RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	MRPL1	Q04599	285 aa		4.87	□□□□□ -1.63
snR3	snR3	MSC3	Q05812	728 aa		4.87	□□□□□ -1.63
snR3	snR3	TMA10	Q06177	86 aa		4.87	□□□□□ -1.63
snR3	snR3	RTT109	Q07794	436 aa		4.87	□□□□□ -1.63
snR3	snR3	VAM3	Q12241	283 aa		4.87	□□□□□ -1.63
snR3	snR3	ZPS1	Q12512	249 aa		4.87	□□□□□ -1.63
snR3	snR3	LAM4	P38800	1345 aa		4.87	□□□□□ -1.63
snR3	snR3	CBP1	P07252	654 aa		4.86	□□□□□ -1.63
snR3	snR3	GAL7	P08431	366 aa		4.86	□□□□□ -1.63
snR3	snR3	PET111	P08468	800 aa		4.86	□□□□□ -1.63
snR3	snR3	ARO3	P14843	370 aa	Known RBP	4.86	□□□□□ -1.63
snR3	snR3	RNR3	P21672	869 aa	Known RBP	4.86	□□□□□ -1.63
snR3	snR3	GAC1	P28006	793 aa		4.86	□□□□□ -1.63
snR3	snR3	DEF1	P35732	738 aa	Known RBP	4.86	□□□□□ -1.63
snR3	snR3	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
snR3	snR3	PMT6	P42934	759 aa		4.86	□□□□□ -1.63
snR3	snR3	ELP2	P42935	788 aa		4.86	□□□□□ -1.63
snR3	snR3	ECL1	P48235	211 aa		4.86	□□□□□ -1.63
snR3	snR3	BUL1	P48524	976 aa		4.86	□□□□□ -1.63
snR3	snR3	YMR178W	Q03219	274 aa	Known RBP	4.86	□□□□□ -1.63
snR3	snR3	EMI2	Q04409	500 aa	Known RBP	4.86	□□□□□ -1.63
snR3	snR3	Q0010	Q9ZZX9	128 aa		4.86	□□□□□ -1.63
snR3	snR3	CAR1	P00812	333 aa	Known RBP	4.85	□□□□□ -1.63
snR3	snR3	CBP2	P03874	630 aa	Predicted RBP	4.85	□□□□□ -1.63
snR3	snR3	ILV5	P06168	395 aa	Known RBP	4.85	□□□□□ -1.63
snR3	snR3	ALG7	P07286	448 aa		4.85	□□□□□ -1.63
snR3	snR3	PRP2	P20095	876 aa	Predicted RBP	4.85	□□□□□ -1.63
snR3	snR3	RDS1	P25611	832 aa		4.85	□□□□□ -1.63
snR3	snR3	PTC6	P25646	442 aa		4.85	□□□□□ -1.63
snR3	snR3	HIR2	P32480	875 aa		4.85	□□□□□ -1.63
snR3	snR3	GMH1	P36125	273 aa		4.85	□□□□□ -1.63
snR3	snR3	YHL017W	P38745	532 aa		4.85	□□□□□ -1.63
snR3	snR3	OPT1	P40897	799 aa		4.85	□□□□□ -1.63
snR3	snR3	ATG27	P46989	271 aa		4.85	□□□□□ -1.63
snR3	snR3	NUP84	P52891	726 aa		4.85	□□□□□ -1.63
snR3	snR3	YGL108C	P53139	140 aa		4.85	□□□□□ -1.63
snR3	snR3	RIM8	P53179	542 aa		4.85	□□□□□ -1.63
snR3	snR3	WAR1	Q03631	944 aa		4.85	□□□□□ -1.63
snR3	snR3	VPS20	Q04272	221 aa		4.85	□□□□□ -1.63
snR3	snR3	COQ9	Q05779	260 aa		4.85	□□□□□ -1.63
snR3	snR3	NDL1	Q06568	189 aa		4.85	□□□□□ -1.63
snR3	snR3	LEA1	Q08963	238 aa	Predicted RBP	4.85	□□□□□ -1.63
snR3	snR3	TRM13	Q12383	476 aa		4.85	□□□□□ -1.63
snR3	snR3	SRN2	Q99176	213 aa		4.85	□□□□□ -1.63
snR3	snR3	BRR1	Q99177	341 aa	Predicted RBP	4.85	□□□□□ -1.63
snR3	snR3	YLR358C	O13565	187 aa		4.84	□□□□□ -1.63
snR3	snR3	YMR085W	P0CF18	432 aa		4.84	□□□□□ -1.63
snR3	snR3	MRP2	P10663	115 aa	Predicted RBP	4.84	□□□□□ -1.63
snR3	snR3	ELO2	P25358	347 aa		4.84	□□□□□ -1.63
snR3	snR3	PMI40	P29952	429 aa	Known RBP	4.84	□□□□□ -1.63
snR3	snR3	YUH1	P35127	236 aa		4.84	□□□□□ -1.63
snR3	snR3	YER130C	P39959	443 aa		4.84	□□□□□ -1.63
snR3	snR3	RRP46	P53256	223 aa	Predicted RBP	4.84	□□□□□ -1.63
snR3	snR3	ARO10	Q06408	635 aa		4.84	□□□□□ -1.63
snR3	snR3	ECM30	Q06673	1274 aa		4.84	□□□□□ -1.63
snR3	snR3	CYK3	Q07533	885 aa		4.84	□□□□□ -1.63
snR3	snR3	DIS3	Q08162	1001 aa	Known RBP	4.84	□□□□□ -1.63
snR3	snR3	MRH1	Q12117	320 aa	Predicted RBP	4.84	□□□□□ -1.63
snR3	snR3	AHA1	Q12449	350 aa	Known RBP	4.84	□□□□□ -1.63
snR3	snR3	RAD61	Q99359	647 aa		4.84	□□□□□ -1.63
snR3	snR3	PMR1	P13586	950 aa		4.83	□□□□□ -1.64
snR3	snR3	PRP6	P19735	899 aa	Predicted RBP	4.83	□□□□□ -1.64
snR3	snR3	KRE2	P27809	442 aa		4.83	□□□□□ -1.64
snR3	snR3	RIM1	P32445	135 aa	Known RBP	4.83	□□□□□ -1.64
snR3	snR3	LIP5	P32875	414 aa		4.83	□□□□□ -1.64
snR3	snR3	MNN9	P39107	395 aa	Known RBP	4.83	□□□□□ -1.64
snR3	snR3	SSO2	P39926	295 aa		4.83	□□□□□ -1.64
snR3	snR3	NDC80	P40460	691 aa		4.83	□□□□□ -1.64
snR3	snR3	AGX1	P43567	385 aa		4.83	□□□□□ -1.64
snR3	snR3	ASN2	P49090	572 aa	Known RBP	4.83	□□□□□ -1.64
snR3	snR3	YGR126W	P53274	230 aa		4.83	□□□□□ -1.64
snR3	snR3	UTP6	Q02354	440 aa	Known RBP	4.83	□□□□□ -1.64
snR3	snR3	YDR541C	Q03049	344 aa		4.83	□□□□□ -1.64
snR3	snR3	MSC1	Q03104	513 aa		4.83	□□□□□ -1.64
snR3	snR3	YLR413W	Q06689	675 aa		4.83	□□□□□ -1.64
snR3	snR3	GSH2	Q08220	491 aa		4.83	□□□□□ -1.64
snR3	snR3	RUD3	Q12234	484 aa	Known RBP	4.83	□□□□□ -1.64
snR3	snR3	MDM20	Q12387	796 aa	Known RBP	4.83	□□□□□ -1.64
snR3	snR3	RAV1	P47104	1357 aa		4.82	□□□□□ -1.64
snR3	snR3	STE3	P06783	470 aa		4.82	□□□□□ -1.64
snR3	snR3	PPR1	P07272	904 aa	Predicted RBP	4.82	□□□□□ -1.64
snR3	snR3	SAM1	P10659	382 aa	Known RBP	4.82	□□□□□ -1.64
snR3	snR3	RAP1	P11938	827 aa		4.82	□□□□□ -1.64
snR3	snR3	PET18	P25362	215 aa		4.82	□□□□□ -1.64
snR3	snR3	GLG1	P36143	616 aa		4.82	□□□□□ -1.64
snR3	snR3	ASC1	P38011	319 aa	Known RBP	4.82	□□□□□ -1.64
snR3	snR3	OLA1	P38219	394 aa	Known RBP	4.82	□□□□□ -1.64
snR3	snR3	VHC1	P38329	1120 aa		4.82	□□□□□ -1.64
snR3	snR3	TIF5	P38431	405 aa	Known RBP	4.82	□□□□□ -1.64
snR3	snR3	MBB1	P39534	108 aa		4.82	□□□□□ -1.64
snR3	snR3	GCD10	P41814	478 aa		4.82	□□□□□ -1.64
snR3	snR3	NMD5	P46970	1048 aa		4.82	□□□□□ -1.64
snR3	snR3	AIM22	P47051	409 aa		4.82	□□□□□ -1.64
snR3	snR3	ABZ2	Q03266	374 aa		4.82	□□□□□ -1.64
snR3	snR3	HRD3	Q05787	833 aa		4.82	□□□□□ -1.64
snR3	snR3	KAP95	Q06142	861 aa	Known RBP	4.82	□□□□□ -1.64
snR3	snR3	AIM39	Q08223	395 aa		4.82	□□□□□ -1.64
snR3	snR3	APC5	Q08683	685 aa		4.82	□□□□□ -1.64
snR3	snR3	PMA1	P05030	918 aa	Known RBP	4.81	□□□□□ -1.64
snR3	snR3	SUP35	P05453	685 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms