RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C PRP2P20095 876 aaPredicted RBP2.11□□□□□ -2.07
SGD1YLR336C ACH1P32316 526 aa2.11□□□□□ -2.07
SGD1YLR336C RAD24P32641 659 aa2.11□□□□□ -2.07
SGD1YLR336C SAS3P34218 831 aa2.11□□□□□ -2.07
SGD1YLR336C MBB1P39534 108 aa2.11□□□□□ -2.07
SGD1YLR336C LSM5P40089 93 aaKnown RBP2.11□□□□□ -2.07
SGD1YLR336C YJR154WP47181 346 aa2.11□□□□□ -2.07
SGD1YLR336C HEF3P53978 1044 aaKnown RBP2.11□□□□□ -2.07
SGD1YLR336C PDS5Q04264 1277 aa2.11□□□□□ -2.07
SGD1YLR336C RBA50Q04418 439 aa2.11□□□□□ -2.07
SGD1YLR336C RBS1Q05672 457 aaKnown RBP2.11□□□□□ -2.07
SGD1YLR336C SEC39Q12745 709 aa2.11□□□□□ -2.07
SGD1YLR336C SUC2P00724 532 aa2.1□□□□□ -2.07
SGD1YLR336C GLN3P18494 730 aa2.1□□□□□ -2.07
SGD1YLR336C PPZ1P26570 692 aa2.1□□□□□ -2.07
SGD1YLR336C NPL6P32832 435 aa2.1□□□□□ -2.07
SGD1YLR336C MSN2P33748 704 aa2.1□□□□□ -2.07
SGD1YLR336C SEC66P33754 206 aa2.1□□□□□ -2.07
SGD1YLR336C SHP1P34223 423 aa2.1□□□□□ -2.07
SGD1YLR336C UTP9P38882 575 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C YMR147WP40218 223 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C GPD2P41911 440 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C TDA7P53882 636 aaPredicted RBP2.1□□□□□ -2.07
SGD1YLR336C KTR5P53966 522 aaPredicted RBP2.1□□□□□ -2.07
SGD1YLR336C SLG1P54867 378 aa2.1□□□□□ -2.07
SGD1YLR336C MSS11Q03825 758 aa2.1□□□□□ -2.07
SGD1YLR336C YDR415CQ04033 374 aaPredicted RBP2.1□□□□□ -2.07
SGD1YLR336C THI20Q08224 551 aa2.1□□□□□ -2.07
SGD1YLR336C CSR2Q12734 1121 aa2.1□□□□□ -2.07
SGD1YLR336C RPL31BP0C2H9 113 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C TYR1P20049 452 aa2.1□□□□□ -2.07
SGD1YLR336C SEC1P30619 724 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C ERG1P32476 496 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C DUG2P38149 878 aa2.1□□□□□ -2.07
SGD1YLR336C VMA13P41807 478 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C ATG27P46989 271 aa2.1□□□□□ -2.07
SGD1YLR336C SAM50P53969 484 aa2.1□□□□□ -2.07
SGD1YLR336C FMP42Q04991 504 aa2.1□□□□□ -2.07
SGD1YLR336C RQC1Q05468 723 aaKnown RBP2.1□□□□□ -2.07
SGD1YLR336C ARP6Q12509 438 aa2.1□□□□□ -2.07
SGD1YLR336C CDC23P16522 626 aa2.09□□□□□ -2.07
SGD1YLR336C FUR1P18562 216 aaKnown RBP2.09□□□□□ -2.07
SGD1YLR336C SUI2P20459 304 aaKnown RBP2.09□□□□□ -2.07
SGD1YLR336C BYE1P36106 594 aa2.09□□□□□ -2.07
SGD1YLR336C BNA4P38169 460 aa2.09□□□□□ -2.07
SGD1YLR336C YIR014WP40570 242 aa2.09□□□□□ -2.07
SGD1YLR336C HXT14P42833 540 aa2.09□□□□□ -2.07
SGD1YLR336C VTC2P43585 828 aa2.09□□□□□ -2.07
SGD1YLR336C ALK1P43633 760 aaKnown RBP2.09□□□□□ -2.07
SGD1YLR336C ZPR1P53303 486 aaKnown RBP2.09□□□□□ -2.07
SGD1YLR336C SEC5P89102 971 aa2.09□□□□□ -2.07
SGD1YLR336C RPA49Q01080 415 aaPredicted RBP2.09□□□□□ -2.07
SGD1YLR336C YLR352WQ06479 807 aa2.09□□□□□ -2.07
SGD1YLR336C RRD2Q12461 358 aa2.09□□□□□ -2.07
SGD1YLR336C APE1P14904 514 aa2.09□□□□□ -2.08
SGD1YLR336C RPN2P32565 945 aaKnown RBP2.09□□□□□ -2.08
SGD1YLR336C OSH3P38713 996 aaKnown RBP2.09□□□□□ -2.08
SGD1YLR336C VPS52P39904 641 aa2.09□□□□□ -2.08
SGD1YLR336C SCD6P45978 349 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08 RIP-Chip
SGD1YLR336C SLD5Q03406 294 aa2.09□□□□□ -2.08
SGD1YLR336C ISN1Q99312 450 aa2.09□□□□□ -2.08
SGD1YLR336C YML133CQ03099 1374 aa2.08□□□□□ -2.08
SGD1YLR336C YLL067CQ07888 1374 aa2.08□□□□□ -2.08
SGD1YLR336C YLL066CQ99208 1374 aa2.08□□□□□ -2.08
SGD1YLR336C MES1P00958 751 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C HXT3P32466 567 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C ECM15P35195 104 aa2.08□□□□□ -2.08
SGD1YLR336C MIC60P36112 540 aa2.08□□□□□ -2.08
SGD1YLR336C RKM3P38222 552 aa2.08□□□□□ -2.08
SGD1YLR336C LSC1P53598 329 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C ARX1Q03862 593 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C GLO2Q05584 274 aa2.08□□□□□ -2.08
SGD1YLR336C PHO92Q06390 306 aa2.08□□□□□ -2.08
SGD1YLR336C RKM5Q12367 367 aa2.08□□□□□ -2.08
SGD1YLR336C MRS3P10566 314 aa2.08□□□□□ -2.08
SGD1YLR336C AMD1P15274 810 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C BUD14P27637 709 aa2.08□□□□□ -2.08
SGD1YLR336C PAP1P29468 568 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C NFU1P32860 256 aa2.08□□□□□ -2.08
SGD1YLR336C TRS65P32893 560 aa2.08□□□□□ -2.08
SGD1YLR336C SYG1P40528 902 aa2.08□□□□□ -2.08
SGD1YLR336C SNM1P40993 198 aa2.08□□□□□ -2.08
SGD1YLR336C ALT2P52892 507 aa2.08□□□□□ -2.08
SGD1YLR336C YGL108CP53139 140 aa2.08□□□□□ -2.08
SGD1YLR336C RLI1Q03195 608 aaKnown RBP2.08□□□□□ -2.08
SGD1YLR336C RAV1P47104 1357 aa2.07□□□□□ -2.08
SGD1YLR336C RPL3P14126 387 aaKnown RBP2.07□□□□□ -2.08
SGD1YLR336C SEC62P21825 274 aa2.07□□□□□ -2.08
SGD1YLR336C PPH22P23595 377 aa2.07□□□□□ -2.08
SGD1YLR336C SPB1P25582 841 aaPredicted RBP2.07□□□□□ -2.08
SGD1YLR336C ATS1P31386 333 aa2.07□□□□□ -2.08
SGD1YLR336C ATP11P32453 318 aa2.07□□□□□ -2.08
SGD1YLR336C UTR4P32626 227 aa2.07□□□□□ -2.08
SGD1YLR336C VPS17P32913 551 aa2.07□□□□□ -2.08
SGD1YLR336C CSM2P40465 213 aa2.07□□□□□ -2.08
SGD1YLR336C NUP53Q03790 475 aa2.07□□□□□ -2.08
SGD1YLR336C BNA5Q05979 453 aa2.07□□□□□ -2.08
SGD1YLR336C RPC53P25441 422 aa2.07□□□□□ -2.08
SGD1YLR336C YCR022CP25620 114 aa2.07□□□□□ -2.08
SGD1YLR336C FRE1P32791 686 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms