RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W SEC39Q12745 709 aa2.53□□□□□ -2
ECM5YMR176W EDE1P34216 1381 aa2.53□□□□□ -2
ECM5YMR176W BYE1P36106 594 aa2.53□□□□□ -2
ECM5YMR176W RPL32P38061 130 aaKnown RBP2.53□□□□□ -2
ECM5YMR176W RPA49Q01080 415 aaPredicted RBP2.53□□□□□ -2
ECM5YMR176W ECM30Q06673 1274 aa2.53□□□□□ -2
ECM5YMR176W YLR112WQ12130 139 aa2.53□□□□□ -2
ECM5YMR176W SFI1Q12369 946 aa2.53□□□□□ -2
ECM5YMR176W SNF3P10870 884 aa2.53□□□□□ -2
ECM5YMR176W CMC1P36064 111 aa2.53□□□□□ -2
ECM5YMR176W CIN4P39110 191 aa2.53□□□□□ -2
ECM5YMR176W XBP1P40489 647 aa2.53□□□□□ -2
ECM5YMR176W NUP100Q02629 959 aa2.53□□□□□ -2
ECM5YMR176W YDL007C-AQ2V2Q0 85 aa2.53□□□□□ -2
ECM5YMR176W CBP1P07252 654 aa2.53□□□□□ -2.01
ECM5YMR176W PEP4P07267 405 aaKnown RBP2.53□□□□□ -2.01
ECM5YMR176W RPS2P25443 254 aaKnown RBP2.53□□□□□ -2.01
ECM5YMR176W ICS2P38284 255 aa2.53□□□□□ -2.01
ECM5YMR176W MSR1P38714 643 aa2.53□□□□□ -2.01
ECM5YMR176W PTR3P43606 678 aa2.53□□□□□ -2.01
ECM5YMR176W STB2P46679 850 aa2.53□□□□□ -2.01
ECM5YMR176W SLG1P54867 378 aa2.53□□□□□ -2.01
ECM5YMR176W RBS1Q05672 457 aaKnown RBP2.53□□□□□ -2.01
ECM5YMR176W POS5Q06892 414 aa2.53□□□□□ -2.01
ECM5YMR176W YOR365CQ08844 703 aa2.53□□□□□ -2.01
ECM5YMR176W YIL177CP40434 1758 aa2.52□□□□□ -2.01
ECM5YMR176W YJL225CP40889 1758 aa2.52□□□□□ -2.01
ECM5YMR176W MDM10P18409 493 aa2.52□□□□□ -2.01
ECM5YMR176W PMT1P33775 817 aa2.52□□□□□ -2.01
ECM5YMR176W SAS3P34218 831 aa2.52□□□□□ -2.01
ECM5YMR176W FLO5P38894 1075 aa2.52□□□□□ -2.01
ECM5YMR176W MCP2Q06567 569 aa2.52□□□□□ -2.01
ECM5YMR176W YDL218WQ07629 317 aa2.52□□□□□ -2.01
ECM5YMR176W ATX2Q12067 313 aa2.52□□□□□ -2.01
ECM5YMR176W SOL4P53315 255 aa2.52□□□□□ -2.01
ECM5YMR176W YDR239CQ03780 787 aa2.52□□□□□ -2.01
ECM5YMR176W YMR160WQ03823 816 aa2.52□□□□□ -2.01
ECM5YMR176W HER1Q12276 1246 aa2.52□□□□□ -2.01
ECM5YMR176W PDX1P16451 410 aa2.52□□□□□ -2.01
ECM5YMR176W YHR210CP38893 341 aa2.52□□□□□ -2.01
ECM5YMR176W VPS25P47142 202 aa2.52□□□□□ -2.01
ECM5YMR176W YVH1Q02256 364 aaKnown RBP2.52□□□□□ -2.01
ECM5YMR176W CTL1Q03220 320 aaKnown RBP2.52□□□□□ -2.01
ECM5YMR176W YLR345WQ06137 509 aa2.52□□□□□ -2.01
ECM5YMR176W GSH2Q08220 491 aa2.52□□□□□ -2.01
ECM5YMR176W SEC7P11075 2009 aaKnown RBP2.52□□□□□ -2.01
ECM5YMR176W PRP2P20095 876 aaPredicted RBP2.51□□□□□ -2.01
ECM5YMR176W HXT14P42833 540 aa2.51□□□□□ -2.01
ECM5YMR176W EKI1Q03764 534 aa2.51□□□□□ -2.01
ECM5YMR176W RPL42AP0CX27 106 aaKnown RBP2.51□□□□□ -2.01
ECM5YMR176W RPL42BP0CX28 106 aaKnown RBP2.51□□□□□ -2.01
ECM5YMR176W GND1P38720 489 aaKnown RBP2.51□□□□□ -2.01
ECM5YMR176W KEL1P38853 1164 aaKnown RBP2.51□□□□□ -2.01
ECM5YMR176W YMR147WP40218 223 aaKnown RBP2.51□□□□□ -2.01
ECM5YMR176W FET5P43561 622 aa2.51□□□□□ -2.01
ECM5YMR176W ARX1Q03862 593 aaKnown RBP2.51□□□□□ -2.01
ECM5YMR176W EFM2P38347 419 aa2.51□□□□□ -2.01
ECM5YMR176W PCL6P40038 420 aa2.51□□□□□ -2.01
ECM5YMR176W YGR126WP53274 230 aa2.51□□□□□ -2.01
ECM5YMR176W TOF2Q02208 771 aa2.51□□□□□ -2.01
ECM5YMR176W IZH1Q03419 316 aa2.51□□□□□ -2.01
ECM5YMR176W USO1P25386 1790 aa2.51□□□□□ -2.01
ECM5YMR176W YFL068WP0CX99 160 aa2.5□□□□□ -2.01
ECM5YMR176W YLL066W-AP0CY00 160 aa2.5□□□□□ -2.01
ECM5YMR176W YLL067W-AP0CY01 160 aa2.5□□□□□ -2.01
ECM5YMR176W RPB8P20436 146 aa2.5□□□□□ -2.01
ECM5YMR176W ADK2P26364 225 aa2.5□□□□□ -2.01
ECM5YMR176W STV1P37296 890 aa2.5□□□□□ -2.01
ECM5YMR176W YMR124WP39523 943 aaKnown RBP2.5□□□□□ -2.01
ECM5YMR176W YJR154WP47181 346 aa2.5□□□□□ -2.01
ECM5YMR176W ESBP6P53918 673 aa2.5□□□□□ -2.01
ECM5YMR176W RHO4Q00246 291 aa2.5□□□□□ -2.01
ECM5YMR176W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
ECM5YMR176W YPR089WO13585 888 aa2.5□□□□□ -2.01
ECM5YMR176W HXT3P32466 567 aaKnown RBP2.5□□□□□ -2.01
ECM5YMR176W YME1P32795 747 aa2.5□□□□□ -2.01
ECM5YMR176W SPC34P36131 295 aa2.5□□□□□ -2.01
ECM5YMR176W BUD32P53323 261 aa2.5□□□□□ -2.01
ECM5YMR176W STP1Q00947 519 aa2.5□□□□□ -2.01
ECM5YMR176W PDS5Q04264 1277 aa2.5□□□□□ -2.01
ECM5YMR176W RRD2Q12461 358 aa2.5□□□□□ -2.01
ECM5YMR176W SUC2P00724 532 aa2.5□□□□□ -2.01
ECM5YMR176W RAD52P06778 471 aaKnown RBP2.5□□□□□ -2.01
ECM5YMR176W GID7P25569 745 aa2.5□□□□□ -2.01
ECM5YMR176W SNG1P46950 547 aa2.5□□□□□ -2.01
ECM5YMR176W ECI1Q05871 280 aa2.5□□□□□ -2.01
ECM5YMR176W APL5Q08951 932 aaKnown RBP2.5□□□□□ -2.01
ECM5YMR176W SNF2P22082 1703 aa2.5□□□□□ -2.01
ECM5YMR176W LAG1P38703 411 aa2.5□□□□□ -2.01
ECM5YMR176W TIF4631P39935 952 aaKnown RBP2.5□□□□□ -2.01
ECM5YMR176W YIL152WP40455 235 aa2.5□□□□□ -2.01
ECM5YMR176W RTS2P40962 232 aa2.5□□□□□ -2.01
ECM5YMR176W ATG27P46989 271 aa2.5□□□□□ -2.01
ECM5YMR176W NET1P47035 1189 aa2.5□□□□□ -2.01
ECM5YMR176W HEF3P53978 1044 aaKnown RBP2.5□□□□□ -2.01
ECM5YMR176W YDL057WQ07379 328 aa2.5□□□□□ -2.01
ECM5YMR176W BSC1Q12140 328 aa2.5□□□□□ -2.01
ECM5YMR176W RPL31BP0C2H9 113 aaKnown RBP2.49□□□□□ -2.01
ECM5YMR176W HOM3P10869 527 aa2.49□□□□□ -2.01
ECM5YMR176W CLB3P24870 427 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms