RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C MSS18P08593 268 aa11.15□□□□□ -0.62
LCB1YMR296C SFP1P32432 683 aa11.15□□□□□ -0.62
LCB1YMR296C YHR045WP38775 560 aa11.15□□□□□ -0.62
LCB1YMR296C DHH1P39517 506 aaKnown RBP11.15□□□□□ -0.62
LCB1YMR296C YJL070CP40361 888 aa11.15□□□□□ -0.62
LCB1YMR296C GTS1P40956 396 aa11.15□□□□□ -0.62
LCB1YMR296C FKH2P41813 862 aa11.15□□□□□ -0.62
LCB1YMR296C PRP38Q00723 242 aaPredicted RBP11.15□□□□□ -0.62
LCB1YMR296C TRM12Q04235 462 aa11.15□□□□□ -0.62
LCB1YMR296C GMC2Q06201 188 aa11.15□□□□□ -0.62
LCB1YMR296C PIN2Q12057 282 aa11.15□□□□□ -0.62
LCB1YMR296C DBP10Q12389 995 aaKnown RBP11.15□□□□□ -0.62
LCB1YMR296C SNF4P12904 322 aa11.14□□□□□ -0.63
LCB1YMR296C SPT15P13393 240 aaKnown RBP11.14□□□□□ -0.63
LCB1YMR296C RVS161P25343 265 aaKnown RBP11.14□□□□□ -0.63
LCB1YMR296C SPB1P25582 841 aaPredicted RBP11.14□□□□□ -0.63
LCB1YMR296C VPH2P32341 215 aa11.14□□□□□ -0.63
LCB1YMR296C SPS19P32573 292 aaKnown RBP11.14□□□□□ -0.63
LCB1YMR296C CBF5P33322 483 aaKnown RBP RIP-Chip data11.14□□□□□ -0.63not detected
LCB1YMR296C FRE2P36033 711 aa11.14□□□□□ -0.63
LCB1YMR296C DIA3P52290 468 aa11.14□□□□□ -0.63
LCB1YMR296C YDL121CQ07541 149 aa11.14□□□□□ -0.63
LCB1YMR296C HBT1Q07653 1046 aaKnown RBP11.14□□□□□ -0.63
LCB1YMR296C ULA1Q12059 462 aa11.14□□□□□ -0.63
LCB1YMR296C PSY3Q12318 242 aa11.14□□□□□ -0.63
LCB1YMR296C COX3P00420 269 aa11.14□□□□□ -0.63
LCB1YMR296C APA1P16550 321 aaKnown RBP11.14□□□□□ -0.63
LCB1YMR296C BCK2P33306 851 aa11.14□□□□□ -0.63
LCB1YMR296C MRP8P35719 219 aa11.14□□□□□ -0.63
LCB1YMR296C ROT2P38138 954 aa11.14□□□□□ -0.63
LCB1YMR296C MPS3P47069 682 aa11.14□□□□□ -0.63
LCB1YMR296C CIA1Q05583 330 aa11.14□□□□□ -0.63
LCB1YMR296C NUT2Q06213 157 aa11.14□□□□□ -0.63
LCB1YMR296C YKL018C-AQ3E7A7 99 aa11.14□□□□□ -0.63
LCB1YMR296C TEL1P38110 2787 aa11.13□□□□□ -0.63
LCB1YMR296C YKR104WP0CE69 306 aa11.13□□□□□ -0.63
LCB1YMR296C TAL1P15019 335 aaKnown RBP11.13□□□□□ -0.63
LCB1YMR296C PHO87P25360 923 aa11.13□□□□□ -0.63
LCB1YMR296C THI80P35202 319 aa11.13□□□□□ -0.63
LCB1YMR296C UTH1P36135 365 aa11.13□□□□□ -0.63
LCB1YMR296C MPT5P39016 859 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
LCB1YMR296C FAA2P39518 744 aa11.13□□□□□ -0.63
LCB1YMR296C YPT32P51996 222 aaKnown RBP11.13□□□□□ -0.63
LCB1YMR296C YMR111CQ04461 462 aaPredicted RBP11.13□□□□□ -0.63
LCB1YMR296C ARG81P05085 880 aa11.12□□□□□ -0.63
LCB1YMR296C ARG3P05150 338 aa11.12□□□□□ -0.63
LCB1YMR296C POL30P15873 258 aaKnown RBP11.12□□□□□ -0.63
LCB1YMR296C RPL5P26321 297 aaKnown RBP11.12□□□□□ -0.63
LCB1YMR296C FUN30P31380 1131 aa11.12□□□□□ -0.63
LCB1YMR296C ZUO1P32527 433 aaKnown RBP11.12□□□□□ -0.63
LCB1YMR296C CAF4P36130 643 aa11.12□□□□□ -0.63
LCB1YMR296C FAD1P38913 306 aa11.12□□□□□ -0.63
LCB1YMR296C SHY1P53266 389 aa11.12□□□□□ -0.63
LCB1YMR296C TGL5Q12043 749 aa11.12□□□□□ -0.63
LCB1YMR296C SMF3Q12078 473 aaPredicted RBP11.12□□□□□ -0.63
LCB1YMR296C BCY1P07278 416 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C RPL40AP0CH08 128 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C RPL40BP0CH09 128 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C EPT1P22140 391 aa11.11□□□□□ -0.63
LCB1YMR296C RPT5P33297 434 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C SKG1P36169 355 aa11.11□□□□□ -0.63
LCB1YMR296C IML3P38265 245 aa11.11□□□□□ -0.63
LCB1YMR296C PCL5P38794 229 aa11.11□□□□□ -0.63
LCB1YMR296C VHR1P40522 640 aa11.11□□□□□ -0.63
LCB1YMR296C YFT2Q06676 274 aa11.11□□□□□ -0.63
LCB1YMR296C SRO7Q12038 1033 aa11.11□□□□□ -0.63
LCB1YMR296C JLP1Q12358 412 aa11.11□□□□□ -0.63
LCB1YMR296C INH1P01097 85 aa11.11□□□□□ -0.63
LCB1YMR296C SPT3P06844 337 aa11.11□□□□□ -0.63
LCB1YMR296C ERG6P25087 383 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C RFA2P26754 273 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C CDC3P32457 520 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C RPS1AP33442 255 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C MRPL17P36528 281 aa11.11□□□□□ -0.63
LCB1YMR296C FTH1P38310 465 aa11.11□□□□□ -0.63
LCB1YMR296C RRP3P38712 501 aaKnown RBP11.11□□□□□ -0.63
LCB1YMR296C DSS1P39112 969 aa11.11□□□□□ -0.63
LCB1YMR296C GCD10P41814 478 aa11.11□□□□□ -0.63
LCB1YMR296C RMR1P53060 241 aa11.11□□□□□ -0.63
LCB1YMR296C YDL129WQ07555 291 aa11.11□□□□□ -0.63
LCB1YMR296C UAF30Q08747 228 aa11.11□□□□□ -0.63
LCB1YMR296C BUD7Q08754 746 aa11.11□□□□□ -0.63
LCB1YMR296C NTO1Q12311 748 aa11.11□□□□□ -0.63
LCB1YMR296C HXK2P04807 486 aaKnown RBP11.1□□□□□ -0.63
LCB1YMR296C MSS116P15424 664 aaKnown RBP11.1□□□□□ -0.63
LCB1YMR296C TIF3P34167 436 aaKnown RBP11.1□□□□□ -0.63
LCB1YMR296C MDJ1P35191 511 aa11.1□□□□□ -0.63
LCB1YMR296C DBP8P38719 431 aa11.1□□□□□ -0.63
LCB1YMR296C IRR1P40541 1150 aa11.1□□□□□ -0.63
LCB1YMR296C YPS6P40583 537 aa11.1□□□□□ -0.63
LCB1YMR296C NUP85P46673 744 aa11.1□□□□□ -0.63
LCB1YMR296C NAS6P50086 228 aa11.1□□□□□ -0.63
LCB1YMR296C SWS2P53937 143 aa11.1□□□□□ -0.63
LCB1YMR296C SSL1Q04673 461 aaPredicted RBP11.1□□□□□ -0.63
LCB1YMR296C ATG17Q06410 417 aa11.1□□□□□ -0.63
LCB1YMR296C REH1Q06709 432 aa11.1□□□□□ -0.63
LCB1YMR296C RTT10Q08924 1013 aa11.1□□□□□ -0.63
LCB1YMR296C COR1P07256 457 aa11.09□□□□□ -0.63
LCB1YMR296C YAP1P19880 650 aaKnown RBP11.09□□□□□ -0.63
LCB1YMR296C TYR1P20049 452 aa11.09□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms