RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C MTF1P14908 341 aaKnown RBP4.52□□□□□ -1.69
SED5YLR026C MCK1P21965 375 aaKnown RBP4.52□□□□□ -1.69
SED5YLR026C SAN1P22470 610 aa4.52□□□□□ -1.69
SED5YLR026C BUD5P25300 642 aaPredicted RBP4.52□□□□□ -1.69
SED5YLR026C ARC1P46672 376 aaKnown RBP4.52□□□□□ -1.69
SED5YLR026C BUD32P53323 261 aa4.52□□□□□ -1.69
SED5YLR026C BSC5P53755 489 aa4.52□□□□□ -1.69
SED5YLR026C EFM6P53970 246 aa4.52□□□□□ -1.69
SED5YLR026C YSA1Q01976 231 aa4.52□□□□□ -1.69
SED5YLR026C IOC4Q04213 475 aa4.52□□□□□ -1.69
SED5YLR026C USO1P25386 1790 aa4.52□□□□□ -1.69
SED5YLR026C IQG1Q12280 1495 aa4.51□□□□□ -1.69
SED5YLR026C ARD1P07347 238 aaPredicted RBP4.51□□□□□ -1.69
SED5YLR026C APE1P14904 514 aa4.51□□□□□ -1.69
SED5YLR026C PUP3P25451 205 aaKnown RBP4.51□□□□□ -1.69
SED5YLR026C YBL055CP34220 418 aaPredicted RBP4.51□□□□□ -1.69
SED5YLR026C NUP133P36161 1157 aa4.51□□□□□ -1.69
SED5YLR026C AVT5P38176 459 aa4.51□□□□□ -1.69
SED5YLR026C ICS2P38284 255 aa4.51□□□□□ -1.69
SED5YLR026C MTC4P38335 694 aaKnown RBP4.51□□□□□ -1.69
SED5YLR026C SNG1P46950 547 aa4.51□□□□□ -1.69
SED5YLR026C COS10P52924 374 aa4.51□□□□□ -1.69
SED5YLR026C RLI1Q03195 608 aaKnown RBP4.51□□□□□ -1.69
SED5YLR026C TLG2Q08144 397 aa4.51□□□□□ -1.69
SED5YLR026C PDR15Q04182 1529 aaKnown RBP4.51□□□□□ -1.69
SED5YLR026C GDB1Q06625 1536 aa4.51□□□□□ -1.69
SED5YLR026C BUD3P25558 1636 aa4.5□□□□□ -1.69
SED5YLR026C PRE8P23639 250 aa4.5□□□□□ -1.69
SED5YLR026C RER1P25560 188 aa4.5□□□□□ -1.69
SED5YLR026C IMG1P25626 169 aa4.5□□□□□ -1.69
SED5YLR026C SPC110P32380 944 aa4.5□□□□□ -1.69
SED5YLR026C AUR1P36107 401 aaPredicted RBP4.5□□□□□ -1.69
SED5YLR026C RPL32P38061 130 aaKnown RBP4.5□□□□□ -1.69
SED5YLR026C SHR3Q02774 210 aa4.5□□□□□ -1.69
SED5YLR026C MSC1Q03104 513 aa4.5□□□□□ -1.69
SED5YLR026C ERP1Q05359 219 aaKnown RBP4.5□□□□□ -1.69
SED5YLR026C AYT1Q12226 474 aa4.5□□□□□ -1.69
SED5YLR026C PDR12Q02785 1511 aa4.5□□□□□ -1.69
SED5YLR026C ARO1P08566 1588 aaKnown RBP4.49□□□□□ -1.69
SED5YLR026C CBS2P14905 389 aa4.49□□□□□ -1.69
SED5YLR026C OSH3P38713 996 aaKnown RBP4.49□□□□□ -1.69
SED5YLR026C CSM2P40465 213 aa4.49□□□□□ -1.69
SED5YLR026C LCL3P53153 274 aa4.49□□□□□ -1.69
SED5YLR026C BOR1P53838 576 aa4.49□□□□□ -1.69
SED5YLR026C YLL056CQ12177 298 aa4.49□□□□□ -1.69
SED5YLR026C PEP5P12868 1029 aa4.48□□□□□ -1.69
SED5YLR026C BOS1P25385 244 aa4.48□□□□□ -1.69
SED5YLR026C SGF29P25554 259 aa4.48□□□□□ -1.69
SED5YLR026C YCR022CP25620 114 aa4.48□□□□□ -1.69
SED5YLR026C UBP11P36026 717 aa4.48□□□□□ -1.69
SED5YLR026C DSD1P53095 428 aa4.48□□□□□ -1.69
SED5YLR026C YGR127WP53275 312 aa4.48□□□□□ -1.69
SED5YLR026C BUD22Q04347 519 aaKnown RBP4.48□□□□□ -1.69
SED5YLR026C ETT1Q08421 412 aaKnown RBP4.48□□□□□ -1.69
SED5YLR026C YPL272CQ08984 517 aa4.48□□□□□ -1.69
SED5YLR026C HEM2P05373 342 aa4.47□□□□□ -1.69
SED5YLR026C RPL20AP0CX23 172 aaKnown RBP4.47□□□□□ -1.69
SED5YLR026C RPL20BP0CX24 172 aaPredicted RBP4.47□□□□□ -1.69
SED5YLR026C KAR3P17119 729 aa4.47□□□□□ -1.69
SED5YLR026C TRX2P22803 104 aaKnown RBP4.47□□□□□ -1.69
SED5YLR026C POL4P25615 582 aa4.47□□□□□ -1.69
SED5YLR026C YKL023WP36103 277 aaKnown RBP4.47□□□□□ -1.69
SED5YLR026C PCA1P38360 1216 aa4.47□□□□□ -1.69
SED5YLR026C AFG3P39925 761 aa4.47□□□□□ -1.69
SED5YLR026C LYS14P40971 790 aa4.47□□□□□ -1.69
SED5YLR026C FAR3P46671 204 aa4.47□□□□□ -1.69
SED5YLR026C YML037CQ03703 340 aa4.47□□□□□ -1.69
SED5YLR026C YDL057WQ07379 328 aa4.47□□□□□ -1.69
SED5YLR026C LUC7Q07508 261 aaPredicted RBP4.47□□□□□ -1.69
SED5YLR026C SDH5Q08230 162 aa4.47□□□□□ -1.69
SED5YLR026C NCE102Q12207 173 aaRIP-Chip data4.47□□□□□ -1.69not detected
SED5YLR026C CAR1P00812 333 aaKnown RBP4.46□□□□□ -1.7
SED5YLR026C MF(ALPHA)1P01149 165 aa4.46□□□□□ -1.7
SED5YLR026C SSE2P32590 693 aaKnown RBP4.46□□□□□ -1.7
SED5YLR026C YBR144CP34215 104 aa4.46□□□□□ -1.7
SED5YLR026C NPR2P39923 615 aa4.46□□□□□ -1.7
SED5YLR026C SCD6P45978 349 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7 RIP-Chip
SED5YLR026C DRN1P53255 507 aaKnown RBP4.46□□□□□ -1.7
SED5YLR026C YGR126WP53274 230 aa4.46□□□□□ -1.7
SED5YLR026C SPE4Q12455 300 aa4.46□□□□□ -1.7
SED5YLR026C STH1P32597 1359 aa4.45□□□□□ -1.7
SED5YLR026C NUP157P40064 1391 aaKnown RBP4.45□□□□□ -1.7
SED5YLR026C YCK1P23291 538 aa4.45□□□□□ -1.7
SED5YLR026C APT1P49435 187 aaKnown RBP4.45□□□□□ -1.7
SED5YLR026C RTS3P53289 263 aa4.45□□□□□ -1.7
SED5YLR026C MEP3P53390 489 aa4.45□□□□□ -1.7
SED5YLR026C SYO1Q07395 620 aa4.45□□□□□ -1.7
SED5YLR026C RPL19AP0CX82 189 aaKnown RBP4.44□□□□□ -1.7
SED5YLR026C RPL19BP0CX83 189 aaPredicted RBP4.44□□□□□ -1.7
SED5YLR026C AMD1P15274 810 aaKnown RBP4.44□□□□□ -1.7
SED5YLR026C YIH1P25637 258 aa4.44□□□□□ -1.7
SED5YLR026C CHS3P29465 1165 aa4.44□□□□□ -1.7
SED5YLR026C FRE1P32791 686 aa4.44□□□□□ -1.7
SED5YLR026C ALT2P52892 507 aa4.44□□□□□ -1.7
SED5YLR026C MRP13P12686 339 aa4.43□□□□□ -1.7
SED5YLR026C SPG5P42933 373 aa4.43□□□□□ -1.7
SED5YLR026C WSC2P53832 503 aa4.43□□□□□ -1.7
SED5YLR026C SLD5Q03406 294 aa4.43□□□□□ -1.7
SED5YLR026C SMA2Q04658 369 aa4.43□□□□□ -1.7
SED5YLR026C YDL009CQ12210 107 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms