RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Sart1Q9Z315 806 aaKnown RBP10.88□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 PtprtQ99M80 1454 aa10.87□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Atp10dQ8K2X1 1416 aa10.86□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Lemd3Q9WU40 921 aa10.84□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Prex2Q3LAC4 1598 aa10.83□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Fancd2Q80V62 1450 aa10.83□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 3425401B19RikD3Z1D3 1412 aa10.82□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Cep170Q6A065 1588 aa10.81□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Znf608Q56A10 1511 aa10.81□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Adgrl3Q80TS3 1537 aa10.81□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Plekhh2Q8C115 1491 aa10.8□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Arhgap5P97393 1501 aa10.79□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 A2mQ6GQT1 1474 aa10.78□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Arhgef11Q68FM7 1552 aa10.78□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Ncapd3Q6ZQK0 1506 aa10.78□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Kdm5bQ80Y84 1544 aa10.78□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Mia2Q91ZV0 1396 aa10.78□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 AI481877A2ALV5 1481 aa10.78□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Chd1P40201 1711 aa10.77□□□□□ -0.68
Crnkl1-201ENSMUST00000001818 Rrbp1Q99PL5 1605 aaKnown RBP10.77□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Hspa5P20029 655 aaKnown RBP10.77□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Zfp644E9QA22 1323 aa10.76□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Wdr7Q920I9 1489 aa10.76□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Dnajc5P60904 198 aa10.76□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Mroh2aD3Z750 1679 aa10.76□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Abcc5Q9R1X5 1436 aa10.76□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Peg3Q3URU2 1571 aa10.76□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Erich6D3Z6S9 713 aa10.75□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Ccer2J3QPU5 274 aa10.75□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Slc24a1Q91WD8 1130 aa10.75□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Arhgef40Q3UPH7 1517 aa10.75□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Map3k5O35099 1380 aa10.75□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Trappc8E9PWG2 1437 aa10.75□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Col17a1Q07563 1470 aa10.74□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Lmtk2Q3TYD6 1471 aa10.73□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 ClspnQ80YR7 1315 aa10.73□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Map4P27546 1125 aaKnown RBP10.73□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Kif3bQ61771 747 aa10.73□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Mapkbp1Q6NS57 1503 aa10.73□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Nop58Q6DFW4 536 aaKnown RBP10.72□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Mlh3A0A1Y7VMP7 1443 aa10.72□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Zbtb4Q5F293 982 aa10.72□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 UacaQ8CGB3 1411 aa10.72□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Clstn2Q9ER65 966 aa10.71□□□□□ -0.69
Crnkl1-201ENSMUST00000001818 Trak1Q6PD31 939 aa10.71□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Kiaa1551Q5DTW7 1521 aa10.7□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Mphosph9A6H5Y1 991 aa10.7□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Naip2Q9QUK4 1447 aa10.7□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Lrrc9Q8CDN9 1456 aa10.7□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Adcy10Q8C0T9 1614 aa10.7□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Zcchc11B2RX14 1644 aaKnown RBP10.69□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Gm13697A2AK42 830 aa10.68□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Spag9Q58A65 1321 aaKnown RBP10.67□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Caskin1Q6P9K8 1431 aa10.67□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Nup155Q99P88 1391 aaKnown RBP10.67□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Fhad1A6PWD2 1420 aa10.67□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Il16O54824 1322 aa10.66□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Pkd2O35245 966 aa10.66□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Safb2Q80YR5 991 aaKnown RBP10.66□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Cdc42bpaQ3UU96 1719 aa10.65□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Sin3aQ60520 1274 aaKnown RBP10.65□□□□□ -0.7
Crnkl1-201ENSMUST00000001818 Gcc2Q8CHG3 1679 aa10.65□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Prdm16A2A935 1275 aa10.64□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 NhsB1AV60 1647 aa10.64□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Kdm6bQ5NCY0 1641 aa10.64□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Pcdh10E9PXQ7 1057 aa10.63□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Vps8Q0P5W1 1427 aa10.63□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Rgl3Q3UYI5 709 aa10.63□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Depdc5P61460 1591 aa10.63□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Gm38655A0A286YDK6 273 aa10.63□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Ak9G3UYQ4 1894 aa10.62□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Pde4cQ3UEI1 686 aa10.61□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Adgrb2Q8CGM1 1561 aa10.61□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Ttll5Q8CHB8 1328 aa10.61□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Os9Q8K2C7 672 aa10.6□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 Stk24Q99KH8 431 aa10.59□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 OvosQ3UU35 1456 aa10.59□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 MyclP10166 368 aa10.59□□□□□ -0.71
Crnkl1-201ENSMUST00000001818 MlecQ6ZQI3 291 aaKnown RBP10.58□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Grwd1Q810D6 446 aaKnown RBP10.58□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Fam208aQ69ZR9 1610 aaKnown RBP10.57□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Abca8bQ8K440 1620 aa10.57□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Afap1Q80YS6 731 aa10.57□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Cul7Q8VE73 1689 aa10.56□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Ptch1Q61115 1434 aa10.56□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Zfyve16Q80U44 1528 aa10.56□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Setbp1Q9Z180 1582 aa10.55□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Atp1b4Q99ME6 356 aa10.55□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Mroh3A0A1D5RM54 893 aa10.54□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Rfx7F8VPJ6 1459 aa10.54□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Kdm3bQ6ZPY7 1562 aa10.53□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Ssh2Q5SW75 1423 aa10.53□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Dhx9O70133 1380 aaKnown RBP10.53□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Cfap74Q3UY96 1578 aa10.53□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Csrnp3P59055 597 aa10.53□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Dnajc5gQ8C632 165 aa10.53□□□□□ -0.72
Crnkl1-201ENSMUST00000001818 Rnf17Q99MV7 1640 aa10.52□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Kdm2aP59997 1161 aa10.52□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 P3h3Q8CG70 732 aa10.52□□□□□ -0.73
Crnkl1-201ENSMUST00000001818 Pprc1Q6NZN1 1644 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms