RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C PLB1P39105 664 aa9.3□□□□□ -0.92
SPT20YOL148C ALR2P43553 858 aa9.3□□□□□ -0.92
SPT20YOL148C LYS4P49367 693 aaPredicted RBP9.3□□□□□ -0.92
SPT20YOL148C ROM1P53046 1155 aa9.3□□□□□ -0.92
SPT20YOL148C MRH4P53166 561 aa9.3□□□□□ -0.92
SPT20YOL148C DAM1P53267 343 aa9.3□□□□□ -0.92
SPT20YOL148C EFR3Q03653 782 aaKnown RBP9.3□□□□□ -0.92
SPT20YOL148C GAS3Q03655 524 aa9.3□□□□□ -0.92
SPT20YOL148C ARX1Q03862 593 aaKnown RBP9.3□□□□□ -0.92
SPT20YOL148C SYT1Q06836 1226 aa9.3□□□□□ -0.92
SPT20YOL148C PEX27Q08580 376 aa9.3□□□□□ -0.92
SPT20YOL148C DSF1P0CX08 502 aa9.29□□□□□ -0.92
SPT20YOL148C YNR073CP0CX09 502 aa9.29□□□□□ -0.92
SPT20YOL148C ASP3-2P0CX77 362 aa9.29□□□□□ -0.92
SPT20YOL148C ASP3-3P0CX78 362 aa9.29□□□□□ -0.92
SPT20YOL148C ASP3-4P0CX79 362 aa9.29□□□□□ -0.92
SPT20YOL148C ASP3-1P0CZ17 362 aa9.29□□□□□ -0.92
SPT20YOL148C RPB4P20433 221 aaPredicted RBP9.29□□□□□ -0.92
SPT20YOL148C EMC1P25574 760 aa9.29□□□□□ -0.92
SPT20YOL148C VRP1P37370 817 aa9.29□□□□□ -0.92
SPT20YOL148C ECM31P38122 312 aa9.29□□□□□ -0.92
SPT20YOL148C SEA4P38164 1038 aa9.29□□□□□ -0.92
SPT20YOL148C MMS4P38257 691 aa9.29□□□□□ -0.92
SPT20YOL148C HSL7P38274 827 aa9.29□□□□□ -0.92
SPT20YOL148C BIT2P38346 545 aa9.29□□□□□ -0.92
SPT20YOL148C FSH1P38777 243 aaKnown RBP9.29□□□□□ -0.92
SPT20YOL148C PPE1P38796 400 aa9.29□□□□□ -0.92
SPT20YOL148C YHR131CP38835 850 aa9.29□□□□□ -0.92
SPT20YOL148C XDJ1P39102 459 aa9.29□□□□□ -0.92
SPT20YOL148C YGR168CP53293 376 aa9.29□□□□□ -0.92
SPT20YOL148C YAT1P80235 687 aa9.29□□□□□ -0.92
SPT20YOL148C PEX13P80667 386 aa9.29□□□□□ -0.92
SPT20YOL148C HEL2Q05580 639 aaKnown RBP9.29□□□□□ -0.92
SPT20YOL148C PDR8Q06149 701 aa9.29□□□□□ -0.92
SPT20YOL148C DIS3Q08162 1001 aaKnown RBP9.29□□□□□ -0.92
SPT20YOL148C TFB4Q12004 338 aa9.29□□□□□ -0.92
SPT20YOL148C MAM3Q12296 706 aa9.29□□□□□ -0.92
SPT20YOL148C EFG1Q3E705 233 aaKnown RBP9.29□□□□□ -0.92
SPT20YOL148C YHR213W-AQ8TGT4 77 aa9.29□□□□□ -0.92
SPT20YOL148C TRX2P22803 104 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C CDC5P32562 705 aa9.28□□□□□ -0.92
SPT20YOL148C COX13P32799 129 aa9.28□□□□□ -0.92
SPT20YOL148C SEC61P32915 480 aa9.28□□□□□ -0.92
SPT20YOL148C STE5P32917 917 aa9.28□□□□□ -0.92
SPT20YOL148C JEN1P36035 616 aa9.28□□□□□ -0.92
SPT20YOL148C FTH1P38310 465 aa9.28□□□□□ -0.92
SPT20YOL148C YHR045WP38775 560 aa9.28□□□□□ -0.92
SPT20YOL148C DUN1P39009 513 aa9.28□□□□□ -0.92
SPT20YOL148C EAF5P39995 279 aa9.28□□□□□ -0.92
SPT20YOL148C PCL6P40038 420 aa9.28□□□□□ -0.92
SPT20YOL148C MAF1P41910 395 aa9.28□□□□□ -0.92
SPT20YOL148C LSM1P47017 172 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C NSE5Q03718 556 aa9.28□□□□□ -0.92
SPT20YOL148C EMI2Q04409 500 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C HEM2P05373 342 aa9.28□□□□□ -0.92
SPT20YOL148C GLN4P13188 809 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C NCP1P16603 691 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C RHB1P25378 209 aa9.28□□□□□ -0.92
SPT20YOL148C TGL1P34163 548 aa9.28□□□□□ -0.92
SPT20YOL148C ATP3P38077 311 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C VID24P38263 362 aa9.28□□□□□ -0.92
SPT20YOL148C RPS12P48589 143 aaKnown RBP9.28□□□□□ -0.92
SPT20YOL148C NOP13P53883 403 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
SPT20YOL148C YPL071CQ02864 156 aa9.28□□□□□ -0.92
SPT20YOL148C INA17Q02888 182 aa9.28□□□□□ -0.92
SPT20YOL148C SCS7Q03529 384 aa9.28□□□□□ -0.92
SPT20YOL148C CRN1Q06440 651 aa9.28□□□□□ -0.92
SPT20YOL148C MDM12Q92328 271 aa9.28□□□□□ -0.92
SPT20YOL148C SAM1P10659 382 aaKnown RBP9.27□□□□□ -0.93
SPT20YOL148C DAP2P18962 818 aa9.27□□□□□ -0.93
SPT20YOL148C MRPL33P20084 86 aa9.27□□□□□ -0.93
SPT20YOL148C VBA3P25594 458 aa9.27□□□□□ -0.93
SPT20YOL148C CAM1P29547 415 aaKnown RBP9.27□□□□□ -0.93
SPT20YOL148C KAP122P32767 1081 aa9.27□□□□□ -0.93
SPT20YOL148C HIS7P33734 552 aaKnown RBP9.27□□□□□ -0.93
SPT20YOL148C ZRT3P34240 503 aa9.27□□□□□ -0.93
SPT20YOL148C VBA5P36172 582 aa9.27□□□□□ -0.93
SPT20YOL148C ABZ1P37254 787 aaPredicted RBP9.27□□□□□ -0.93
SPT20YOL148C YBR056WP38081 501 aa9.27□□□□□ -0.93
SPT20YOL148C HMF1P40037 129 aaKnown RBP9.27□□□□□ -0.93
SPT20YOL148C SOK1P40317 901 aa9.27□□□□□ -0.93
SPT20YOL148C SSY5P47002 699 aa9.27□□□□□ -0.93
SPT20YOL148C YNR021WP53723 404 aaKnown RBP9.27□□□□□ -0.93
SPT20YOL148C CAF40P53829 373 aa9.27□□□□□ -0.93
SPT20YOL148C ARP4P80428 489 aa9.27□□□□□ -0.93
SPT20YOL148C REG1Q00816 1014 aa9.27□□□□□ -0.93
SPT20YOL148C RCO1Q04779 684 aa9.27□□□□□ -0.93
SPT20YOL148C YLR345WQ06137 509 aa9.27□□□□□ -0.93
SPT20YOL148C ARO10Q06408 635 aa9.27□□□□□ -0.93
SPT20YOL148C BUD20Q08004 166 aaPredicted RBP9.27□□□□□ -0.93
SPT20YOL148C YOR022CQ12204 715 aa9.27□□□□□ -0.93
SPT20YOL148C PNS1Q12412 539 aa9.27□□□□□ -0.93
SPT20YOL148C RPS9AO13516 197 aaKnown RBP9.26□□□□□ -0.93
SPT20YOL148C PRC1P00729 532 aa9.26□□□□□ -0.93
SPT20YOL148C MSS1P32559 526 aaPredicted RBP9.26□□□□□ -0.93
SPT20YOL148C RTG2P32608 588 aaKnown RBP9.26□□□□□ -0.93
SPT20YOL148C NMD3P38861 518 aaKnown RBP9.26□□□□□ -0.93
SPT20YOL148C MNN1P39106 762 aa9.26□□□□□ -0.93
SPT20YOL148C GEM1P39722 662 aa9.26□□□□□ -0.93
SPT20YOL148C ALT1P52893 592 aa9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms