RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PLM2Q04383 521 aa3.81□□□□□ -1.8
SSO2YMR183C CRN1Q06440 651 aa3.81□□□□□ -1.8
SSO2YMR183C YDL242WQ07746 117 aa3.81□□□□□ -1.8
SSO2YMR183C APC5Q08683 685 aa3.81□□□□□ -1.8
SSO2YMR183C YPL272CQ08984 517 aa3.81□□□□□ -1.8
SSO2YMR183C RLM1Q12224 676 aa3.81□□□□□ -1.8
SSO2YMR183C YDR061WQ12298 539 aa3.81□□□□□ -1.8
SSO2YMR183C PFK27Q12471 397 aaPredicted RBP3.81□□□□□ -1.8
SSO2YMR183C CHD1P32657 1468 aa3.8□□□□□ -1.8
SSO2YMR183C YLR278CQ05854 1341 aa3.8□□□□□ -1.8
SSO2YMR183C MF(ALPHA)1P01149 165 aa3.8□□□□□ -1.8
SSO2YMR183C DAP2P18962 818 aa3.8□□□□□ -1.8
SSO2YMR183C MRE11P32829 692 aa3.8□□□□□ -1.8
SSO2YMR183C SEC66P33754 206 aa3.8□□□□□ -1.8
SSO2YMR183C ASK1P35734 292 aa3.8□□□□□ -1.8
SSO2YMR183C EBP2P36049 427 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C MNN2P38069 597 aa3.8□□□□□ -1.8
SSO2YMR183C TIF5P38431 405 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C IMD2P38697 523 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C YNG2P38806 282 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C ARO9P38840 513 aaPredicted RBP3.8□□□□□ -1.8
SSO2YMR183C SEC31P38968 1273 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C SAP1P39955 897 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C YIL024CP40543 189 aa3.8□□□□□ -1.8
SSO2YMR183C CFD1P40558 293 aa3.8□□□□□ -1.8
SSO2YMR183C GCD10P41814 478 aa3.8□□□□□ -1.8
SSO2YMR183C YGR149WP48236 432 aa3.8□□□□□ -1.8
SSO2YMR183C IMD3P50095 523 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C AQR1P53943 586 aa3.8□□□□□ -1.8
SSO2YMR183C TOF2Q02208 771 aa3.8□□□□□ -1.8
SSO2YMR183C RBS1Q05672 457 aaKnown RBP3.8□□□□□ -1.8
SSO2YMR183C YBR255C-AQ3E776 120 aa3.8□□□□□ -1.8
SSO2YMR183C HIP1P06775 603 aa3.79□□□□□ -1.8
SSO2YMR183C GAL7P08431 366 aa3.79□□□□□ -1.8
SSO2YMR183C DBP3P20447 523 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C RML2P32611 393 aa3.79□□□□□ -1.8
SSO2YMR183C BFR1P38934 470 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SSO2YMR183C FUN12P39730 1002 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C BUR6P40096 142 aa3.79□□□□□ -1.8
SSO2YMR183C YTA12P40341 825 aa3.79□□□□□ -1.8
SSO2YMR183C EPL1P43572 832 aa3.79□□□□□ -1.8
SSO2YMR183C SMC3P47037 1230 aa3.79□□□□□ -1.8
SSO2YMR183C APT1P49435 187 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C DIA3P52290 468 aa3.79□□□□□ -1.8
SSO2YMR183C SCW4P53334 386 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C DCP2P53550 970 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C COP1P53622 1201 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C AAT1Q01802 451 aa3.79□□□□□ -1.8
SSO2YMR183C CWC21Q03375 135 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C FIN1Q03898 291 aa3.79□□□□□ -1.8
SSO2YMR183C MRPL1Q04599 285 aa3.79□□□□□ -1.8
SSO2YMR183C YML053CQ04978 212 aa3.79□□□□□ -1.8
SSO2YMR183C UAF30Q08747 228 aa3.79□□□□□ -1.8
SSO2YMR183C FRE3Q08905 711 aa3.79□□□□□ -1.8
SSO2YMR183C LEU9Q12166 604 aaKnown RBP3.79□□□□□ -1.8
SSO2YMR183C UBX3Q12229 455 aa3.79□□□□□ -1.8
SSO2YMR183C RTC1Q08281 1341 aa3.78□□□□□ -1.8
SSO2YMR183C YPR089WO13585 888 aa3.78□□□□□ -1.8
SSO2YMR183C TAL1P15019 335 aaKnown RBP3.78□□□□□ -1.8
SSO2YMR183C SRV2P17555 526 aaKnown RBP3.78□□□□□ -1.8
SSO2YMR183C URA4P20051 364 aa3.78□□□□□ -1.8
SSO2YMR183C PPH22P23595 377 aa3.78□□□□□ -1.8
SSO2YMR183C BUD5P25300 642 aaPredicted RBP3.78□□□□□ -1.8
SSO2YMR183C SNT1P25357 1226 aa3.78□□□□□ -1.8
SSO2YMR183C ADH7P25377 361 aa3.78□□□□□ -1.8
SSO2YMR183C COQ3P27680 312 aa3.78□□□□□ -1.8
SSO2YMR183C SIP1P32578 815 aa3.78□□□□□ -1.8
SSO2YMR183C RRP1P35178 278 aaPredicted RBP3.78□□□□□ -1.8
SSO2YMR183C TUL1P36096 758 aa3.78□□□□□ -1.8
SSO2YMR183C MIC60P36112 540 aa3.78□□□□□ -1.8
SSO2YMR183C NTC20P38302 140 aaPredicted RBP3.78□□□□□ -1.8
SSO2YMR183C SMC2P38989 1170 aaKnown RBP3.78□□□□□ -1.8
SSO2YMR183C CIN1P40987 1014 aa3.78□□□□□ -1.8
SSO2YMR183C UBX6P47049 396 aa3.78□□□□□ -1.8
SSO2YMR183C NUP84P52891 726 aa3.78□□□□□ -1.8
SSO2YMR183C YGL138CP53122 345 aa3.78□□□□□ -1.8
SSO2YMR183C ABZ2Q03266 374 aa3.78□□□□□ -1.8
SSO2YMR183C SNU56Q03782 492 aaKnown RBP3.78□□□□□ -1.8
SSO2YMR183C PDS5Q04264 1277 aa3.78□□□□□ -1.8
SSO2YMR183C RPC11Q04307 110 aaPredicted RBP3.78□□□□□ -1.8
SSO2YMR183C RRP45Q05636 305 aaKnown RBP3.78□□□□□ -1.8
SSO2YMR183C RAD34Q06665 692 aa3.78□□□□□ -1.8
SSO2YMR183C YER190C-BP0CX94 160 aa3.77□□□□□ -1.81
SSO2YMR183C YEL077W-AP0CX95 160 aa3.77□□□□□ -1.81
SSO2YMR183C YGR296C-BP0CX96 160 aa3.77□□□□□ -1.81
SSO2YMR183C YPL283W-BP0CX97 160 aa3.77□□□□□ -1.81
SSO2YMR183C YPR204C-AP0CX98 160 aa3.77□□□□□ -1.81
SSO2YMR183C MRP13P12686 339 aa3.77□□□□□ -1.81
SSO2YMR183C ARO3P14843 370 aaKnown RBP3.77□□□□□ -1.81
SSO2YMR183C PRD1P25375 712 aa3.77□□□□□ -1.81
SSO2YMR183C YUR1P26725 428 aa3.77□□□□□ -1.81
SSO2YMR183C IDH2P28241 369 aaKnown RBP3.77□□□□□ -1.81
SSO2YMR183C CRM1P30822 1084 aaKnown RBP3.77□□□□□ -1.81
SSO2YMR183C AFG1P32317 509 aa3.77□□□□□ -1.81
SSO2YMR183C SSE2P32590 693 aaKnown RBP3.77□□□□□ -1.81
SSO2YMR183C YME1P32795 747 aa3.77□□□□□ -1.81
SSO2YMR183C TIF3P34167 436 aaKnown RBP3.77□□□□□ -1.81
SSO2YMR183C YUH1P35127 236 aa3.77□□□□□ -1.81
SSO2YMR183C NTR2P36118 322 aaPredicted RBP3.77□□□□□ -1.81
SSO2YMR183C YMR124WP39523 943 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms