RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W PLB3Q08108 686 aa6.01□□□□□ -1.45
CAF40YNL288W TRM8Q12009 286 aa6.01□□□□□ -1.45
CAF40YNL288W NCA2Q12374 616 aa6.01□□□□□ -1.45
CAF40YNL288W YMR030W-AQ3E760 96 aa6.01□□□□□ -1.45
CAF40YNL288W DFG16Q99234 619 aa6.01□□□□□ -1.45
CAF40YNL288W SEC53P07283 254 aaKnown RBP6□□□□□ -1.45
CAF40YNL288W YSR3P23501 404 aa6□□□□□ -1.45
CAF40YNL288W CIN8P27895 1000 aa6□□□□□ -1.45
CAF40YNL288W SPR1P32603 445 aa6□□□□□ -1.45
CAF40YNL288W LRG1P35688 1017 aa6□□□□□ -1.45
CAF40YNL288W MUP3P38734 546 aa6□□□□□ -1.45
CAF40YNL288W LIN1P38852 340 aaPredicted RBP6□□□□□ -1.45
CAF40YNL288W ECL1P48235 211 aa6□□□□□ -1.45
CAF40YNL288W IST1P53843 298 aaPredicted RBP6□□□□□ -1.45
CAF40YNL288W TRM82Q03774 444 aa6□□□□□ -1.45
CAF40YNL288W SFH1Q06168 426 aa6□□□□□ -1.45
CAF40YNL288W RTT10Q08924 1013 aa6□□□□□ -1.45
CAF40YNL288W MRH1Q12117 320 aaPredicted RBP6□□□□□ -1.45
CAF40YNL288W TOR2P32600 2474 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W TUB1P09733 447 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W RSR1P13856 272 aa5.99□□□□□ -1.45
CAF40YNL288W SAM35P14693 329 aa5.99□□□□□ -1.45
CAF40YNL288W SCL1P21243 252 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W ERG6P25087 383 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W SFP1P32432 683 aa5.99□□□□□ -1.45
CAF40YNL288W YKL100CP34248 587 aa5.99□□□□□ -1.45
CAF40YNL288W THI80P35202 319 aa5.99□□□□□ -1.45
CAF40YNL288W YHR020WP38708 688 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W EFM1P38732 585 aa5.99□□□□□ -1.45
CAF40YNL288W YHR045WP38775 560 aa5.99□□□□□ -1.45
CAF40YNL288W YIL108WP40483 696 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W IRC24P40580 263 aa5.99□□□□□ -1.45
CAF40YNL288W ARC1P46672 376 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W CTK3P46963 296 aaPredicted RBP5.99□□□□□ -1.45
CAF40YNL288W SWS2P53937 143 aa5.99□□□□□ -1.45
CAF40YNL288W SPO20Q04359 397 aa5.99□□□□□ -1.45
CAF40YNL288W SSL1Q04673 461 aaPredicted RBP5.99□□□□□ -1.45
CAF40YNL288W CRN1Q06440 651 aa5.99□□□□□ -1.45
CAF40YNL288W RSC3Q06639 885 aa5.99□□□□□ -1.45
CAF40YNL288W YFT2Q06676 274 aa5.99□□□□□ -1.45
CAF40YNL288W CHS5Q12114 671 aaKnown RBP5.99□□□□□ -1.45
CAF40YNL288W UBX3Q12229 455 aa5.99□□□□□ -1.45
CAF40YNL288W MDY2Q12285 212 aa5.99□□□□□ -1.45
CAF40YNL288W SPE4Q12455 300 aa5.99□□□□□ -1.45
CAF40YNL288W MDM35O60200 86 aa5.98□□□□□ -1.45
CAF40YNL288W HEM2P05373 342 aa5.98□□□□□ -1.45
CAF40YNL288W YAR066WP0CX18 203 aa5.98□□□□□ -1.45
CAF40YNL288W YHR214WP0CX19 203 aa5.98□□□□□ -1.45
CAF40YNL288W VPS34P22543 875 aa5.98□□□□□ -1.45
CAF40YNL288W YCR090CP25654 182 aaKnown RBP5.98□□□□□ -1.45
CAF40YNL288W MKK2P32491 506 aa5.98□□□□□ -1.45
CAF40YNL288W YSC84P32793 468 aa5.98□□□□□ -1.45
CAF40YNL288W PHO89P38361 574 aa5.98□□□□□ -1.45
CAF40YNL288W MPT5P39016 859 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
CAF40YNL288W YEL073CP39974 107 aa5.98□□□□□ -1.45
CAF40YNL288W GIM4P40005 111 aaKnown RBP5.98□□□□□ -1.45
CAF40YNL288W LSM5P40089 93 aaKnown RBP5.98□□□□□ -1.45
CAF40YNL288W UTP18P40362 594 aaPredicted RBP5.98□□□□□ -1.45
CAF40YNL288W AXL1P40851 1208 aa5.98□□□□□ -1.45
CAF40YNL288W TEL2P53038 688 aa5.98□□□□□ -1.45
CAF40YNL288W CLD1P53264 445 aa5.98□□□□□ -1.45
CAF40YNL288W GOT1Q03554 138 aa5.98□□□□□ -1.45
CAF40YNL288W CSN9Q03981 162 aa5.98□□□□□ -1.45
CAF40YNL288W BCH1Q05029 724 aa5.98□□□□□ -1.45
CAF40YNL288W THI73Q07904 523 aa5.98□□□□□ -1.45
CAF40YNL288W BEM2P39960 2167 aaKnown RBP5.98□□□□□ -1.45
CAF40YNL288W NMT1P14743 455 aa5.97□□□□□ -1.45
CAF40YNL288W MET8P15807 274 aa5.97□□□□□ -1.45
CAF40YNL288W CLB1P24868 471 aa5.97□□□□□ -1.45
CAF40YNL288W AAD3P25612 363 aa5.97□□□□□ -1.45
CAF40YNL288W ATP11P32453 318 aa5.97□□□□□ -1.45
CAF40YNL288W PTM1P32857 523 aa5.97□□□□□ -1.45
CAF40YNL288W ASK1P35734 292 aa5.97□□□□□ -1.45
CAF40YNL288W MRPL37P36532 105 aa5.97□□□□□ -1.45
CAF40YNL288W RIM2P38127 377 aa5.97□□□□□ -1.45
CAF40YNL288W YBR032WP38223 100 aa5.97□□□□□ -1.45
CAF40YNL288W SPF1P39986 1215 aaKnown RBP5.97□□□□□ -1.45
CAF40YNL288W GAT1P43574 510 aa5.97□□□□□ -1.45
CAF40YNL288W FAR3P46671 204 aa5.97□□□□□ -1.45
CAF40YNL288W PAN2P53010 1115 aaPredicted RBP5.97□□□□□ -1.45
CAF40YNL288W SHY1P53266 389 aa5.97□□□□□ -1.45
CAF40YNL288W TAF12Q03761 539 aa5.97□□□□□ -1.45
CAF40YNL288W SEC10Q06245 871 aa5.97□□□□□ -1.45
CAF40YNL288W YOL019WQ08157 551 aa5.97□□□□□ -1.45
CAF40YNL288W PHO5P00635 467 aa5.96□□□□□ -1.46
CAF40YNL288W SYP1P25623 870 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W SKT5P34226 696 aa5.96□□□□□ -1.46
CAF40YNL288W GIC1P38785 314 aa5.96□□□□□ -1.46
CAF40YNL288W UBA4P38820 440 aa5.96□□□□□ -1.46
CAF40YNL288W DHH1P39517 506 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W ELO1P39540 310 aa5.96□□□□□ -1.46
CAF40YNL288W YHB1P39676 399 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W YER034WP40022 185 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W PFK26P40433 827 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W GNP1P48813 663 aa5.96□□□□□ -1.46
CAF40YNL288W AIF1P52923 378 aa5.96□□□□□ -1.46
CAF40YNL288W EFM5P53200 248 aaKnown RBP5.96□□□□□ -1.46
CAF40YNL288W IBD2P53892 351 aa5.96□□□□□ -1.46
CAF40YNL288W HXT15P54854 567 aa5.96□□□□□ -1.46
CAF40YNL288W RMI1Q02685 241 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 47.4 ms