RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C FMS1P50264 508 aa4.46□□□□□ -1.7
VPS71YML041C PKP2P53170 491 aa4.46□□□□□ -1.7
VPS71YML041C YGR111WP53265 400 aa4.46□□□□□ -1.7
VPS71YML041C ARP10Q04549 284 aa4.46□□□□□ -1.7
VPS71YML041C RSF1Q05043 376 aa4.46□□□□□ -1.7
VPS71YML041C YDR341CQ05506 607 aaKnown RBP4.46□□□□□ -1.7
VPS71YML041C ECM30Q06673 1274 aa4.46□□□□□ -1.7
VPS71YML041C GPM3Q12326 303 aa4.46□□□□□ -1.7
VPS71YML041C YMR085WP0CF18 432 aa4.45□□□□□ -1.7
VPS71YML041C SNF3P10870 884 aa4.45□□□□□ -1.7
VPS71YML041C TRX1P22217 103 aaKnown RBP4.45□□□□□ -1.7
VPS71YML041C RRP7P25368 297 aaPredicted RBP4.45□□□□□ -1.7
VPS71YML041C COQ3P27680 312 aa4.45□□□□□ -1.7
VPS71YML041C YME2P32843 850 aa4.45□□□□□ -1.7
VPS71YML041C UIP5P36137 443 aa4.45□□□□□ -1.7
VPS71YML041C THI2P38141 450 aa4.45□□□□□ -1.7
VPS71YML041C COP1P53622 1201 aaKnown RBP4.45□□□□□ -1.7
VPS71YML041C RRP45Q05636 305 aaKnown RBP4.45□□□□□ -1.7
VPS71YML041C MED2Q12124 431 aa4.45□□□□□ -1.7
VPS71YML041C RRI1Q12468 440 aa4.45□□□□□ -1.7
VPS71YML041C SUC2P00724 532 aa4.44□□□□□ -1.7
VPS71YML041C YML002WP0CF17 737 aa4.44□□□□□ -1.7
VPS71YML041C YER190C-BP0CX94 160 aa4.44□□□□□ -1.7
VPS71YML041C YEL077W-AP0CX95 160 aa4.44□□□□□ -1.7
VPS71YML041C YGR296C-BP0CX96 160 aa4.44□□□□□ -1.7
VPS71YML041C YPL283W-BP0CX97 160 aa4.44□□□□□ -1.7
VPS71YML041C YPR204C-AP0CX98 160 aa4.44□□□□□ -1.7
VPS71YML041C SUI2P20459 304 aaKnown RBP4.44□□□□□ -1.7
VPS71YML041C SHP1P34223 423 aa4.44□□□□□ -1.7
VPS71YML041C TUL1P36096 758 aa4.44□□□□□ -1.7
VPS71YML041C DAD2P36162 133 aa4.44□□□□□ -1.7
VPS71YML041C TOM71P38825 639 aaKnown RBP4.44□□□□□ -1.7
VPS71YML041C MBB1P39534 108 aa4.44□□□□□ -1.7
VPS71YML041C ALK1P43633 760 aaKnown RBP4.44□□□□□ -1.7
VPS71YML041C YGL138CP53122 345 aa4.44□□□□□ -1.7
VPS71YML041C YGR126WP53274 230 aa4.44□□□□□ -1.7
VPS71YML041C CAF130P53280 1122 aaPredicted RBP4.44□□□□□ -1.7
VPS71YML041C SKO1Q02100 647 aa4.44□□□□□ -1.7
VPS71YML041C PRP42Q03776 544 aaKnown RBP4.44□□□□□ -1.7
VPS71YML041C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
VPS71YML041C CUE5Q08412 411 aaKnown RBP4.44□□□□□ -1.7
VPS71YML041C DCI1Q08558 271 aa4.44□□□□□ -1.7
VPS71YML041C CFT2Q12102 859 aaPredicted RBP4.44□□□□□ -1.7
VPS71YML041C NFI1Q12216 726 aa4.44□□□□□ -1.7
VPS71YML041C RPN5Q12250 445 aaKnown RBP4.44□□□□□ -1.7
VPS71YML041C FRE6Q12473 712 aa4.44□□□□□ -1.7
VPS71YML041C PGK1P00560 416 aaKnown RBP4.43□□□□□ -1.7
VPS71YML041C SRV2P17555 526 aaKnown RBP4.43□□□□□ -1.7
VPS71YML041C URE2P23202 354 aaKnown RBP4.43□□□□□ -1.7
VPS71YML041C PPH22P23595 377 aa4.43□□□□□ -1.7
VPS71YML041C SPB1P25582 841 aaPredicted RBP4.43□□□□□ -1.7
VPS71YML041C DUG2P38149 878 aa4.43□□□□□ -1.7
VPS71YML041C TCM62P38228 572 aaKnown RBP4.43□□□□□ -1.7
VPS71YML041C RRT2P38332 387 aa4.43□□□□□ -1.7
VPS71YML041C TIF4631P39935 952 aaKnown RBP4.43□□□□□ -1.7
VPS71YML041C CFD1P40558 293 aa4.43□□□□□ -1.7
VPS71YML041C GPI8P49018 411 aa4.43□□□□□ -1.7
VPS71YML041C SOL4P53315 255 aa4.43□□□□□ -1.7
VPS71YML041C HEF3P53978 1044 aaKnown RBP4.43□□□□□ -1.7
VPS71YML041C SEC5P89102 971 aa4.43□□□□□ -1.7
VPS71YML041C VTC3Q02725 835 aa4.43□□□□□ -1.7
VPS71YML041C YPL107WQ02873 248 aa4.43□□□□□ -1.7
VPS71YML041C RPL6BP05739 176 aaKnown RBP4.42□□□□□ -1.7
VPS71YML041C HIP1P06775 603 aa4.42□□□□□ -1.7
VPS71YML041C COR1P07256 457 aa4.42□□□□□ -1.7
VPS71YML041C SPS4P09937 338 aa4.42□□□□□ -1.7
VPS71YML041C HOM2P13663 365 aaKnown RBP4.42□□□□□ -1.7
VPS71YML041C RPS2P25443 254 aaKnown RBP4.42□□□□□ -1.7
VPS71YML041C YIM1P28625 365 aa4.42□□□□□ -1.7
VPS71YML041C MSP1P28737 362 aa4.42□□□□□ -1.7
VPS71YML041C MSN2P33748 704 aa4.42□□□□□ -1.7
VPS71YML041C LAS1P36146 502 aaPredicted RBP4.42□□□□□ -1.7
VPS71YML041C LAG1P38703 411 aa4.42□□□□□ -1.7
VPS71YML041C COS5P47187 383 aa4.42□□□□□ -1.7
VPS71YML041C YGR149WP48236 432 aa4.42□□□□□ -1.7
VPS71YML041C YGL108CP53139 140 aa4.42□□□□□ -1.7
VPS71YML041C RPL6AQ02326 176 aaKnown RBP4.42□□□□□ -1.7
VPS71YML041C NUP100Q02629 959 aa4.42□□□□□ -1.7
VPS71YML041C POS5Q06892 414 aa4.42□□□□□ -1.7
VPS71YML041C COS7Q07788 383 aa4.42□□□□□ -1.7
VPS71YML041C UAF30Q08747 228 aa4.42□□□□□ -1.7
VPS71YML041C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
VPS71YML041C BRR1Q99177 341 aaPredicted RBP4.42□□□□□ -1.7
VPS71YML041C TAD3Q9URQ3 322 aa4.42□□□□□ -1.7
VPS71YML041C RAD52P06778 471 aaKnown RBP4.41□□□□□ -1.7
VPS71YML041C DAL5P15365 543 aa4.41□□□□□ -1.7
VPS71YML041C PHO84P25297 587 aaKnown RBP4.41□□□□□ -1.7
VPS71YML041C RAD14P28519 371 aa4.41□□□□□ -1.7
VPS71YML041C SMI1P32566 505 aa4.41□□□□□ -1.7
VPS71YML041C HEL1P36113 551 aa4.41□□□□□ -1.7
VPS71YML041C SLM4P38247 162 aa4.41□□□□□ -1.7
VPS71YML041C EFM4P40516 257 aa4.41□□□□□ -1.7
VPS71YML041C SNO3P43544 222 aa4.41□□□□□ -1.7
VPS71YML041C FYV8P46949 817 aaKnown RBP4.41□□□□□ -1.7
VPS71YML041C SNG1P46950 547 aa4.41□□□□□ -1.7
VPS71YML041C BUD32P53323 261 aa4.41□□□□□ -1.7
VPS71YML041C RPT4P53549 437 aaKnown RBP4.41□□□□□ -1.7
VPS71YML041C YVH1Q02256 364 aaKnown RBP4.41□□□□□ -1.7
VPS71YML041C SIL1Q08199 421 aa4.41□□□□□ -1.7
VPS71YML041C APL5Q08951 932 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms