6AW69 1298 aa17.56■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Znf330Q922H9 316 aa17.55■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Ylpm1Q9R0I7 1386 aaKnown RBP17.54■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Psme1P97371 249 aa17.54■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Pcmtd1P59913 357 aa17.54■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Rassf8Q8CJ96 419 aa17.53■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Dapk1Q80YE7 1442 aa17.53■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Atp6v1dP57746 247 aa17.53■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Fan1Q69ZT1 1020 aa17.53■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Rrp12Q6P5B0 1295 aaKnown RBP17.52■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Plin1Q8CGN5 517 aa17.52■□□□□ 0.4
Ccdc85a-201ENSMUST00000042534 Dhx29Q6PGC1 1365 aaKnown RBP17.52■□□□□ 0.39
Ccdc85a-201ENSMUST00000042534 MsnP26041 577 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms