RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W VTA1Q06263 330 aa2.98□□□□□ -1.93
MRPL40YPL173W YLR112WQ12130 139 aa2.98□□□□□ -1.93
MRPL40YPL173W ISA2Q12425 185 aa2.98□□□□□ -1.93
MRPL40YPL173W RRD2Q12461 358 aa2.98□□□□□ -1.93
MRPL40YPL173W EDE1P34216 1381 aa2.98□□□□□ -1.93
MRPL40YPL173W YML133CQ03099 1374 aa2.98□□□□□ -1.93
MRPL40YPL173W YLL067CQ07888 1374 aa2.98□□□□□ -1.93
MRPL40YPL173W YLL066CQ99208 1374 aa2.98□□□□□ -1.93
MRPL40YPL173W COR1P07256 457 aa2.97□□□□□ -1.93
MRPL40YPL173W RPL3P14126 387 aaKnown RBP2.97□□□□□ -1.93
MRPL40YPL173W PPH22P23595 377 aa2.97□□□□□ -1.93
MRPL40YPL173W CDC60P26637 1090 aaKnown RBP2.97□□□□□ -1.93
MRPL40YPL173W ERV1P27882 189 aa2.97□□□□□ -1.93
MRPL40YPL173W IDH2P28241 369 aaKnown RBP2.97□□□□□ -1.93
MRPL40YPL173W PAP1P29468 568 aaKnown RBP2.97□□□□□ -1.93
MRPL40YPL173W SOL4P53315 255 aa2.97□□□□□ -1.93
MRPL40YPL173W BUD32P53323 261 aa2.97□□□□□ -1.93
MRPL40YPL173W KTR5P53966 522 aaPredicted RBP2.97□□□□□ -1.93
MRPL40YPL173W HEF3P53978 1044 aaKnown RBP2.97□□□□□ -1.93
MRPL40YPL173W YVH1Q02256 364 aaKnown RBP2.97□□□□□ -1.93
MRPL40YPL173W NUP100Q02629 959 aa2.97□□□□□ -1.93
MRPL40YPL173W POS5Q06892 414 aa2.97□□□□□ -1.93
MRPL40YPL173W YDL057WQ07379 328 aa2.97□□□□□ -1.93
MRPL40YPL173W YDL218WQ07629 317 aa2.97□□□□□ -1.93
MRPL40YPL173W FMP45Q07651 309 aa2.97□□□□□ -1.93
MRPL40YPL173W CDC45Q08032 650 aa2.97□□□□□ -1.93
MRPL40YPL173W AFI1Q99222 893 aa2.97□□□□□ -1.93
MRPL40YPL173W RAD52P06778 471 aaKnown RBP2.96□□□□□ -1.94
MRPL40YPL173W AIM17P23180 465 aaKnown RBP2.96□□□□□ -1.94
MRPL40YPL173W SPB1P25582 841 aaPredicted RBP2.96□□□□□ -1.94
MRPL40YPL173W YIM1P28625 365 aa2.96□□□□□ -1.94
MRPL40YPL173W SHP1P34223 423 aa2.96□□□□□ -1.94
MRPL40YPL173W TUL1P36096 758 aa2.96□□□□□ -1.94
MRPL40YPL173W TCM62P38228 572 aaKnown RBP2.96□□□□□ -1.94
MRPL40YPL173W MBB1P39534 108 aa2.96□□□□□ -1.94
MRPL40YPL173W TIF4631P39935 952 aaKnown RBP2.96□□□□□ -1.94
MRPL40YPL173W ALK1P43633 760 aaKnown RBP2.96□□□□□ -1.94
MRPL40YPL173W SNG1P46950 547 aa2.96□□□□□ -1.94
MRPL40YPL173W YPT11P48559 417 aa2.96□□□□□ -1.94
MRPL40YPL173W YGL108CP53139 140 aa2.96□□□□□ -1.94
MRPL40YPL173W KAP120Q02932 1032 aa2.96□□□□□ -1.94
MRPL40YPL173W MCP2Q06567 569 aa2.96□□□□□ -1.94
MRPL40YPL173W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
MRPL40YPL173W SUC2P00724 532 aa2.95□□□□□ -1.94
MRPL40YPL173W MDH1P17505 334 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
MRPL40YPL173W CLC1P17891 233 aa2.95□□□□□ -1.94
MRPL40YPL173W RPB8P20436 146 aa2.95□□□□□ -1.94
MRPL40YPL173W REC107P21651 314 aa2.95□□□□□ -1.94
MRPL40YPL173W CPR2P23285 205 aa2.95□□□□□ -1.94
MRPL40YPL173W SWI3P32591 825 aa2.95□□□□□ -1.94
MRPL40YPL173W YME2P32843 850 aa2.95□□□□□ -1.94
MRPL40YPL173W MSN2P33748 704 aa2.95□□□□□ -1.94
MRPL40YPL173W HCS1P34243 683 aa2.95□□□□□ -1.94
MRPL40YPL173W YKL023WP36103 277 aaKnown RBP2.95□□□□□ -1.94
MRPL40YPL173W PIM1P36775 1133 aa2.95□□□□□ -1.94
MRPL40YPL173W STV1P37296 890 aa2.95□□□□□ -1.94
MRPL40YPL173W ROT2P38138 954 aa2.95□□□□□ -1.94
MRPL40YPL173W DUG2P38149 878 aa2.95□□□□□ -1.94
MRPL40YPL173W LAG1P38703 411 aa2.95□□□□□ -1.94
MRPL40YPL173W APE4P38821 490 aa2.95□□□□□ -1.94
MRPL40YPL173W MET30P39014 640 aa2.95□□□□□ -1.94
MRPL40YPL173W ZIM17P42844 174 aa2.95□□□□□ -1.94
MRPL40YPL173W MNP1P53163 194 aaPredicted RBP2.95□□□□□ -1.94
MRPL40YPL173W ART5P53244 586 aaKnown RBP2.95□□□□□ -1.94
MRPL40YPL173W SMM1P53720 384 aaKnown RBP2.95□□□□□ -1.94
MRPL40YPL173W DUG3P53871 357 aa2.95□□□□□ -1.94
MRPL40YPL173W CIK1Q01649 594 aa2.95□□□□□ -1.94
MRPL40YPL173W YPL014WQ02606 381 aa2.95□□□□□ -1.94
MRPL40YPL173W EKI1Q03764 534 aa2.95□□□□□ -1.94
MRPL40YPL173W SIL1Q08199 421 aa2.95□□□□□ -1.94
MRPL40YPL173W THP1Q08231 455 aa2.95□□□□□ -1.94
MRPL40YPL173W APL5Q08951 932 aaKnown RBP2.95□□□□□ -1.94
MRPL40YPL173W PEP5P12868 1029 aa2.94□□□□□ -1.94
MRPL40YPL173W NAT1P12945 854 aaKnown RBP2.94□□□□□ -1.94
MRPL40YPL173W SUI2P20459 304 aaKnown RBP2.94□□□□□ -1.94
MRPL40YPL173W RRT2P38332 387 aa2.94□□□□□ -1.94
MRPL40YPL173W JEM1P40358 645 aa2.94□□□□□ -1.94
MRPL40YPL173W YIL152WP40455 235 aa2.94□□□□□ -1.94
MRPL40YPL173W FET5P43561 622 aa2.94□□□□□ -1.94
MRPL40YPL173W CAK1P43568 368 aaPredicted RBP2.94□□□□□ -1.94
MRPL40YPL173W MDV1P47025 714 aa2.94□□□□□ -1.94
MRPL40YPL173W VPS25P47142 202 aa2.94□□□□□ -1.94
MRPL40YPL173W YJR154WP47181 346 aa2.94□□□□□ -1.94
MRPL40YPL173W YGR149WP48236 432 aa2.94□□□□□ -1.94
MRPL40YPL173W YGL260WP53056 76 aa2.94□□□□□ -1.94
MRPL40YPL173W VPS9P54787 451 aa2.94□□□□□ -1.94
MRPL40YPL173W RHO4Q00246 291 aa2.94□□□□□ -1.94
MRPL40YPL173W SHR3Q02774 210 aa2.94□□□□□ -1.94
MRPL40YPL173W CTL1Q03220 320 aaKnown RBP2.94□□□□□ -1.94
MRPL40YPL173W IZH1Q03419 316 aa2.94□□□□□ -1.94
MRPL40YPL173W RCF1Q03713 159 aa2.94□□□□□ -1.94
MRPL40YPL173W DON1Q05610 365 aa2.94□□□□□ -1.94
MRPL40YPL173W RDR1Q08904 546 aa2.94□□□□□ -1.94
MRPL40YPL173W PDH1Q12428 516 aaKnown RBP2.94□□□□□ -1.94
MRPL40YPL173W RAV1P47104 1357 aa2.93□□□□□ -1.94
MRPL40YPL173W RPL42AP0CX27 106 aaKnown RBP2.93□□□□□ -1.94
MRPL40YPL173W RPL42BP0CX28 106 aaKnown RBP2.93□□□□□ -1.94
MRPL40YPL173W OPI1P21957 404 aa2.93□□□□□ -1.94
MRPL40YPL173W GID7P25569 745 aa2.93□□□□□ -1.94
MRPL40YPL173W GEX1P25596 615 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms