RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W NUP85P46673 744 aa9.14□□□□□ -0.95
BRR1YPR057W ATH1P48016 1211 aa9.14□□□□□ -0.95
BRR1YPR057W MDM34P53083 459 aa9.14□□□□□ -0.95
BRR1YPR057W GPI1P53306 609 aa9.14□□□□□ -0.95
BRR1YPR057W YNL260CP53846 198 aa9.14□□□□□ -0.95
BRR1YPR057W TDA7P53882 636 aaPredicted RBP9.14□□□□□ -0.95
BRR1YPR057W YNL033WP53964 284 aa9.14□□□□□ -0.95
BRR1YPR057W YNL019CP53975 284 aa9.14□□□□□ -0.95
BRR1YPR057W SDH1Q00711 640 aa9.14□□□□□ -0.95
BRR1YPR057W EMI1Q04406 187 aa9.14□□□□□ -0.95
BRR1YPR057W FUM1P08417 488 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W RPS4AP0CX35 261 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W RPS4BP0CX36 261 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W MRP13P12686 339 aa9.13□□□□□ -0.95
BRR1YPR057W STE6P12866 1290 aa9.13□□□□□ -0.95
BRR1YPR057W CLN2P20438 545 aa9.13□□□□□ -0.95
BRR1YPR057W YSR3P23501 404 aa9.13□□□□□ -0.95
BRR1YPR057W YKR078WP36158 585 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W PPX1P38698 397 aa9.13□□□□□ -0.95
BRR1YPR057W YHR078WP38799 552 aa9.13□□□□□ -0.95
BRR1YPR057W LSM5P40089 93 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W MEP2P41948 499 aa9.13□□□□□ -0.95
BRR1YPR057W YJR149WP47177 404 aa9.13□□□□□ -0.95
BRR1YPR057W ZRG17P53735 605 aa9.13□□□□□ -0.95
BRR1YPR057W IDP3P53982 420 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W MPS1P54199 764 aa9.13□□□□□ -0.95
BRR1YPR057W IRC15Q02733 499 aa9.13□□□□□ -0.95
BRR1YPR057W EFR3Q03653 782 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W ATG10Q07879 167 aa9.13□□□□□ -0.95
BRR1YPR057W NSE1Q07913 336 aa9.13□□□□□ -0.95
BRR1YPR057W YPL245WQ12179 454 aaKnown RBP9.13□□□□□ -0.95
BRR1YPR057W YCL012CQ8J0M4 134 aa9.13□□□□□ -0.95
BRR1YPR057W RPS9AO13516 197 aaKnown RBP9.12□□□□□ -0.95
BRR1YPR057W ARG3P05150 338 aa9.12□□□□□ -0.95
BRR1YPR057W PRT1P06103 763 aaKnown RBP9.12□□□□□ -0.95
BRR1YPR057W YKR104WP0CE69 306 aa9.12□□□□□ -0.95
BRR1YPR057W CLB4P24871 460 aa9.12□□□□□ -0.95
BRR1YPR057W PUP3P25451 205 aaKnown RBP9.12□□□□□ -0.95
BRR1YPR057W PPZ1P26570 692 aa9.12□□□□□ -0.95
BRR1YPR057W GUT1P32190 709 aa9.12□□□□□ -0.95
BRR1YPR057W AAR2P32357 355 aaPredicted RBP9.12□□□□□ -0.95
BRR1YPR057W RIM101P33400 625 aa9.12□□□□□ -0.95
BRR1YPR057W PEX6P33760 1030 aa9.12□□□□□ -0.95
BRR1YPR057W MRP8P35719 219 aa9.12□□□□□ -0.95
BRR1YPR057W YCR087C-AP37263 153 aa9.12□□□□□ -0.95
BRR1YPR057W FAD1P38913 306 aa9.12□□□□□ -0.95
BRR1YPR057W DSS1P39112 969 aa9.12□□□□□ -0.95
BRR1YPR057W ECM10P39987 644 aa9.12□□□□□ -0.95
BRR1YPR057W YJR030CP47101 745 aa9.12□□□□□ -0.95
BRR1YPR057W UPF3P48412 387 aaKnown RBP9.12□□□□□ -0.95
BRR1YPR057W SVL3Q03088 825 aaKnown RBP9.12□□□□□ -0.95
BRR1YPR057W RAD33Q04231 177 aa9.12□□□□□ -0.95
BRR1YPR057W YHC1Q05900 231 aaKnown RBP9.12□□□□□ -0.95
BRR1YPR057W YOL159CQ08300 171 aa9.12□□□□□ -0.95
BRR1YPR057W SRN2Q99176 213 aa9.12□□□□□ -0.95
BRR1YPR057W CET1O13297 549 aaPredicted RBP9.11□□□□□ -0.95
BRR1YPR057W THP2O13539 261 aaKnown RBP9.11□□□□□ -0.95
BRR1YPR057W ARG81P05085 880 aa9.11□□□□□ -0.95
BRR1YPR057W BCY1P07278 416 aaKnown RBP9.11□□□□□ -0.95
BRR1YPR057W FUS1P11710 512 aa9.11□□□□□ -0.95
BRR1YPR057W SGV1P23293 657 aaKnown RBP9.11□□□□□ -0.95
BRR1YPR057W YBR071WP38243 211 aa9.11□□□□□ -0.95
BRR1YPR057W TAE1P38340 232 aa9.11□□□□□ -0.95
BRR1YPR057W GIC1P38785 314 aa9.11□□□□□ -0.95
BRR1YPR057W YHR127WP38833 243 aaKnown RBP9.11□□□□□ -0.95
BRR1YPR057W CCT6P39079 546 aa9.11□□□□□ -0.95
BRR1YPR057W GDH3P39708 457 aa9.11□□□□□ -0.95
BRR1YPR057W GVP36P40531 326 aaKnown RBP9.11□□□□□ -0.95
BRR1YPR057W NBP35P52920 328 aa9.11□□□□□ -0.95
BRR1YPR057W NPY1P53164 384 aa9.11□□□□□ -0.95
BRR1YPR057W AQR1P53943 586 aa9.11□□□□□ -0.95
BRR1YPR057W CLU1Q03690 1277 aaKnown RBP9.11□□□□□ -0.95
BRR1YPR057W ARG7Q04728 441 aa9.11□□□□□ -0.95
BRR1YPR057W YMR034CQ05131 434 aaPredicted RBP9.11□□□□□ -0.95
BRR1YPR057W YDR056CQ12025 205 aa9.11□□□□□ -0.95
BRR1YPR057W ULA1Q12059 462 aa9.11□□□□□ -0.95
BRR1YPR057W YPR011CQ12251 326 aa9.11□□□□□ -0.95
BRR1YPR057W UBR1P19812 1950 aa9.11□□□□□ -0.95
BRR1YPR057W RAS2P01120 322 aaKnown RBP9.1□□□□□ -0.95
BRR1YPR057W RAP1P11938 827 aa9.1□□□□□ -0.95
BRR1YPR057W GBP2P25555 427 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
BRR1YPR057W YKL151CP36059 337 aa9.1□□□□□ -0.95
BRR1YPR057W INM1P38710 295 aa9.1□□□□□ -0.95
BRR1YPR057W FAA2P39518 744 aa9.1□□□□□ -0.95
BRR1YPR057W YEL073CP39974 107 aa9.1□□□□□ -0.95
BRR1YPR057W GIM4P40005 111 aaKnown RBP9.1□□□□□ -0.95
BRR1YPR057W GAB1P41733 394 aa9.1□□□□□ -0.95
BRR1YPR057W SEC26P41810 973 aaKnown RBP9.1□□□□□ -0.95
BRR1YPR057W PFA3P42836 336 aa9.1□□□□□ -0.95
BRR1YPR057W FMP32P43557 207 aa9.1□□□□□ -0.95
BRR1YPR057W ARI1P53111 347 aaKnown RBP9.1□□□□□ -0.95
BRR1YPR057W YNR061CP53747 219 aa9.1□□□□□ -0.95
BRR1YPR057W CAF120P53836 1060 aa9.1□□□□□ -0.95
BRR1YPR057W ASI2P53895 289 aa9.1□□□□□ -0.95
BRR1YPR057W AAT1Q01802 451 aa9.1□□□□□ -0.95
BRR1YPR057W MET31Q03081 177 aa9.1□□□□□ -0.95
BRR1YPR057W TRM8Q12009 286 aa9.1□□□□□ -0.95
BRR1YPR057W VPS68Q12016 184 aa9.1□□□□□ -0.95
BRR1YPR057W DAP1Q12091 152 aa9.1□□□□□ -0.95
BRR1YPR057W RAD59Q12223 238 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms