RNA–Protein interactions for RNA: ENSMUST00000017290.10

Brca1-201, Transcript of Breast cancer type 1 susceptibility protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Brca1, Length 6,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1-201ENSMUST00000017290 Rhox8Q6VSS7 320 aa14.44□□□□□ -0.1
Brca1-201ENSMUST00000017290 Ehmt2Q9Z148 1263 aaKnown RBP13.58□□□□□ -0.24
Brca1-201ENSMUST00000017290 Amer1Q7TS75 1132 aa13.55□□□□□ -0.24
Brca1-201ENSMUST00000017290 Cngb1E1AZ71 1325 aa13.54□□□□□ -0.24
Brca1-201ENSMUST00000017290 Pelp1Q9DBD5 1123 aaKnown RBP13.53□□□□□ -0.24
Brca1-201ENSMUST00000017290 Wdr66E9Q743 1299 aa13.41□□□□□ -0.26
Brca1-201ENSMUST00000017290 Las1lA2BE28 776 aaKnown RBP13.35□□□□□ -0.27
Brca1-201ENSMUST00000017290 Rpgrip1Q9EPQ2 1331 aa13.32□□□□□ -0.28
Brca1-201ENSMUST00000017290 Ube2uB1AUC4 352 aa13.31□□□□□ -0.28
Brca1-201ENSMUST00000017290 Zeb1Q64318 1117 aa13.09□□□□□ -0.31
Brca1-201ENSMUST00000017290 4930567H17RikQ3V0K5 233 aa12.98□□□□□ -0.33
Brca1-201ENSMUST00000017290 Ttbk1Q6PCN3 1308 aa12.94□□□□□ -0.34
Brca1-201ENSMUST00000017290 Slc24a1Q91WD8 1130 aa12.82□□□□□ -0.36
Brca1-201ENSMUST00000017290 Esf1Q3V1V3 845 aaKnown RBP12.75□□□□□ -0.37
Brca1-201ENSMUST00000017290 CenpbP27790 599 aa12.71□□□□□ -0.38
Brca1-201ENSMUST00000017290 Gab3Q8BSM5 595 aa12.7□□□□□ -0.38
Brca1-201ENSMUST00000017290 4933416C03RikQ3V063 378 aa12.66□□□□□ -0.38
Brca1-201ENSMUST00000017290 Npm2Q80W85 207 aa12.65□□□□□ -0.38
Brca1-201ENSMUST00000017290 Myt1lP97500 1187 aa12.6□□□□□ -0.39
Brca1-201ENSMUST00000017290 Ccdc136Q3TVA9 1136 aa12.58□□□□□ -0.4
Brca1-201ENSMUST00000017290 Stra8P70278 393 aa12.33□□□□□ -0.44
Brca1-201ENSMUST00000017290 Eif5bQ05D44 1216 aaKnown RBP12.33□□□□□ -0.44
Brca1-201ENSMUST00000017290 UbtfP25976 765 aaKnown RBP12.3□□□□□ -0.44
Brca1-201ENSMUST00000017290 Neurod1Q60867 357 aa12.21□□□□□ -0.45
Brca1-201ENSMUST00000017290 NeflP08551 543 aa12.21□□□□□ -0.46
Brca1-201ENSMUST00000017290 Myt1Q8CFC2 1127 aa12.2□□□□□ -0.46
Brca1-201ENSMUST00000017290 Os9Q8K2C7 672 aa12.19□□□□□ -0.46
Brca1-201ENSMUST00000017290 NrdcQ8BHG1 1161 aa12.14□□□□□ -0.47
Brca1-201ENSMUST00000017290 Ppargc1bQ8VHJ7 1014 aa12.1□□□□□ -0.47
Brca1-201ENSMUST00000017290 Trim41Q5NCC3 630 aa12.05□□□□□ -0.48
Brca1-201ENSMUST00000017290 Cdk11bP24788 784 aaKnown RBP12.04□□□□□ -0.48
Brca1-201ENSMUST00000017290 Anp32bQ9EST5 272 aaKnown RBP12.03□□□□□ -0.48
Brca1-201ENSMUST00000017290 Chic1Q8CBW7 227 aa12.03□□□□□ -0.48
Brca1-201ENSMUST00000017290 CatipB9EKE5 520 aa12.01□□□□□ -0.49
Brca1-201ENSMUST00000017290 HrcG5E8J6 738 aa11.97□□□□□ -0.49
Brca1-201ENSMUST00000017290 Ap3b1Q9Z1T1 1105 aa11.96□□□□□ -0.49
Brca1-201ENSMUST00000017290 NefmP08553 848 aa11.95□□□□□ -0.5
Brca1-201ENSMUST00000017290 ArxO35085 564 aa11.94□□□□□ -0.5
Brca1-201ENSMUST00000017290 Ythdc1E9Q5K9 736 aaKnown RBP11.93□□□□□ -0.5
Brca1-201ENSMUST00000017290 NclP09405 707 aaKnown RBP11.93□□□□□ -0.5
Brca1-201ENSMUST00000017290 Fam50aQ9WV03 339 aaKnown RBP11.92□□□□□ -0.5
Brca1-201ENSMUST00000017290 DaxxO35613 739 aa11.92□□□□□ -0.5
Brca1-201ENSMUST00000017290 Il27Q8K3I6 234 aa11.89□□□□□ -0.51
Brca1-201ENSMUST00000017290 Acin1Q9JIX8 1338 aaKnown RBP11.88□□□□□ -0.51
Brca1-201ENSMUST00000017290 Zbtb7cQ8VCZ7 619 aa11.86□□□□□ -0.51
Brca1-201ENSMUST00000017290 Tnnt3Q9QZ47 272 aa11.86□□□□□ -0.51
Brca1-201ENSMUST00000017290 Lmod3E9QA62 571 aa11.85□□□□□ -0.51
Brca1-201ENSMUST00000017290 Nop58Q6DFW4 536 aaKnown RBP11.84□□□□□ -0.51
Brca1-201ENSMUST00000017290 Polr3glQ8R0C0 218 aa11.79□□□□□ -0.52
Brca1-201ENSMUST00000017290 Prdm10Q3UTQ7 1184 aa11.78□□□□□ -0.52
Brca1-201ENSMUST00000017290 Zbtb4Q5F293 982 aa11.77□□□□□ -0.52
Brca1-201ENSMUST00000017290 DiexfQ8BTT6 772 aaKnown RBP11.76□□□□□ -0.53
Brca1-201ENSMUST00000017290 Gm13697A2AK42 830 aa11.76□□□□□ -0.53
Brca1-201ENSMUST00000017290 Rtl5Q5DTT4 599 aa11.72□□□□□ -0.53
Brca1-201ENSMUST00000017290 Rangap1P46061 589 aaKnown RBP11.69□□□□□ -0.54
Brca1-201ENSMUST00000017290 Atp1b4Q99ME6 356 aa11.68□□□□□ -0.54
Brca1-201ENSMUST00000017290 Pcgf6Q99NA9 353 aa11.65□□□□□ -0.54
Brca1-201ENSMUST00000017290 Nlrp6Q91WS2 869 aa11.64□□□□□ -0.55
Brca1-201ENSMUST00000017290 Ifnlr1Q8CGK5 535 aa11.63□□□□□ -0.55
Brca1-201ENSMUST00000017290 Upf2A2AT37 1269 aaKnown RBP11.62□□□□□ -0.55
Brca1-201ENSMUST00000017290 Hnrnpul2Q00PI9 745 aaKnown RBP11.62□□□□□ -0.55
Brca1-201ENSMUST00000017290 Vsig10D3YX43 558 aa11.61□□□□□ -0.55
Brca1-201ENSMUST00000017290 Hsp90aa1P07901 733 aaKnown RBP11.6□□□□□ -0.55
Brca1-201ENSMUST00000017290 Plppr3Q7TPB0 716 aa11.6□□□□□ -0.55
Brca1-201ENSMUST00000017290 Gm38655A0A286YDK6 273 aa11.6□□□□□ -0.55
Brca1-201ENSMUST00000017290 Csrnp3P59055 597 aa11.59□□□□□ -0.55
Brca1-201ENSMUST00000017290 Erich6D3Z6S9 713 aa11.57□□□□□ -0.56
Brca1-201ENSMUST00000017290 TonslQ6NZL6 1363 aa11.53□□□□□ -0.56
Brca1-201ENSMUST00000017290 Gm13695A2AK44 830 aa11.52□□□□□ -0.57
Brca1-201ENSMUST00000017290 Supt5hO55201 1082 aaKnown RBP11.52□□□□□ -0.57
Brca1-201ENSMUST00000017290 Mapk8ip2Q9ERE9 830 aa11.51□□□□□ -0.57
Brca1-201ENSMUST00000017290 Anp32aO35381 247 aa11.49□□□□□ -0.57
Brca1-201ENSMUST00000017290 DekQ7TNV0 380 aaKnown RBP11.48□□□□□ -0.57
Brca1-201ENSMUST00000017290 Lmod2Q3UHZ5 550 aa11.37□□□□□ -0.59
Brca1-201ENSMUST00000017290 Znf326O88291 580 aa11.34□□□□□ -0.59
Brca1-201ENSMUST00000017290 Arid4bA2CG63 1314 aaKnown RBP11.32□□□□□ -0.6
Brca1-201ENSMUST00000017290 Irx6Q9ER75 438 aa11.31□□□□□ -0.6
Brca1-201ENSMUST00000017290 Clstn1Q9EPL2 979 aa11.29□□□□□ -0.6
Brca1-201ENSMUST00000017290 Rad21Q61550 635 aaKnown RBP11.29□□□□□ -0.6
Brca1-201ENSMUST00000017290 Znf316Q6PGE4 1016 aa11.27□□□□□ -0.6
Brca1-201ENSMUST00000017290 Trim44Q9QXA7 346 aa11.26□□□□□ -0.61
Brca1-201ENSMUST00000017290 Ppp4r2Q0VGB7 417 aa11.25□□□□□ -0.61
Brca1-201ENSMUST00000017290 Trim26Q99PN3 545 aa11.25□□□□□ -0.61
Brca1-201ENSMUST00000017290 Fgd1P52734 960 aa11.24□□□□□ -0.61
Brca1-201ENSMUST00000017290 Mier1Q5UAK0 511 aa11.24□□□□□ -0.61
Brca1-201ENSMUST00000017290 PtmaP26350 111 aa11.22□□□□□ -0.61
Brca1-201ENSMUST00000017290 Prm3Q62100 101 aa11.21□□□□□ -0.61
Brca1-201ENSMUST00000017290 Fkbp15Q6P9Q6 1216 aaKnown RBP11.2□□□□□ -0.62
Brca1-201ENSMUST00000017290 Slc4a1apE9PX68 744 aa11.19□□□□□ -0.62
Brca1-201ENSMUST00000017290 Plekhg3Q4VAC9 1341 aa11.19□□□□□ -0.62
Brca1-201ENSMUST00000017290 Rtn4Q99P72 1162 aaKnown RBP11.17□□□□□ -0.62
Brca1-201ENSMUST00000017290 Hdac5Q9Z2V6 1113 aa11.16□□□□□ -0.62
Brca1-201ENSMUST00000017290 BccipQ9CWI3 316 aa11.15□□□□□ -0.62
Brca1-201ENSMUST00000017290 ClspnQ80YR7 1315 aa11.12□□□□□ -0.63
Brca1-201ENSMUST00000017290 Hsp90ab1P11499 724 aaKnown RBP11.1□□□□□ -0.63
Brca1-201ENSMUST00000017290 Calr4Q3TQS0 420 aa11.09□□□□□ -0.63
Brca1-201ENSMUST00000017290 P3h3Q8CG70 732 aa11.08□□□□□ -0.64
Brca1-201ENSMUST00000017290 Eid3Q3V124 375 aa11.08□□□□□ -0.64
Brca1-201ENSMUST00000017290 Ccdc180J3QNE4 1664 aa11.08□□□□□ -0.64
Brca1-201ENSMUST00000017290 PnnO35691 725 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 145.5 ms