RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YDR239CQ03780 787 aa3.94□□□□□ -1.78
PUB1YNL016W PPM1Q04081 328 aa3.94□□□□□ -1.78
PUB1YNL016W STP3Q05937 343 aa3.94□□□□□ -1.78
PUB1YNL016W FMP27Q06179 2628 aa3.94□□□□□ -1.78
PUB1YNL016W HBT1Q07653 1046 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W POM34Q12445 299 aa3.94□□□□□ -1.78
PUB1YNL016W ADF1Q2V2Q1 113 aa3.94□□□□□ -1.78
PUB1YNL016W PNO1Q99216 274 aaKnown RBP3.94□□□□□ -1.78
PUB1YNL016W PDR18P53756 1333 aa3.93□□□□□ -1.78
PUB1YNL016W YLR415CO13578 112 aa3.93□□□□□ -1.78
PUB1YNL016W YBR085C-AO43137 85 aa3.93□□□□□ -1.78
PUB1YNL016W CYC7P00045 113 aa3.93□□□□□ -1.78
PUB1YNL016W CBP2P03874 630 aaPredicted RBP3.93□□□□□ -1.78
PUB1YNL016W GAL80P04387 435 aa3.93□□□□□ -1.78
PUB1YNL016W ARD1P07347 238 aaPredicted RBP3.93□□□□□ -1.78
PUB1YNL016W SPE1P08432 466 aa3.93□□□□□ -1.78
PUB1YNL016W SEC12P11655 471 aa3.93□□□□□ -1.78
PUB1YNL016W PRP4P20053 465 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W VPS33P20795 691 aa3.93□□□□□ -1.78
PUB1YNL016W RNR1P21524 888 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W DMC1P25453 334 aa3.93□□□□□ -1.78
PUB1YNL016W LRE1P25579 583 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W YCR061WP25639 631 aa3.93□□□□□ -1.78
PUB1YNL016W FUB1P25659 250 aa3.93□□□□□ -1.78
PUB1YNL016W PPZ1P26570 692 aa3.93□□□□□ -1.78
PUB1YNL016W APL1P27351 700 aa3.93□□□□□ -1.78
PUB1YNL016W NTH1P32356 751 aa3.93□□□□□ -1.78
PUB1YNL016W STE14P32584 239 aa3.93□□□□□ -1.78
PUB1YNL016W ARC19P33204 171 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W TCD2P36101 447 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W APT2P36973 181 aa3.93□□□□□ -1.78
PUB1YNL016W AGP2P38090 596 aa3.93□□□□□ -1.78
PUB1YNL016W PEX32P38292 413 aa3.93□□□□□ -1.78
PUB1YNL016W YBR259WP38338 688 aa3.93□□□□□ -1.78
PUB1YNL016W MLH1P38920 769 aa3.93□□□□□ -1.78
PUB1YNL016W YTA12P40341 825 aa3.93□□□□□ -1.78
PUB1YNL016W LRO1P40345 661 aa3.93□□□□□ -1.78
PUB1YNL016W PIB2P53191 635 aa3.93□□□□□ -1.78
PUB1YNL016W LSC1P53598 329 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W AQR1P53943 586 aa3.93□□□□□ -1.78
PUB1YNL016W ABZ2Q03266 374 aa3.93□□□□□ -1.78
PUB1YNL016W RPN9Q04062 393 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W ATG23Q06671 453 aa3.93□□□□□ -1.78
PUB1YNL016W GSH2Q08220 491 aa3.93□□□□□ -1.78
PUB1YNL016W CLP1Q08685 445 aaPredicted RBP3.93□□□□□ -1.78
PUB1YNL016W TRE1Q08919 783 aa3.93□□□□□ -1.78
PUB1YNL016W YVC1Q12324 675 aa3.93□□□□□ -1.78
PUB1YNL016W TY1A-NL1Q12391 440 aaKnown RBP3.93□□□□□ -1.78
PUB1YNL016W GAL7P08431 366 aa3.92□□□□□ -1.78
PUB1YNL016W GCD2P12754 651 aaPredicted RBP3.92□□□□□ -1.78
PUB1YNL016W KIN2P13186 1147 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W IDH2P28241 369 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W FAA1P30624 700 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W HMX1P32339 317 aa3.92□□□□□ -1.78
PUB1YNL016W MRP4P32902 394 aa3.92□□□□□ -1.78
PUB1YNL016W RPT5P33297 434 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W YKT6P36015 200 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W MRPL4P36517 319 aa3.92□□□□□ -1.78
PUB1YNL016W RFC3P38629 340 aa3.92□□□□□ -1.78
PUB1YNL016W PEX18P38855 283 aa3.92□□□□□ -1.78
PUB1YNL016W GIP4P39732 760 aa3.92□□□□□ -1.78
PUB1YNL016W INA22P40576 216 aa3.92□□□□□ -1.78
PUB1YNL016W OPT1P40897 799 aa3.92□□□□□ -1.78
PUB1YNL016W GCN20P43535 752 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W IDS2P46958 469 aa3.92□□□□□ -1.78
PUB1YNL016W LIA1P47120 325 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W LIF1P53150 421 aa3.92□□□□□ -1.78
PUB1YNL016W COX18P53239 316 aa3.92□□□□□ -1.78
PUB1YNL016W YNL143CP53908 130 aa3.92□□□□□ -1.78
PUB1YNL016W PNG1Q02890 363 aa3.92□□□□□ -1.78
PUB1YNL016W FIN1Q03898 291 aa3.92□□□□□ -1.78
PUB1YNL016W RPC11Q04307 110 aaPredicted RBP3.92□□□□□ -1.78
PUB1YNL016W BUD22Q04347 519 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W MRPL1Q04599 285 aa3.92□□□□□ -1.78
PUB1YNL016W ARR3Q06598 404 aa3.92□□□□□ -1.78
PUB1YNL016W YFH1Q07540 174 aa3.92□□□□□ -1.78
PUB1YNL016W GPN2Q08726 347 aaPredicted RBP3.92□□□□□ -1.78
PUB1YNL016W ULA1Q12059 462 aa3.92□□□□□ -1.78
PUB1YNL016W PRS5Q12265 496 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W ECM3Q99252 613 aa3.92□□□□□ -1.78
PUB1YNL016W HRP1Q99383 534 aaKnown RBP3.92□□□□□ -1.78
PUB1YNL016W TDH1P00360 332 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W TUB3P09734 445 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W RPL3P14126 387 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W PRP6P19735 899 aaPredicted RBP3.91□□□□□ -1.78
PUB1YNL016W VPS34P22543 875 aa3.91□□□□□ -1.78
PUB1YNL016W MBR1P23493 339 aa3.91□□□□□ -1.78
PUB1YNL016W SSE2P32590 693 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W HCS1P34243 683 aa3.91□□□□□ -1.78
PUB1YNL016W NTC20P38302 140 aaPredicted RBP3.91□□□□□ -1.78
PUB1YNL016W OSH3P38713 996 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W SEC31P38968 1273 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W YJL193WP39542 402 aa3.91□□□□□ -1.78
PUB1YNL016W YER034WP40022 185 aaKnown RBP3.91□□□□□ -1.78
PUB1YNL016W SER3P40054 469 aa3.91□□□□□ -1.78
PUB1YNL016W GET2P40056 285 aa3.91□□□□□ -1.78
PUB1YNL016W URM1P40554 99 aaPredicted RBP3.91□□□□□ -1.78
PUB1YNL016W GTS1P40956 396 aa3.91□□□□□ -1.78
PUB1YNL016W MAF1P41910 395 aa3.91□□□□□ -1.78
PUB1YNL016W ECM27P47144 725 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms