RNA–Protein interactions for RNA: YNL012W

SPO1, Transcript of Meiosis-specific prospore protein, yeast

Gene SPO1, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO1	YNL012W	ARO3	P14843	370 aa	Known RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	NUP1	P20676	1076 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	SPB1	P25582	841 aa	Predicted RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	GEX1	P25596	615 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	PTC6	P25646	442 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	YBL055C	P34220	418 aa	Predicted RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	HCS1	P34243	683 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	ARP1	P38696	384 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	YHR218W	P38899	603 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	CDC1	P40986	491 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	MNP1	P53163	194 aa	Predicted RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	PDR16	P53860	351 aa	Known RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	PHO84	P25297	587 aa	Known RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	SOF1	P33750	489 aa	Known RBP	4.22	□□□□□ -1.73
SPO1	YNL012W	MSR1	P38714	643 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	MLH1	P38920	769 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	YJL107C	P42947	387 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	AIM22	P47051	409 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	SPH1	Q06160	661 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	VPS54	Q12071	889 aa		4.22	□□□□□ -1.73
SPO1	YNL012W	CLC1	P17891	233 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	MDM10	P18409	493 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	DBP3	P20447	523 aa	Known RBP	4.21	□□□□□ -1.74
SPO1	YNL012W	PIM1	P36775	1133 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	RTT105	P40063	208 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	PKP1	P40530	394 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	NMD5	P46970	1048 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	CAF130	P53280	1122 aa	Predicted RBP	4.21	□□□□□ -1.74
SPO1	YNL012W	NOP6	Q07623	225 aa	Known RBP	4.21	□□□□□ -1.74
SPO1	YNL012W	RRD2	Q12461	358 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	DNF1	P32660	1571 aa		4.21	□□□□□ -1.74
SPO1	YNL012W	PGK1	P00560	416 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	CRM1	P30822	1084 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	AFG1	P32317	509 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	YME1	P32795	747 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	RIB7	P33312	244 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	TSC10	P38342	320 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	YMR147W	P40218	223 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	CHS6	P40955	746 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	FAR3	P46671	204 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	YJL132W	P47014	750 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	YGR149W	P48236	432 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	BPL1	P48445	690 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	IST1	P53843	298 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	RSC9	Q03124	581 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	TEN1	Q07921	160 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	LEA1	Q08963	238 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	NCE102	Q12207	173 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
SPO1	YNL012W	UBX3	Q12229	455 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	ILV2	P07342	687 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	RPL31B	P0C2H9	113 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	YMR085W	P0CF18	432 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	SUI2	P20459	304 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	LHS1	P36016	881 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	APD1	P38281	316 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	ANS1	P38832	159 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	SLG1	P54867	378 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SPO1	YNL012W	ADA2	Q02336	434 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	SNU56	Q03782	492 aa	Known RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	RIM13	Q03792	727 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	TPO3	Q06451	622 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	APL4	Q12028	832 aa		4.2	□□□□□ -1.74
SPO1	YNL012W	CFT2	Q12102	859 aa	Predicted RBP	4.2	□□□□□ -1.74
SPO1	YNL012W	GAL4	P04386	881 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	PFF1	P38244	976 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	TIF4631	P39935	952 aa	Known RBP	4.19	□□□□□ -1.74
SPO1	YNL012W	COS5	P47187	383 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	DRN1	P53255	507 aa	Known RBP	4.19	□□□□□ -1.74
SPO1	YNL012W	RPT4	P53549	437 aa	Known RBP	4.19	□□□□□ -1.74
SPO1	YNL012W	ABZ2	Q03266	374 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	PPM1	Q04081	328 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	COS7	Q07788	383 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	MDY2	Q12285	212 aa		4.19	□□□□□ -1.74
SPO1	YNL012W	BI2	P03873	423 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	SPO7	P18410	259 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	NIP100	P33420	868 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	EFM3	P47163	339 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	TOM22	P49334	152 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	CUE3	P53137	624 aa	Known RBP	4.18	□□□□□ -1.74
SPO1	YNL012W	HST1	P53685	503 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	ALF1	P53904	254 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	TIM11	P81449	96 aa	Predicted RBP	4.18	□□□□□ -1.74
SPO1	YNL012W	SKO1	Q02100	647 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	MLH2	Q07980	695 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	SFG1	Q12507	346 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	URA4	P20051	364 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	CLN1	P20437	546 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	FAD1	P38913	306 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	VPS41	P38959	992 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	YML122C	Q03207	126 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	SEG1	Q04279	960 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	PHO92	Q06390	306 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	HER1	Q12276	1246 aa		4.18	□□□□□ -1.74
SPO1	YNL012W	YER145C-A	A0A023PYF4	145 aa		4.17	□□□□□ -1.74
SPO1	YNL012W	COX3	P00420	269 aa		4.17	□□□□□ -1.74
SPO1	YNL012W	BOS1	P25385	244 aa		4.17	□□□□□ -1.74
SPO1	YNL012W	YPT53	P36019	220 aa		4.17	□□□□□ -1.74
SPO1	YNL012W	YGL138C	P53122	345 aa		4.17	□□□□□ -1.74
SPO1	YNL012W	YNL144C	P53907	740 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 47 ms