RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C CPR3P25719 182 aa3.79□□□□□ -1.8
SMD3YLR147C ROK1P45818 564 aaPredicted RBP3.79□□□□□ -1.8
SMD3YLR147C TLG2Q08144 397 aa3.79□□□□□ -1.8
SMD3YLR147C ENT1Q12518 454 aa3.79□□□□□ -1.8
SMD3YLR147C YJR112W-AQ3E743 109 aa3.79□□□□□ -1.8
SMD3YLR147C SUI2P20459 304 aaKnown RBP3.78□□□□□ -1.8
SMD3YLR147C OLE1P21147 510 aaKnown RBP3.78□□□□□ -1.8
SMD3YLR147C YCR007CP25354 239 aa3.78□□□□□ -1.8
SMD3YLR147C FRE1P32791 686 aa3.78□□□□□ -1.8
SMD3YLR147C SEF1P34228 1148 aa3.78□□□□□ -1.8
SMD3YLR147C ALG5P40350 334 aa3.78□□□□□ -1.8
SMD3YLR147C AIM22P47051 409 aa3.78□□□□□ -1.8
SMD3YLR147C MRX6P48564 524 aa3.78□□□□□ -1.8
SMD3YLR147C IMD4P50094 524 aaKnown RBP3.78□□□□□ -1.8
SMD3YLR147C HEM2P05373 342 aa3.77□□□□□ -1.81
SMD3YLR147C MSN2P33748 704 aa3.77□□□□□ -1.81
SMD3YLR147C YOX1P34161 385 aa3.77□□□□□ -1.81
SMD3YLR147C SHP1P34223 423 aa3.77□□□□□ -1.81
SMD3YLR147C TCD2P36101 447 aaKnown RBP3.77□□□□□ -1.81
SMD3YLR147C NOP4P37838 685 aaKnown RBP3.77□□□□□ -1.81
SMD3YLR147C DUG2P38149 878 aa3.77□□□□□ -1.81
SMD3YLR147C TCM62P38228 572 aaKnown RBP3.77□□□□□ -1.81
SMD3YLR147C TIF4631P39935 952 aaKnown RBP3.77□□□□□ -1.81
SMD3YLR147C VID30P53076 958 aa3.77□□□□□ -1.81
SMD3YLR147C BOR1P53838 576 aa3.77□□□□□ -1.81
SMD3YLR147C TOF2Q02208 771 aa3.77□□□□□ -1.81
SMD3YLR147C MRPL51Q06090 140 aaPredicted RBP3.77□□□□□ -1.81
SMD3YLR147C CTI6Q08923 506 aa3.77□□□□□ -1.81
SMD3YLR147C RLM1Q12224 676 aa3.77□□□□□ -1.81
SMD3YLR147C CYB2P00175 591 aa3.76□□□□□ -1.81
SMD3YLR147C CAR1P00812 333 aaKnown RBP3.76□□□□□ -1.81
SMD3YLR147C RPL20AP0CX23 172 aaKnown RBP3.76□□□□□ -1.81
SMD3YLR147C RPL20BP0CX24 172 aaPredicted RBP3.76□□□□□ -1.81
SMD3YLR147C UTR4P32626 227 aa3.76□□□□□ -1.81
SMD3YLR147C TIF5P38431 405 aaKnown RBP3.76□□□□□ -1.81
SMD3YLR147C MSR1P38714 643 aa3.76□□□□□ -1.81
SMD3YLR147C ALK1P43633 760 aaKnown RBP3.76□□□□□ -1.81
SMD3YLR147C IVY1Q04934 453 aa3.76□□□□□ -1.81
SMD3YLR147C PHO92Q06390 306 aa3.76□□□□□ -1.81
SMD3YLR147C THP1Q08231 455 aa3.76□□□□□ -1.81
SMD3YLR147C PRP2P20095 876 aaPredicted RBP3.75□□□□□ -1.81
SMD3YLR147C PRD1P25375 712 aa3.75□□□□□ -1.81
SMD3YLR147C PMU1P36069 295 aa3.75□□□□□ -1.81
SMD3YLR147C NPR2P39923 615 aa3.75□□□□□ -1.81
SMD3YLR147C RCN2Q12044 265 aa3.75□□□□□ -1.81
SMD3YLR147C GFD2P25370 566 aaKnown RBP3.74□□□□□ -1.81
SMD3YLR147C BNA4P38169 460 aa3.74□□□□□ -1.81
SMD3YLR147C AVT5P38176 459 aa3.74□□□□□ -1.81
SMD3YLR147C MUM2P38236 366 aa3.74□□□□□ -1.81
SMD3YLR147C PCA1P38360 1216 aa3.74□□□□□ -1.81
SMD3YLR147C HAT2P39984 401 aa3.74□□□□□ -1.81
SMD3YLR147C SHO1P40073 367 aa3.74□□□□□ -1.81
SMD3YLR147C VPS75P53853 264 aa3.74□□□□□ -1.81
SMD3YLR147C HEF3P53978 1044 aaKnown RBP3.74□□□□□ -1.81
SMD3YLR147C VPS38Q05919 439 aa3.74□□□□□ -1.81
SMD3YLR147C YLL056CQ12177 298 aa3.74□□□□□ -1.81
SMD3YLR147C LSP1Q12230 341 aaKnown RBP3.74□□□□□ -1.81
SMD3YLR147C GAL80P04387 435 aa3.73□□□□□ -1.81
SMD3YLR147C ATR1P13090 542 aa3.73□□□□□ -1.81
SMD3YLR147C CBS1P14066 229 aa3.73□□□□□ -1.81
SMD3YLR147C CBS2P14905 389 aa3.73□□□□□ -1.81
SMD3YLR147C WBP1P33767 430 aaKnown RBP3.73□□□□□ -1.81
SMD3YLR147C ALG8P40351 577 aa3.73□□□□□ -1.81
SMD3YLR147C TMA108P40462 946 aa3.73□□□□□ -1.81
SMD3YLR147C IDP2P41939 412 aa3.73□□□□□ -1.81
SMD3YLR147C ZPR1P53303 486 aaKnown RBP3.73□□□□□ -1.81
SMD3YLR147C ARE2P53629 642 aaKnown RBP3.73□□□□□ -1.81
SMD3YLR147C IRC15Q02733 499 aa3.73□□□□□ -1.81
SMD3YLR147C FIN1Q03898 291 aa3.73□□□□□ -1.81
SMD3YLR147C VPS74Q06385 345 aa3.73□□□□□ -1.81
SMD3YLR147C IMH1Q06704 911 aaKnown RBP3.73□□□□□ -1.81
SMD3YLR147C CFT2Q12102 859 aaPredicted RBP3.73□□□□□ -1.81
SMD3YLR147C AVL9Q12500 764 aa3.73□□□□□ -1.81
SMD3YLR147C RNA14P25298 677 aaKnown RBP3.72□□□□□ -1.81
SMD3YLR147C TUL1P36096 758 aa3.72□□□□□ -1.81
SMD3YLR147C YBR139WP38109 508 aa3.72□□□□□ -1.81
SMD3YLR147C REG2P38232 338 aa3.72□□□□□ -1.81
SMD3YLR147C KEL1P38853 1164 aaKnown RBP3.72□□□□□ -1.81
SMD3YLR147C YJL132WP47014 750 aa3.72□□□□□ -1.81
SMD3YLR147C YGR066CP53242 292 aa3.72□□□□□ -1.81
SMD3YLR147C GPI1P53306 609 aa3.72□□□□□ -1.81
SMD3YLR147C RBS1Q05672 457 aaKnown RBP3.72□□□□□ -1.81
SMD3YLR147C RSA1Q08932 381 aa3.72□□□□□ -1.81
SMD3YLR147C KEL3Q08979 651 aaPredicted RBP3.72□□□□□ -1.81
SMD3YLR147C CTF3Q12748 733 aa3.72□□□□□ -1.81
SMD3YLR147C COR1P07256 457 aa3.71□□□□□ -1.82
SMD3YLR147C MET8P15807 274 aa3.71□□□□□ -1.82
SMD3YLR147C GLK1P17709 500 aaKnown RBP3.71□□□□□ -1.82
SMD3YLR147C PEP3P27801 918 aa3.71□□□□□ -1.82
SMD3YLR147C IMP2'P32351 346 aa3.71□□□□□ -1.82
SMD3YLR147C MRE11P32829 692 aa3.71□□□□□ -1.82
SMD3YLR147C SRO77P38163 1010 aa3.71□□□□□ -1.82
SMD3YLR147C YBR225WP38321 900 aa3.71□□□□□ -1.82
SMD3YLR147C MET28P40573 187 aa3.71□□□□□ -1.82
SMD3YLR147C WSC2P53832 503 aa3.71□□□□□ -1.82
SMD3YLR147C RKM5Q12367 367 aa3.71□□□□□ -1.82
SMD3YLR147C YCL021W-AQ96VH3 125 aa3.71□□□□□ -1.82
SMD3YLR147C DFR1P07807 211 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SMD3YLR147C PMR1P13586 950 aa3.7□□□□□ -1.82
SMD3YLR147C PUT3P25502 979 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms