RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 GLN4P13188 809 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 ABF1P14164 731 aa3.13□□□□□ -1.91
snR42snR42 AMD1P15274 810 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 SCL1P21243 252 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 ATP12P22135 325 aa3.13□□□□□ -1.91
snR42snR42 TSR4P25040 408 aa3.13□□□□□ -1.91
snR42snR42 PHO84P25297 587 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 YCR099CP25657 155 aa3.13□□□□□ -1.91
snR42snR42 URA7P28274 579 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 HOG1P32485 435 aa3.13□□□□□ -1.91
snR42snR42 SMI1P32566 505 aa3.13□□□□□ -1.91
snR42snR42 RRP1P35178 278 aaPredicted RBP3.13□□□□□ -1.91
snR42snR42 EMC3P36039 253 aa3.13□□□□□ -1.91
snR42snR42 RPF2P36160 344 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 ARA1P38115 344 aa3.13□□□□□ -1.91
snR42snR42 MGE1P38523 228 aa3.13□□□□□ -1.91
snR42snR42 YAL037WP39728 267 aa3.13□□□□□ -1.91
snR42snR42 GIM4P40005 111 aaKnown RBP3.13□□□□□ -1.91
snR42snR42 INA22P40576 216 aa3.13□□□□□ -1.91
snR42snR42 YFL012WP43580 148 aa3.13□□□□□ -1.91
snR42snR42 NMD5P46970 1048 aa3.13□□□□□ -1.91
snR42snR42 BLS1Q06071 122 aa3.13□□□□□ -1.91
snR42snR42 IMA2Q08295 589 aa3.13□□□□□ -1.91
snR42snR42 YDR056CQ12025 205 aa3.13□□□□□ -1.91
snR42snR42 YDR262WQ12331 272 aa3.13□□□□□ -1.91
snR42snR42 NPC2Q12408 173 aa3.13□□□□□ -1.91
snR42snR42 SKM1Q12469 655 aa3.13□□□□□ -1.91
snR42snR42 GCR1P07261 785 aa3.12□□□□□ -1.91
snR42snR42 CBF1P17106 351 aa3.12□□□□□ -1.91
snR42snR42 STE4P18851 423 aa3.12□□□□□ -1.91
snR42snR42 HOP1P20050 605 aa3.12□□□□□ -1.91
snR42snR42 DAL82P21705 255 aa3.12□□□□□ -1.91
snR42snR42 VPS34P22543 875 aa3.12□□□□□ -1.91
snR42snR42 CLB1P24868 471 aa3.12□□□□□ -1.91
snR42snR42 MF(ALPHA)2P32435 120 aa3.12□□□□□ -1.91
snR42snR42 ATP11P32453 318 aa3.12□□□□□ -1.91
snR42snR42 YEL043WP32618 956 aa3.12□□□□□ -1.91
snR42snR42 NTR2P36118 322 aaPredicted RBP3.12□□□□□ -1.91
snR42snR42 YSW1P38280 609 aa3.12□□□□□ -1.91
snR42snR42 MMS21P38632 267 aa3.12□□□□□ -1.91
snR42snR42 GND1P38720 489 aaKnown RBP3.12□□□□□ -1.91
snR42snR42 YHR045WP38775 560 aa3.12□□□□□ -1.91
snR42snR42 GIC1P38785 314 aa3.12□□□□□ -1.91
snR42snR42 YHR182WP38870 785 aa3.12□□□□□ -1.91
snR42snR42 LYS1P38998 373 aaRIP-Chip data3.12□□□□□ -1.91not detected
snR42snR42 TIM17P39515 158 aa3.12□□□□□ -1.91
snR42snR42 SEO1P39709 593 aa3.12□□□□□ -1.91
snR42snR42 YEL073CP39974 107 aa3.12□□□□□ -1.91
snR42snR42 YER158CP40095 573 aa3.12□□□□□ -1.91
snR42snR42 UTP18P40362 594 aaPredicted RBP3.12□□□□□ -1.91
snR42snR42 SSU1P41930 458 aa3.12□□□□□ -1.91
snR42snR42 ALK1P43633 760 aaKnown RBP3.12□□□□□ -1.91
snR42snR42 HXT16P47185 567 aa3.12□□□□□ -1.91
snR42snR42 GNP1P48813 663 aa3.12□□□□□ -1.91
snR42snR42 PEX8P53248 589 aa3.12□□□□□ -1.91
snR42snR42 ARE2P53629 642 aaKnown RBP3.12□□□□□ -1.91
snR42snR42 ZRG17P53735 605 aa3.12□□□□□ -1.91
snR42snR42 ECM9Q02202 377 aa3.12□□□□□ -1.91
snR42snR42 VPS60Q03390 229 aa3.12□□□□□ -1.91
snR42snR42 VTI1Q04338 217 aa3.12□□□□□ -1.91
snR42snR42 YMR027WQ04371 470 aa3.12□□□□□ -1.91
snR42snR42 SSL1Q04673 461 aaPredicted RBP3.12□□□□□ -1.91
snR42snR42 ADE13Q05911 482 aaKnown RBP3.12□□□□□ -1.91
snR42snR42 DIC1Q06143 298 aa3.12□□□□□ -1.91
snR42snR42 CRN1Q06440 651 aa3.12□□□□□ -1.91
snR42snR42 GUP2Q08929 609 aa3.12□□□□□ -1.91
snR42snR42 NUS1Q12063 375 aa3.12□□□□□ -1.91
snR42snR42 SUL2Q12325 893 aa3.12□□□□□ -1.91
snR42snR42 YOR012WQ12351 137 aa3.12□□□□□ -1.91
snR42snR42 SEC39Q12745 709 aa3.12□□□□□ -1.91
snR42snR42 CDC8P00572 216 aa3.11□□□□□ -1.91
snR42snR42 TEF1P02994 458 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 GAL4P04386 881 aa3.11□□□□□ -1.91
snR42snR42 RPB2P08518 1224 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 RPL11AP0C0W9 174 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 YML002WP0CF17 737 aa3.11□□□□□ -1.91
snR42snR42 GPA2P10823 449 aa3.11□□□□□ -1.91
snR42snR42 PRP9P19736 530 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 PRE9P23638 258 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 ERG4P25340 473 aa3.11□□□□□ -1.91
snR42snR42 KAR4P25583 335 aa3.11□□□□□ -1.91
snR42snR42 DPB3P27344 201 aa3.11□□□□□ -1.91
snR42snR42 GCG1P32656 232 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 TRM7P38238 310 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 EFM1P38732 585 aa3.11□□□□□ -1.91
snR42snR42 SPF1P39986 1215 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 CFD1P40558 293 aa3.11□□□□□ -1.91
snR42snR42 PFA3P42836 336 aa3.11□□□□□ -1.91
snR42snR42 MRPS18P42847 217 aa3.11□□□□□ -1.91
snR42snR42 TFB2Q02939 513 aa3.11□□□□□ -1.91
snR42snR42 HPT1Q04178 221 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 RRB1Q04225 511 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 CDC123Q05791 360 aa3.11□□□□□ -1.91
snR42snR42 GRS2Q06817 618 aa3.11□□□□□ -1.91
snR42snR42 XYL2Q07993 356 aa3.11□□□□□ -1.91
snR42snR42 CUE5Q08412 411 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 SLD7Q08457 257 aa3.11□□□□□ -1.91
snR42snR42 PFA4Q12006 378 aa3.11□□□□□ -1.91
snR42snR42 RIO1Q12196 484 aaKnown RBP3.11□□□□□ -1.91
snR42snR42 RRP12Q12754 1228 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms