RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W AUR1P36107 401 aaPredicted RBP2.58□□□□□ -2
DDR48YMR173W MAL33P38157 468 aa2.58□□□□□ -2
DDR48YMR173W BSC5P53755 489 aa2.58□□□□□ -2
DDR48YMR173W CBK1P53894 756 aa2.58□□□□□ -2
DDR48YMR173W YSA1Q01976 231 aa2.58□□□□□ -2
DDR48YMR173W IRC15Q02733 499 aa2.58□□□□□ -2
DDR48YMR173W RAD30Q04049 632 aa2.58□□□□□ -2
DDR48YMR173W LUC7Q07508 261 aaPredicted RBP2.58□□□□□ -2
DDR48YMR173W RAD52P06778 471 aaKnown RBP2.57□□□□□ -2
DDR48YMR173W YIH1P25637 258 aa2.57□□□□□ -2
DDR48YMR173W HXT1P32465 570 aa2.57□□□□□ -2
DDR48YMR173W ALK1P43633 760 aaKnown RBP2.57□□□□□ -2
DDR48YMR173W IVY1Q04934 453 aa2.57□□□□□ -2
DDR48YMR173W FMP40Q08968 688 aaPredicted RBP2.57□□□□□ -2
DDR48YMR173W ERV2Q12284 196 aa2.57□□□□□ -2
DDR48YMR173W SPE4Q12455 300 aa2.57□□□□□ -2
DDR48YMR173W SKM1Q12469 655 aa2.57□□□□□ -2
DDR48YMR173W SPR1P32603 445 aa2.56□□□□□ -2
DDR48YMR173W YEL045CP32616 141 aa2.56□□□□□ -2
DDR48YMR173W DUG2P38149 878 aa2.56□□□□□ -2
DDR48YMR173W RFS1P38234 210 aaKnown RBP2.56□□□□□ -2
DDR48YMR173W CCT6P39079 546 aa2.56□□□□□ -2
DDR48YMR173W DPH1P40487 425 aaKnown RBP2.56□□□□□ -2
DDR48YMR173W YGR210CP42942 411 aa2.56□□□□□ -2
DDR48YMR173W YML131WQ03102 365 aa2.56□□□□□ -2
DDR48YMR173W BUD22Q04347 519 aaKnown RBP2.56□□□□□ -2
DDR48YMR173W RRN11Q04712 507 aa2.56□□□□□ -2
DDR48YMR173W VIP1Q06685 1146 aaKnown RBP2.56□□□□□ -2
DDR48YMR173W KEL3Q08979 651 aaPredicted RBP2.56□□□□□ -2
DDR48YMR173W ART10P18634 518 aaKnown RBP2.55□□□□□ -2
DDR48YMR173W ISY1P21374 235 aaPredicted RBP2.55□□□□□ -2
DDR48YMR173W FUN19P28003 413 aaPredicted RBP2.55□□□□□ -2
DDR48YMR173W YIM1P28625 365 aa2.55□□□□□ -2
DDR48YMR173W ARO2P28777 376 aaKnown RBP2.55□□□□□ -2
DDR48YMR173W YME1P32795 747 aa2.55□□□□□ -2
DDR48YMR173W SHP1P34223 423 aa2.55□□□□□ -2
DDR48YMR173W GWT1P47026 490 aa2.55□□□□□ -2
DDR48YMR173W SDT1P53078 280 aa2.55□□□□□ -2
DDR48YMR173W YGL039WP53183 348 aaKnown RBP2.55□□□□□ -2
DDR48YMR173W WSC2P53832 503 aa2.55□□□□□ -2
DDR48YMR173W OPY2Q06810 360 aa2.55□□□□□ -2
DDR48YMR173W YOR387CQ08910 206 aa2.55□□□□□ -2
DDR48YMR173W HSH49Q99181 213 aaPredicted RBP2.55□□□□□ -2
DDR48YMR173W HIP1P06775 603 aa2.54□□□□□ -2
DDR48YMR173W MFT1P33441 392 aaKnown RBP2.54□□□□□ -2
DDR48YMR173W TIF4631P39935 952 aaKnown RBP2.54□□□□□ -2
DDR48YMR173W REE1P40893 198 aa2.54□□□□□ -2
DDR48YMR173W ELP2P42935 788 aa2.54□□□□□ -2
DDR48YMR173W GPI1P53306 609 aa2.54□□□□□ -2
DDR48YMR173W YML037CQ03703 340 aa2.54□□□□□ -2
DDR48YMR173W RBS1Q05672 457 aaKnown RBP2.54□□□□□ -2
DDR48YMR173W PHO92Q06390 306 aa2.54□□□□□ -2
DDR48YMR173W SSP2Q08646 371 aa2.54□□□□□ -2
DDR48YMR173W NOP58Q12499 511 aaKnown RBP2.54□□□□□ -2
DDR48YMR173W HHF1P02309 103 aaKnown RBP2.53□□□□□ -2
DDR48YMR173W GLK1P17709 500 aaKnown RBP2.53□□□□□ -2
DDR48YMR173W CHS3P29465 1165 aa2.53□□□□□ -2
DDR48YMR173W PAD1P33751 242 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
DDR48YMR173W TCM62P38228 572 aaKnown RBP2.53□□□□□ -2
DDR48YMR173W MUM2P38236 366 aa2.53□□□□□ -2
DDR48YMR173W TOF2Q02208 771 aa2.53□□□□□ -2
DDR48YMR173W PAL1Q05518 499 aaKnown RBP2.53□□□□□ -2
DDR48YMR173W YDL057WQ07379 328 aa2.53□□□□□ -2
DDR48YMR173W CFT2Q12102 859 aaPredicted RBP2.53□□□□□ -2
DDR48YMR173W NMD4Q12129 218 aa2.53□□□□□ -2
DDR48YMR173W MRP13P12686 339 aa2.52□□□□□ -2.01
DDR48YMR173W CPR1P14832 162 aaKnown RBP2.52□□□□□ -2.01
DDR48YMR173W HSC82P15108 705 aaKnown RBP2.52□□□□□ -2.01
DDR48YMR173W HEM15P16622 393 aa2.52□□□□□ -2.01
DDR48YMR173W PRP2P20095 876 aaPredicted RBP2.52□□□□□ -2.01
DDR48YMR173W YCK1P23291 538 aa2.52□□□□□ -2.01
DDR48YMR173W ELO2P25358 347 aa2.52□□□□□ -2.01
DDR48YMR173W LSB5P25369 354 aa2.52□□□□□ -2.01
DDR48YMR173W NAM9P27929 486 aa2.52□□□□□ -2.01
DDR48YMR173W MSN2P33748 704 aa2.52□□□□□ -2.01
DDR48YMR173W YBL059WP34224 193 aa2.52□□□□□ -2.01
DDR48YMR173W BNA4P38169 460 aa2.52□□□□□ -2.01
DDR48YMR173W PTH1P38876 190 aaKnown RBP2.52□□□□□ -2.01
DDR48YMR173W CAF40P53829 373 aa2.52□□□□□ -2.01
DDR48YMR173W ARK1P53974 638 aa2.52□□□□□ -2.01
DDR48YMR173W ELP3Q02908 557 aaKnown RBP2.52□□□□□ -2.01
DDR48YMR173W MHR1Q06630 226 aa2.52□□□□□ -2.01
DDR48YMR173W THP1Q08231 455 aa2.52□□□□□ -2.01
DDR48YMR173W TMS1Q12116 473 aa2.52□□□□□ -2.01
DDR48YMR173W BRR1Q99177 341 aaPredicted RBP2.52□□□□□ -2.01
DDR48YMR173W DEG1P31115 442 aaKnown RBP2.51□□□□□ -2.01
DDR48YMR173W MRP4P32902 394 aa2.51□□□□□ -2.01
DDR48YMR173W FUI1P38196 639 aa2.51□□□□□ -2.01
DDR48YMR173W YBL029WP38201 376 aa2.51□□□□□ -2.01
DDR48YMR173W FLC2P39719 783 aa2.51□□□□□ -2.01
DDR48YMR173W FAU1P40099 211 aa2.51□□□□□ -2.01
DDR48YMR173W AIM22P47051 409 aa2.51□□□□□ -2.01
DDR48YMR173W YJR008WP47085 338 aa2.51□□□□□ -2.01
DDR48YMR173W OGG1P53397 376 aaPredicted RBP2.51□□□□□ -2.01
DDR48YMR173W HEF3P53978 1044 aaKnown RBP2.51□□□□□ -2.01
DDR48YMR173W FIN1Q03898 291 aa2.51□□□□□ -2.01
DDR48YMR173W PBA1Q05778 276 aa2.51□□□□□ -2.01
DDR48YMR173W COQ9Q05779 260 aa2.51□□□□□ -2.01
DDR48YMR173W YEH1Q07804 573 aa2.51□□□□□ -2.01
DDR48YMR173W ESA1Q08649 445 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms