RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Fam13bQ8K2H3 851 aa11.58□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Mbd3Q9Z2D8 285 aaKnown RBP11.58□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Rrp9Q91WM3 475 aaKnown RBP11.57□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 EspnQ9ET47 871 aa11.57□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Chmp4bQ9D8B3 224 aaKnown RBP11.57□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 CgnP59242 1191 aa11.56□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Chmp5Q9D7S9 219 aa11.56□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Neurod2Q62414 383 aa11.56□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Irx6Q9ER75 438 aa11.56□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Ifnlr1Q8CGK5 535 aa11.55□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Ipo8Q7TMY7 1010 aa11.55□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Sh3bp5Q9Z131 463 aa11.54□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Ralbp1Q62172 648 aa11.54□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Clip1Q922J3 1391 aa11.53□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Stard8Q8K031 1019 aa11.53□□□□□ -0.56
Ncbp3-201ENSMUST00000021135 Drc7Q6V3W6 876 aa11.52□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 ChgaP26339 463 aaKnown RBP11.51□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Tpm2P58774 284 aa11.51□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Slc4a1apE9PX68 744 aa11.51□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Trim55G3X8Y1 545 aa11.51□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Paf1Q8K2T8 535 aa11.51□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Ubap1lG3UW59 384 aa11.49□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Chaf1aQ9QWF0 911 aa11.49□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Gps2Q921N8 327 aa11.49□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Gm6268A2A3U9 297 aa11.48□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Def6Q8C2K1 630 aa11.48□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Rwdd1Q9CQK7 243 aa11.48□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 CrebrfQ8CDG5 640 aaKnown RBP11.48□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Iffo2Q8R2V2 512 aa11.47□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Rufy1Q8BIJ7 712 aa11.47□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Mical1Q8VDP3 1048 aa11.47□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Rsph6aQ8CDR2 708 aa11.46□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Mfap1aC0HKD8 439 aaKnown RBP11.46□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Mfap1bC0HKD9 439 aaKnown RBP11.46□□□□□ -0.57
Ncbp3-201ENSMUST00000021135 Fam193aQ8CGI1 1231 aaKnown RBP11.46□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Ccar1Q8CH18 1146 aaKnown RBP11.46□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Rassf8Q8CJ96 419 aa11.46□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Rbm10Q99KG3 930 aaKnown RBP11.45□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Dctn1O08788 1281 aa11.44□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Rsph3aQ3UFY4 516 aa11.44□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Sf3a1Q8K4Z5 791 aaKnown RBP11.44□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Mre11Q61216 706 aa11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Znhit6Q3UFB2 460 aaKnown RBP11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Tpd52l1O54818 204 aa11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Chic2Q9D9G3 165 aa11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Aebp1Q640N1 1128 aa11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Mapk8ip3Q9ESN9 1337 aa11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Gtf2a1Q99PM3 378 aa11.43□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Nolc1E9Q5C9 702 aaKnown RBP11.42□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Smarce1O54941 411 aaKnown RBP11.42□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Vgll3P85442 326 aa11.42□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Utp3Q9JI13 469 aaKnown RBP11.41□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Tpm1P58771 284 aa11.4□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Dixdc1Q80Y83 711 aa11.4□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 HnrnpuQ8VEK3 800 aaKnown RBP11.4□□□□□ -0.58
Ncbp3-201ENSMUST00000021135 Sycp1Q62209 993 aa11.39□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Kif3aP28741 701 aa11.39□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Npm1Q61937 292 aaKnown RBP11.39□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 GorabQ8BRM2 368 aa11.38□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Tnnt1O88346 262 aa11.38□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Glipr1l2Q9CQ35 332 aa11.38□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Rgl3Q3UYI5 709 aa11.37□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Plagl1Q9JLQ4 704 aa11.37□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 NudcO35685 332 aaKnown RBP11.37□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Isy1Q69ZQ2 285 aaKnown RBP11.37□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Ccer1Q9CQL2 403 aa11.37□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 1700019A02RikA0A087WPV9 146 aa11.37□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 A0A0U1RNP2 1173 aa11.36□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Mns1Q61884 491 aa11.36□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Atp6v1dP57746 247 aa11.35□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Ak7Q9D2H2 614 aa11.35□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Gabpb2P81069 414 aa11.35□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Fkbp15Q6P9Q6 1216 aaKnown RBP11.34□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Tpm4Q6IRU2 248 aa11.34□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 U2surpQ6NV83 1029 aaKnown RBP11.33□□□□□ -0.59
Ncbp3-201ENSMUST00000021135 Gcom1E9PZ54 550 aa11.33□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 MyzapQ3UIJ9 466 aa11.33□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Gripap1Q8VD04 806 aa11.33□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Sh3bgrQ9WUZ7 214 aa11.33□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 MecomP14404 1042 aa11.32□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Pde3bQ61409 1100 aa11.31□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Clstn2Q9ER65 966 aa11.31□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Kif4P33174 1231 aa11.31□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Cep164Q5DU05 1446 aa11.31□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Sparcl1P70663 650 aa11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Map3k7clP58500 142 aa11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Sart3Q9JLI8 962 aaKnown RBP11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Ncbp3Q8BZR9 615 aaKnown RBP11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Cluap1Q8R3P7 413 aa11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Ipo7Q9EPL8 1038 aaKnown RBP11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 EzrP26040 586 aaKnown RBP11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Kif3cO35066 796 aa11.3□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Hap1O35668 628 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Card11Q8CIS0 1159 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 DmtnQ9WV69 405 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Ccdc173A0JLY1 547 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 St18Q80TY4 1045 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 OptnQ8K3K8 584 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 BlmO88700 1416 aa11.29□□□□□ -0.6
Ncbp3-201ENSMUST00000021135 Casq1O09165 405 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms