RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W RRP42Q12277 265 aaPredicted RBP6.45□□□□□ -1.38
LSC1YOR142W RGT2Q12300 763 aa6.45□□□□□ -1.38
LSC1YOR142W SLH1P53327 1967 aaKnown RBP6.45□□□□□ -1.38
LSC1YOR142W NUM1Q00402 2748 aa6.44□□□□□ -1.38
LSC1YOR142W SPT3P06844 337 aa6.44□□□□□ -1.38
LSC1YOR142W YMR085WP0CF18 432 aa6.44□□□□□ -1.38
LSC1YOR142W CMP2P14747 604 aa6.44□□□□□ -1.38
LSC1YOR142W STE4P18851 423 aa6.44□□□□□ -1.38
LSC1YOR142W TYR1P20049 452 aa6.44□□□□□ -1.38
LSC1YOR142W MSB1P21339 1137 aaKnown RBP6.44□□□□□ -1.38
LSC1YOR142W CRM1P30822 1084 aaKnown RBP6.44□□□□□ -1.38
LSC1YOR142W SFC1P33303 322 aa6.44□□□□□ -1.38
LSC1YOR142W SQT1P35184 431 aa6.44□□□□□ -1.38
LSC1YOR142W YHB1P39676 399 aaKnown RBP6.44□□□□□ -1.38
LSC1YOR142W NDE1P40215 560 aa6.44□□□□□ -1.38
LSC1YOR142W SPG5P42933 373 aa6.44□□□□□ -1.38
LSC1YOR142W FAR3P46671 204 aa6.44□□□□□ -1.38
LSC1YOR142W MAD3P47074 515 aa6.44□□□□□ -1.38
LSC1YOR142W MDM34P53083 459 aa6.44□□□□□ -1.38
LSC1YOR142W EFM5P53200 248 aaKnown RBP6.44□□□□□ -1.38
LSC1YOR142W GAS3Q03655 524 aa6.44□□□□□ -1.38
LSC1YOR142W RRP45Q05636 305 aaKnown RBP6.44□□□□□ -1.38
LSC1YOR142W YOR114WQ12219 294 aa6.44□□□□□ -1.38
LSC1YOR142W NCA2Q12374 616 aa6.44□□□□□ -1.38
LSC1YOR142W SPE4Q12455 300 aa6.44□□□□□ -1.38
LSC1YOR142W TY4A-HQ6Q5P6 413 aa6.44□□□□□ -1.38
LSC1YOR142W SRN2Q99176 213 aa6.44□□□□□ -1.38
LSC1YOR142W RHO2P06781 192 aa6.43□□□□□ -1.38
LSC1YOR142W GAL7P08431 366 aa6.43□□□□□ -1.38
LSC1YOR142W RSR1P13856 272 aa6.43□□□□□ -1.38
LSC1YOR142W HOP1P20050 605 aa6.43□□□□□ -1.38
LSC1YOR142W PTP1P25044 335 aa6.43□□□□□ -1.38
LSC1YOR142W AGP1P25376 633 aa6.43□□□□□ -1.38
LSC1YOR142W KIP2P28743 706 aa6.43□□□□□ -1.38
LSC1YOR142W HXT4P32467 576 aa6.43□□□□□ -1.38
LSC1YOR142W PDR3P33200 976 aa6.43□□□□□ -1.38
LSC1YOR142W BCK2P33306 851 aa6.43□□□□□ -1.38
LSC1YOR142W PTH2P34222 208 aa6.43□□□□□ -1.38
LSC1YOR142W YKL100CP34248 587 aa6.43□□□□□ -1.38
LSC1YOR142W RMA1P36001 430 aaKnown RBP6.43□□□□□ -1.38
LSC1YOR142W GGC1P38988 300 aa6.43□□□□□ -1.38
LSC1YOR142W HXT6P39003 570 aaKnown RBP6.43□□□□□ -1.38
LSC1YOR142W HXT7P39004 570 aa6.43□□□□□ -1.38
LSC1YOR142W KXD1P53158 218 aa6.43□□□□□ -1.38
LSC1YOR142W RTS3P53289 263 aa6.43□□□□□ -1.38
LSC1YOR142W LSM3P57743 89 aaKnown RBP6.43□□□□□ -1.38
LSC1YOR142W DIC1Q06143 298 aa6.43□□□□□ -1.38
LSC1YOR142W HDA3Q06623 655 aa6.43□□□□□ -1.38
LSC1YOR142W GPB1Q08886 897 aa6.43□□□□□ -1.38
LSC1YOR142W YPR022CQ12139 1133 aa6.43□□□□□ -1.38
LSC1YOR142W RUD3Q12234 484 aaKnown RBP6.43□□□□□ -1.38
LSC1YOR142W YOL107WQ12239 342 aa6.43□□□□□ -1.38
LSC1YOR142W YPR011CQ12251 326 aa6.43□□□□□ -1.38
LSC1YOR142W HSC82P15108 705 aaKnown RBP6.42□□□□□ -1.38
LSC1YOR142W PRP2P20095 876 aaPredicted RBP6.42□□□□□ -1.38
LSC1YOR142W SEC15P22224 910 aa6.42□□□□□ -1.38
LSC1YOR142W BUB3P26449 341 aa6.42□□□□□ -1.38
LSC1YOR142W HOG1P32485 435 aa6.42□□□□□ -1.38
LSC1YOR142W CBF5P33322 483 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
LSC1YOR142W KKQ8P36004 724 aa6.42□□□□□ -1.38
LSC1YOR142W AXL2P38928 823 aa6.42□□□□□ -1.38
LSC1YOR142W MET30P39014 640 aa6.42□□□□□ -1.38
LSC1YOR142W YER034WP40022 185 aaKnown RBP6.42□□□□□ -1.38
LSC1YOR142W YGL176CP46945 554 aa6.42□□□□□ -1.38
LSC1YOR142W YPT32P51996 222 aaKnown RBP6.42□□□□□ -1.38
LSC1YOR142W TEL2P53038 688 aa6.42□□□□□ -1.38
LSC1YOR142W ESF2P53743 316 aaKnown RBP6.42□□□□□ -1.38
LSC1YOR142W VHS1Q03785 461 aa6.42□□□□□ -1.38
LSC1YOR142W ROY1Q04847 553 aa6.42□□□□□ -1.38
LSC1YOR142W ERF2Q06551 359 aa6.42□□□□□ -1.38
LSC1YOR142W YLR030WQ07967 263 aa6.42□□□□□ -1.38
LSC1YOR142W YOL019WQ08157 551 aa6.42□□□□□ -1.38
LSC1YOR142W AHA1Q12449 350 aaKnown RBP6.42□□□□□ -1.38
LSC1YOR142W RPS21AP0C0V8 87 aaKnown RBP6.41□□□□□ -1.38
LSC1YOR142W NMT1P14743 455 aa6.41□□□□□ -1.38
LSC1YOR142W PRP6P19735 899 aaPredicted RBP6.41□□□□□ -1.38
LSC1YOR142W NTH1P32356 751 aa6.41□□□□□ -1.38
LSC1YOR142W SFA1P32771 386 aa6.41□□□□□ -1.38
LSC1YOR142W LTV1P34078 463 aa6.41□□□□□ -1.38
LSC1YOR142W RRN10P38204 145 aa6.41□□□□□ -1.38
LSC1YOR142W YER158CP40095 573 aa6.41□□□□□ -1.38
LSC1YOR142W FKH2P41813 862 aa6.41□□□□□ -1.38
LSC1YOR142W GCD10P41814 478 aa6.41□□□□□ -1.38
LSC1YOR142W YNL260CP53846 198 aa6.41□□□□□ -1.38
LSC1YOR142W SDH1Q00711 640 aa6.41□□□□□ -1.38
LSC1YOR142W GIP3Q03016 1276 aa6.41□□□□□ -1.38
LSC1YOR142W YML131WQ03102 365 aa6.41□□□□□ -1.38
LSC1YOR142W GUP2Q08929 609 aa6.41□□□□□ -1.38
LSC1YOR142W MHT1Q12525 324 aa6.41□□□□□ -1.38
LSC1YOR142W SEC39Q12745 709 aa6.41□□□□□ -1.38
LSC1YOR142W LEU4P06208 619 aaKnown RBP6.4□□□□□ -1.38
LSC1YOR142W LAT1P12695 482 aaKnown RBP6.4□□□□□ -1.38
LSC1YOR142W ADE1P27616 306 aa6.4□□□□□ -1.38
LSC1YOR142W MLS1P30952 554 aa6.4□□□□□ -1.38
LSC1YOR142W PRO1P32264 428 aa6.4□□□□□ -1.38
LSC1YOR142W UTP9P38882 575 aaKnown RBP6.4□□□□□ -1.38
LSC1YOR142W SEC31P38968 1273 aaKnown RBP6.4□□□□□ -1.38
LSC1YOR142W ARC1P46672 376 aaKnown RBP6.4□□□□□ -1.38
LSC1YOR142W MRS2Q01926 470 aa6.4□□□□□ -1.38
LSC1YOR142W RNT1Q02555 471 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 212.5 ms