RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W COQ9Q05779 260 aa2.64□□□□□ -1.99
PEP12YOR036W VTA1Q06263 330 aa2.64□□□□□ -1.99
PEP12YOR036W FRE3Q08905 711 aa2.64□□□□□ -1.99
PEP12YOR036W NCE102Q12207 173 aaRIP-Chip data2.64□□□□□ -1.99not detected
PEP12YOR036W RRI1Q12468 440 aa2.64□□□□□ -1.99
PEP12YOR036W PEP4P07267 405 aaKnown RBP2.63□□□□□ -1.99
PEP12YOR036W RPL31BP0C2H9 113 aaKnown RBP2.63□□□□□ -1.99
PEP12YOR036W APE1P14904 514 aa2.63□□□□□ -1.99
PEP12YOR036W PRP2P20095 876 aaPredicted RBP2.63□□□□□ -1.99
PEP12YOR036W REC107P21651 314 aa2.63□□□□□ -1.99
PEP12YOR036W CLB1P24868 471 aa2.63□□□□□ -1.99
PEP12YOR036W HXT3P32466 567 aaKnown RBP2.63□□□□□ -1.99
PEP12YOR036W YME1P32795 747 aa2.63□□□□□ -1.99
PEP12YOR036W RFC1P38630 861 aaKnown RBP2.63□□□□□ -1.99
PEP12YOR036W LEU5P38702 357 aa2.63□□□□□ -1.99
PEP12YOR036W PHO90P39535 881 aa2.63□□□□□ -1.99
PEP12YOR036W HXT9P40885 567 aa2.63□□□□□ -1.99
PEP12YOR036W SLG1P54867 378 aa2.63□□□□□ -1.99
PEP12YOR036W CIK1Q01649 594 aa2.63□□□□□ -1.99
PEP12YOR036W TOF2Q02208 771 aa2.63□□□□□ -1.99
PEP12YOR036W YMR160WQ03823 816 aa2.63□□□□□ -1.99
PEP12YOR036W ARX1Q03862 593 aaKnown RBP2.63□□□□□ -1.99
PEP12YOR036W PDS5Q04264 1277 aa2.63□□□□□ -1.99
PEP12YOR036W ARP10Q04549 284 aa2.63□□□□□ -1.99
PEP12YOR036W SOV1Q04748 898 aa2.63□□□□□ -1.99
PEP12YOR036W ECM30Q06673 1274 aa2.63□□□□□ -1.99
PEP12YOR036W CDC45Q08032 650 aa2.63□□□□□ -1.99
PEP12YOR036W GSH2Q08220 491 aa2.63□□□□□ -1.99
PEP12YOR036W ISA2Q12425 185 aa2.63□□□□□ -1.99
PEP12YOR036W SUI2P20459 304 aaKnown RBP2.62□□□□□ -1.99
PEP12YOR036W PAP1P29468 568 aaKnown RBP2.62□□□□□ -1.99
PEP12YOR036W SWI3P32591 825 aa2.62□□□□□ -1.99
PEP12YOR036W PIM1P36775 1133 aa2.62□□□□□ -1.99
PEP12YOR036W APE4P38821 490 aa2.62□□□□□ -1.99
PEP12YOR036W YHR210CP38893 341 aa2.62□□□□□ -1.99
PEP12YOR036W DHH1P39517 506 aaKnown RBP2.62□□□□□ -1.99
PEP12YOR036W ALK1P43633 760 aaKnown RBP2.62□□□□□ -1.99
PEP12YOR036W TCB2P48231 1178 aa2.62□□□□□ -1.99
PEP12YOR036W YGR126WP53274 230 aa2.62□□□□□ -1.99
PEP12YOR036W KAP120Q02932 1032 aa2.62□□□□□ -1.99
PEP12YOR036W ROY1Q04847 553 aa2.62□□□□□ -1.99
PEP12YOR036W YOR365CQ08844 703 aa2.62□□□□□ -1.99
PEP12YOR036W YML133CQ03099 1374 aa2.61□□□□□ -1.99
PEP12YOR036W YLL067CQ07888 1374 aa2.61□□□□□ -1.99
PEP12YOR036W YLL066CQ99208 1374 aa2.61□□□□□ -1.99
PEP12YOR036W SNF3P10870 884 aa2.61□□□□□ -1.99
PEP12YOR036W CPR2P23285 205 aa2.61□□□□□ -1.99
PEP12YOR036W CDC60P26637 1090 aaKnown RBP2.61□□□□□ -1.99
PEP12YOR036W IDH2P28241 369 aaKnown RBP2.61□□□□□ -1.99
PEP12YOR036W RML2P32611 393 aa2.61□□□□□ -1.99
PEP12YOR036W HCS1P34243 683 aa2.61□□□□□ -1.99
PEP12YOR036W JEM1P40358 645 aa2.61□□□□□ -1.99
PEP12YOR036W YIL060WP40519 144 aa2.61□□□□□ -1.99
PEP12YOR036W CAK1P43568 368 aaPredicted RBP2.61□□□□□ -1.99
PEP12YOR036W ATG27P46989 271 aa2.61□□□□□ -1.99
PEP12YOR036W PKP2P53170 491 aa2.61□□□□□ -1.99
PEP12YOR036W DRN1P53255 507 aaKnown RBP2.61□□□□□ -1.99
PEP12YOR036W SOL4P53315 255 aa2.61□□□□□ -1.99
PEP12YOR036W HEF3P53978 1044 aaKnown RBP2.61□□□□□ -1.99
PEP12YOR036W YVH1Q02256 364 aaKnown RBP2.61□□□□□ -1.99
PEP12YOR036W CTL1Q03220 320 aaKnown RBP2.61□□□□□ -1.99
PEP12YOR036W SMA2Q04658 369 aa2.61□□□□□ -1.99
PEP12YOR036W AIM32Q04689 311 aa2.61□□□□□ -1.99
PEP12YOR036W MCP2Q06567 569 aa2.61□□□□□ -1.99
PEP12YOR036W EDE1P34216 1381 aa2.61□□□□□ -1.99
PEP12YOR036W COR1P07256 457 aa2.6□□□□□ -1.99
PEP12YOR036W RPL3P14126 387 aaKnown RBP2.6□□□□□ -1.99
PEP12YOR036W MDH1P17505 334 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
PEP12YOR036W RPB8P20436 146 aa2.6□□□□□ -1.99
PEP12YOR036W SPB1P25582 841 aaPredicted RBP2.6□□□□□ -1.99
PEP12YOR036W YME2P32843 850 aa2.6□□□□□ -1.99
PEP12YOR036W SHP1P34223 423 aa2.6□□□□□ -1.99
PEP12YOR036W TUL1P36096 758 aa2.6□□□□□ -1.99
PEP12YOR036W YKL023WP36103 277 aaKnown RBP2.6□□□□□ -1.99
PEP12YOR036W STV1P37296 890 aa2.6□□□□□ -1.99
PEP12YOR036W LAG1P38703 411 aa2.6□□□□□ -1.99
PEP12YOR036W MBB1P39534 108 aa2.6□□□□□ -1.99
PEP12YOR036W TIF4631P39935 952 aaKnown RBP2.6□□□□□ -1.99
PEP12YOR036W BUD27P43573 796 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
PEP12YOR036W SNG1P46950 547 aa2.6□□□□□ -1.99
PEP12YOR036W YJR154WP47181 346 aa2.6□□□□□ -1.99
PEP12YOR036W YGL108CP53139 140 aa2.6□□□□□ -1.99
PEP12YOR036W MNP1P53163 194 aaPredicted RBP2.6□□□□□ -1.99
PEP12YOR036W CAF130P53280 1122 aaPredicted RBP2.6□□□□□ -1.99
PEP12YOR036W OGG1P53397 376 aaPredicted RBP2.6□□□□□ -1.99
PEP12YOR036W DON1Q05610 365 aa2.6□□□□□ -1.99
PEP12YOR036W POS5Q06892 414 aa2.6□□□□□ -1.99
PEP12YOR036W YDL218WQ07629 317 aa2.6□□□□□ -1.99
PEP12YOR036W FMP45Q07651 309 aa2.6□□□□□ -1.99
PEP12YOR036W AFI1Q99222 893 aa2.6□□□□□ -1.99
PEP12YOR036W SPS4P09937 338 aa2.59□□□□□ -1.99
PEP12YOR036W PEP5P12868 1029 aa2.59□□□□□ -1.99
PEP12YOR036W OPI1P21957 404 aa2.59□□□□□ -1.99
PEP12YOR036W SGV1P23293 657 aaKnown RBP2.59□□□□□ -1.99
PEP12YOR036W PPH22P23595 377 aa2.59□□□□□ -1.99
PEP12YOR036W ERV1P27882 189 aa2.59□□□□□ -1.99
PEP12YOR036W RAD14P28519 371 aa2.59□□□□□ -1.99
PEP12YOR036W YIM1P28625 365 aa2.59□□□□□ -1.99
PEP12YOR036W SNC1P31109 117 aa2.59□□□□□ -1.99
PEP12YOR036W APE3P37302 537 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms