RNA–Protein interactions for RNA: ENSMUST00000017290.10

Brca1-201, Transcript of Breast cancer type 1 susceptibility protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Brca1, Length 6,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1-201ENSMUST00000017290 Tpm3P21107 285 aaKnown RBP10.57□□□□□ -0.72
Brca1-201ENSMUST00000017290 Stag3O70576 1240 aa10.56□□□□□ -0.72
Brca1-201ENSMUST00000017290 RdxP26043 583 aaKnown RBP10.56□□□□□ -0.72
Brca1-201ENSMUST00000017290 Eif4g2Q62448 906 aaKnown RBP10.55□□□□□ -0.72
Brca1-201ENSMUST00000017290 Iqcf3Q9D498 203 aa10.55□□□□□ -0.72
Brca1-201ENSMUST00000017290 Nol10Q5RJG1 687 aaKnown RBP10.54□□□□□ -0.72
Brca1-201ENSMUST00000017290 Clstn2Q9ER65 966 aa10.54□□□□□ -0.72
Brca1-201ENSMUST00000017290 Stk24Q99KH8 431 aa10.54□□□□□ -0.72
Brca1-201ENSMUST00000017290 KnstrnQ9D9Z1 312 aaKnown RBP10.54□□□□□ -0.72
Brca1-201ENSMUST00000017290 Map7d2A2AG50 781 aa10.54□□□□□ -0.72
Brca1-201ENSMUST00000017290 Trim30aP15533 496 aa10.53□□□□□ -0.72
Brca1-201ENSMUST00000017290 Dnai2A2AC93 623 aa10.53□□□□□ -0.72
Brca1-201ENSMUST00000017290 Kri1Q8VDQ9 704 aaKnown RBP10.53□□□□□ -0.72
Brca1-201ENSMUST00000017290 Tpd52l1O54818 204 aa10.53□□□□□ -0.72
Brca1-201ENSMUST00000017290 Fnbp4Q6ZQ03 1031 aa10.53□□□□□ -0.72
Brca1-201ENSMUST00000017290 Rsph6aQ8CDR2 708 aa10.53□□□□□ -0.72
Brca1-201ENSMUST00000017290 MecomP14404 1042 aa10.52□□□□□ -0.72
Brca1-201ENSMUST00000017290 Becn1O88597 448 aa10.52□□□□□ -0.73
Brca1-201ENSMUST00000017290 Ccer2J3QPU5 274 aa10.52□□□□□ -0.73
Brca1-201ENSMUST00000017290 Mex3cQ05A36 652 aaKnown RBP10.51□□□□□ -0.73
Brca1-201ENSMUST00000017290 Chmp4bQ9D8B3 224 aaKnown RBP10.51□□□□□ -0.73
Brca1-201ENSMUST00000017290 NudcO35685 332 aaKnown RBP10.5□□□□□ -0.73
Brca1-201ENSMUST00000017290 Ipo4Q8VI75 1082 aa10.5□□□□□ -0.73
Brca1-201ENSMUST00000017290 Znf704Q9ERQ3 566 aa10.49□□□□□ -0.73
Brca1-201ENSMUST00000017290 Rtf1A2AQ19 715 aaKnown RBP10.49□□□□□ -0.73
Brca1-201ENSMUST00000017290 SlkO54988 1233 aa10.49□□□□□ -0.73
Brca1-201ENSMUST00000017290 Mroh3A0A1D5RM54 893 aa10.49□□□□□ -0.73
Brca1-201ENSMUST00000017290 A0A0U1RNP2 1173 aa10.48□□□□□ -0.73
Brca1-201ENSMUST00000017290 Card11Q8CIS0 1159 aa10.48□□□□□ -0.73
Brca1-201ENSMUST00000017290 Znf330Q922H9 316 aa10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Chmp3Q9CQ10 224 aa10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Rrp12Q6P5B0 1295 aaKnown RBP10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Mfap1aC0HKD8 439 aaKnown RBP10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Mfap1bC0HKD9 439 aaKnown RBP10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Brpf1B2RRD7 1212 aa10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 1700123L14RikQ3V2K7 440 aa10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Tpm4Q6IRU2 248 aa10.47□□□□□ -0.73
Brca1-201ENSMUST00000017290 Odf2A3KGV1 830 aaKnown RBP10.46□□□□□ -0.74
Brca1-201ENSMUST00000017290 GorabQ8BRM2 368 aa10.46□□□□□ -0.74
Brca1-201ENSMUST00000017290 Ccdc43Q9CR29 222 aaKnown RBP10.46□□□□□ -0.74
Brca1-201ENSMUST00000017290 Wdr78E9PYY5 807 aa10.46□□□□□ -0.74
Brca1-201ENSMUST00000017290 BlmO88700 1416 aa10.46□□□□□ -0.74
Brca1-201ENSMUST00000017290 Ccer1Q9CQL2 403 aa10.45□□□□□ -0.74
Brca1-201ENSMUST00000017290 BbxQ8VBW5 907 aa10.45□□□□□ -0.74
Brca1-201ENSMUST00000017290 Cluap1Q8R3P7 413 aa10.44□□□□□ -0.74
Brca1-201ENSMUST00000017290 SafbD3YXK2 937 aaKnown RBP10.44□□□□□ -0.74
Brca1-201ENSMUST00000017290 HnrnpuQ8VEK3 800 aaKnown RBP10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 Tmco5bQ80X59 307 aa10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 CalrP14211 416 aaKnown RBP10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 Ccdc96Q9CR92 584 aa10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 Krt82Q99M74 516 aa10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 Tpm2P58774 284 aa10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 Sart3Q9JLI8 962 aaKnown RBP10.43□□□□□ -0.74
Brca1-201ENSMUST00000017290 Chrna2Q91X60 512 aa10.42□□□□□ -0.74
Brca1-201ENSMUST00000017290 Sox12Q04890 314 aa10.41□□□□□ -0.74
Brca1-201ENSMUST00000017290 Gabpb2P81069 414 aa10.41□□□□□ -0.74
Brca1-201ENSMUST00000017290 Q3TQI7 289 aaKnown RBP10.41□□□□□ -0.74
Brca1-201ENSMUST00000017290 Gm21969J3QJZ1 289 aa10.39□□□□□ -0.75
Brca1-201ENSMUST00000017290 Fbxo2Q80UW2 297 aa10.39□□□□□ -0.75
Brca1-201ENSMUST00000017290 Pibf1E9Q6K3 756 aa10.39□□□□□ -0.75
Brca1-201ENSMUST00000017290 Dnai1Q8C0M8 701 aa10.38□□□□□ -0.75
Brca1-201ENSMUST00000017290 Rwdd1Q9CQK7 243 aa10.38□□□□□ -0.75
Brca1-201ENSMUST00000017290 PtmsQ9D0J8 101 aaKnown RBP10.38□□□□□ -0.75
Brca1-201ENSMUST00000017290 Polr3gQ6NXY9 223 aa10.38□□□□□ -0.75
Brca1-201ENSMUST00000017290 Tpm1P58771 284 aa10.37□□□□□ -0.75
Brca1-201ENSMUST00000017290 Stk26Q99JT2 416 aa10.37□□□□□ -0.75
Brca1-201ENSMUST00000017290 Supt16hQ920B9 1047 aa10.37□□□□□ -0.75
Brca1-201ENSMUST00000017290 Ubl4bQ9CQ84 188 aa10.37□□□□□ -0.75
Brca1-201ENSMUST00000017290 Sf3a1Q8K4Z5 791 aaKnown RBP10.36□□□□□ -0.75
Brca1-201ENSMUST00000017290 Speer4f1Q9D5Q6 258 aa10.36□□□□□ -0.75
Brca1-201ENSMUST00000017290 Ccdc47Q9D024 483 aaKnown RBP10.36□□□□□ -0.75
Brca1-201ENSMUST00000017290 Ccdc34Q3UI66 367 aa10.36□□□□□ -0.75
Brca1-201ENSMUST00000017290 Rufy1Q8BIJ7 712 aa10.36□□□□□ -0.75
Brca1-201ENSMUST00000017290 Sycp1Q62209 993 aa10.36□□□□□ -0.75
Brca1-201ENSMUST00000017290 Smarce1O54941 411 aaKnown RBP10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 Znf771Q8BJ90 317 aa10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 FosbP13346 338 aa10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 Ciz1Q8VEH2 845 aa10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 Rrp7aQ9D1C9 280 aaKnown RBP10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 Zrsr2Q62377 462 aaKnown RBP10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 Ccar1Q8CH18 1146 aaKnown RBP10.35□□□□□ -0.75
Brca1-201ENSMUST00000017290 VgfQ0VGU4 617 aa10.34□□□□□ -0.75
Brca1-201ENSMUST00000017290 Birc3O08863 600 aa10.34□□□□□ -0.75
Brca1-201ENSMUST00000017290 Nap1l1P28656 391 aaKnown RBP10.34□□□□□ -0.75
Brca1-201ENSMUST00000017290 Aebp2Q9Z248 504 aaKnown RBP10.34□□□□□ -0.75
Brca1-201ENSMUST00000017290 Dusp9Q7TNL7 452 aa10.33□□□□□ -0.76
Brca1-201ENSMUST00000017290 Pnmal2G3X9N3 661 aa10.32□□□□□ -0.76
Brca1-201ENSMUST00000017290 Slc4a10Q5DTL9 1118 aa10.32□□□□□ -0.76
Brca1-201ENSMUST00000017290 Znf526Q8BI66 675 aa10.32□□□□□ -0.76
Brca1-201ENSMUST00000017290 Cspp1B2RX88 1205 aa10.32□□□□□ -0.76
Brca1-201ENSMUST00000017290 Dhx16G3X8X0 1044 aaKnown RBP10.32□□□□□ -0.76
Brca1-201ENSMUST00000017290 March6Q6ZQ89 909 aa10.31□□□□□ -0.76
Brca1-201ENSMUST00000017290 Utp3Q9JI13 469 aaKnown RBP10.31□□□□□ -0.76
Brca1-201ENSMUST00000017290 Pde3bQ61409 1100 aa10.31□□□□□ -0.76
Brca1-201ENSMUST00000017290 Themis2Q91YX0 663 aa10.3□□□□□ -0.76
Brca1-201ENSMUST00000017290 Chmp5Q9D7S9 219 aa10.3□□□□□ -0.76
Brca1-201ENSMUST00000017290 Ipo8Q7TMY7 1010 aa10.3□□□□□ -0.76
Brca1-201ENSMUST00000017290 EspnQ9ET47 871 aa10.3□□□□□ -0.76
Brca1-201ENSMUST00000017290 Erich4Q3UNU4 136 aa10.3□□□□□ -0.76
Brca1-201ENSMUST00000017290 AppP12023 770 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms