RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W YSW1P38280 609 aa4.44□□□□□ -1.7
NSE1YLR007W APD1P38281 316 aa4.44□□□□□ -1.7
NSE1YLR007W ARP1P38696 384 aa4.44□□□□□ -1.7
NSE1YLR007W CTM1P38818 585 aa4.44□□□□□ -1.7
NSE1YLR007W ALK1P43633 760 aaKnown RBP4.44□□□□□ -1.7
NSE1YLR007W RPN14P53196 417 aa4.44□□□□□ -1.7
NSE1YLR007W YTP1P53584 459 aa4.44□□□□□ -1.7
NSE1YLR007W YNL144CP53907 740 aa4.44□□□□□ -1.7
NSE1YLR007W EGD1Q02642 157 aaKnown RBP4.44□□□□□ -1.7
NSE1YLR007W PPM1Q04081 328 aa4.44□□□□□ -1.7
NSE1YLR007W BUD22Q04347 519 aaKnown RBP4.44□□□□□ -1.7
NSE1YLR007W VPS38Q05919 439 aa4.44□□□□□ -1.7
NSE1YLR007W PDR8Q06149 701 aa4.44□□□□□ -1.7
NSE1YLR007W AFT2Q08957 416 aa4.44□□□□□ -1.7
NSE1YLR007W YML133CQ03099 1374 aa4.43□□□□□ -1.7
NSE1YLR007W YLL067CQ07888 1374 aa4.43□□□□□ -1.7
NSE1YLR007W YLL066CQ99208 1374 aa4.43□□□□□ -1.7
NSE1YLR007W YBR085C-AO43137 85 aa4.43□□□□□ -1.7
NSE1YLR007W RPL3P14126 387 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W PET123P17558 318 aa4.43□□□□□ -1.7
NSE1YLR007W DBP3P20447 523 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W CDC15P27636 974 aa4.43□□□□□ -1.7
NSE1YLR007W RRP1P35178 278 aaPredicted RBP4.43□□□□□ -1.7
NSE1YLR007W AGP2P38090 596 aa4.43□□□□□ -1.7
NSE1YLR007W SEC31P38968 1273 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W XBP1P40489 647 aa4.43□□□□□ -1.7
NSE1YLR007W CHS6P40955 746 aa4.43□□□□□ -1.7
NSE1YLR007W IRC7P43623 340 aa4.43□□□□□ -1.7
NSE1YLR007W DLD2P46681 530 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W LIA1P47120 325 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W VID30P53076 958 aa4.43□□□□□ -1.7
NSE1YLR007W DCP2P53550 970 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W EAF7P53911 425 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W AQR1P53943 586 aa4.43□□□□□ -1.7
NSE1YLR007W ASI1P54074 624 aa4.43□□□□□ -1.7
NSE1YLR007W PFA5Q03289 374 aa4.43□□□□□ -1.7
NSE1YLR007W MRPL1Q04599 285 aa4.43□□□□□ -1.7
NSE1YLR007W RQC1Q05468 723 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W ATG38Q05789 226 aaKnown RBP4.43□□□□□ -1.7
NSE1YLR007W YLR455WQ06188 304 aa4.43□□□□□ -1.7
NSE1YLR007W RTT109Q07794 436 aa4.43□□□□□ -1.7
NSE1YLR007W CLP1Q08685 445 aaPredicted RBP4.43□□□□□ -1.7
NSE1YLR007W BUD7Q08754 746 aa4.43□□□□□ -1.7
NSE1YLR007W VPS54Q12071 889 aa4.43□□□□□ -1.7
NSE1YLR007W TFB5Q3E7C1 72 aaPredicted RBP4.43□□□□□ -1.7
NSE1YLR007W YPT6Q99260 215 aa4.43□□□□□ -1.7
NSE1YLR007W YLR278CQ05854 1341 aa4.43□□□□□ -1.7
NSE1YLR007W KRS1P15180 591 aaKnown RBP4.42□□□□□ -1.7
NSE1YLR007W YAP1P19880 650 aaKnown RBP4.42□□□□□ -1.7
NSE1YLR007W YIH1P25637 258 aa4.42□□□□□ -1.7
NSE1YLR007W PMT1P33775 817 aa4.42□□□□□ -1.7
NSE1YLR007W COY1P34237 679 aa4.42□□□□□ -1.7
NSE1YLR007W CMC1P36064 111 aa4.42□□□□□ -1.7
NSE1YLR007W RRT2P38332 387 aa4.42□□□□□ -1.7
NSE1YLR007W FLO5P38894 1075 aa4.42□□□□□ -1.7
NSE1YLR007W MAF1P41910 395 aa4.42□□□□□ -1.7
NSE1YLR007W YJL107CP42947 387 aa4.42□□□□□ -1.7
NSE1YLR007W MLC1P53141 149 aa4.42□□□□□ -1.7
NSE1YLR007W YGR266WP53326 701 aa4.42□□□□□ -1.7
NSE1YLR007W SOV1Q04748 898 aa4.42□□□□□ -1.7
NSE1YLR007W MRD1Q06106 887 aaKnown RBP4.42□□□□□ -1.7
NSE1YLR007W VTA1Q06263 330 aa4.42□□□□□ -1.7
NSE1YLR007W YPL272CQ08984 517 aa4.42□□□□□ -1.7
NSE1YLR007W AVL9Q12500 764 aa4.42□□□□□ -1.7
NSE1YLR007W GAL80P04387 435 aa4.41□□□□□ -1.7
NSE1YLR007W KGD1P20967 1014 aaKnown RBP4.41□□□□□ -1.7
NSE1YLR007W COQ3P27680 312 aa4.41□□□□□ -1.7
NSE1YLR007W HCS1P34243 683 aa4.41□□□□□ -1.7
NSE1YLR007W ARN1P38731 627 aa4.41□□□□□ -1.7
NSE1YLR007W ASG1P40467 964 aa4.41□□□□□ -1.7
NSE1YLR007W SGN1P40561 250 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
NSE1YLR007W HXT14P42833 540 aa4.41□□□□□ -1.7
NSE1YLR007W CTK2P46962 323 aa4.41□□□□□ -1.7
NSE1YLR007W PET130P47065 347 aa4.41□□□□□ -1.7
NSE1YLR007W ORC5P50874 479 aa4.41□□□□□ -1.7
NSE1YLR007W TWF1P53250 332 aa4.41□□□□□ -1.7
NSE1YLR007W LSB1P53281 241 aa4.41□□□□□ -1.7
NSE1YLR007W COP1P53622 1201 aaKnown RBP4.41□□□□□ -1.7
NSE1YLR007W RHO5P53879 331 aaKnown RBP4.41□□□□□ -1.7
NSE1YLR007W RPA49Q01080 415 aaPredicted RBP4.41□□□□□ -1.7
NSE1YLR007W PIG1Q06216 648 aa4.41□□□□□ -1.7
NSE1YLR007W CRC1Q12289 327 aa4.41□□□□□ -1.7
NSE1YLR007W NBL1Q3E7Y6 73 aa4.41□□□□□ -1.7
NSE1YLR007W ISN1Q99312 450 aa4.41□□□□□ -1.7
NSE1YLR007W YPT1P01123 206 aaKnown RBP4.4□□□□□ -1.71
NSE1YLR007W YER190C-BP0CX94 160 aa4.4□□□□□ -1.71
NSE1YLR007W YEL077W-AP0CX95 160 aa4.4□□□□□ -1.71
NSE1YLR007W YGR296C-BP0CX96 160 aa4.4□□□□□ -1.71
NSE1YLR007W YPL283W-BP0CX97 160 aa4.4□□□□□ -1.71
NSE1YLR007W YPR204C-AP0CX98 160 aa4.4□□□□□ -1.71
NSE1YLR007W TAL1P15019 335 aaKnown RBP4.4□□□□□ -1.71
NSE1YLR007W TKL1P23254 680 aaKnown RBP4.4□□□□□ -1.71
NSE1YLR007W SOF1P33750 489 aaKnown RBP4.4□□□□□ -1.71
NSE1YLR007W OCT1P35999 772 aa4.4□□□□□ -1.71
NSE1YLR007W LHS1P36016 881 aa4.4□□□□□ -1.71
NSE1YLR007W SLM4P38247 162 aa4.4□□□□□ -1.71
NSE1YLR007W BUR6P40096 142 aa4.4□□□□□ -1.71
NSE1YLR007W YTA12P40341 825 aa4.4□□□□□ -1.71
NSE1YLR007W RRP46P53256 223 aaPredicted RBP4.4□□□□□ -1.71
NSE1YLR007W IDP3P53982 420 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms