RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YHR202WP38887 602 aa5.72□□□□□ -1.49
SSK1YLR006C YEL057CP39983 233 aa5.72□□□□□ -1.49
SSK1YLR006C CAF16P43569 289 aa5.72□□□□□ -1.49
SSK1YLR006C DUO1P53168 247 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C SQS1P53866 767 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C ADE12P80210 433 aaKnown RBP5.72□□□□□ -1.49
SSK1YLR006C YMR209CQ03648 457 aa5.72□□□□□ -1.49
SSK1YLR006C YET2Q04210 160 aa5.72□□□□□ -1.49
SSK1YLR006C HDA3Q06623 655 aa5.72□□□□□ -1.49
SSK1YLR006C AIM39Q08223 395 aa5.72□□□□□ -1.49
SSK1YLR006C IMA2Q08295 589 aa5.72□□□□□ -1.49
SSK1YLR006C MRPL23Q12487 163 aaPredicted RBP5.72□□□□□ -1.49
SSK1YLR006C STE6P12866 1290 aa5.71□□□□□ -1.5
SSK1YLR006C EST1P17214 699 aaPredicted RBP5.71□□□□□ -1.5
SSK1YLR006C TYR1P20049 452 aa5.71□□□□□ -1.5
SSK1YLR006C BUD5P25300 642 aaPredicted RBP5.71□□□□□ -1.5
SSK1YLR006C PER1P25625 357 aa5.71□□□□□ -1.5
SSK1YLR006C NGG1P32494 702 aa5.71□□□□□ -1.5
SSK1YLR006C CYM1P32898 989 aa5.71□□□□□ -1.5
SSK1YLR006C SKG6P32900 734 aaPredicted RBP5.71□□□□□ -1.5
SSK1YLR006C KES1P35844 434 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C MAP2P38174 421 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C FAT1P38225 669 aa5.71□□□□□ -1.5
SSK1YLR006C SSP120P39931 234 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C EDC3P39998 551 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C HAM1P47119 197 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C RPS7BP48164 190 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C SLU7Q02775 382 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C ARO80Q04052 950 aa5.71□□□□□ -1.5
SSK1YLR006C YLR413WQ06689 675 aa5.71□□□□□ -1.5
SSK1YLR006C YPR027CQ12079 277 aa5.71□□□□□ -1.5
SSK1YLR006C YLL056CQ12177 298 aa5.71□□□□□ -1.5
SSK1YLR006C HOS1Q12214 470 aa5.71□□□□□ -1.5
SSK1YLR006C NOT5Q12514 560 aaPredicted RBP5.71□□□□□ -1.5
SSK1YLR006C GPA2P10823 449 aa5.71□□□□□ -1.5
SSK1YLR006C MDH1P17505 334 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SSK1YLR006C PRP2P20095 876 aaPredicted RBP5.71□□□□□ -1.5
SSK1YLR006C YCR015CP25616 317 aa5.71□□□□□ -1.5
SSK1YLR006C URA10P30402 227 aa5.71□□□□□ -1.5
SSK1YLR006C SUA5P32579 426 aa5.71□□□□□ -1.5
SSK1YLR006C SIP2P34164 415 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C CTF13P35203 478 aa5.71□□□□□ -1.5
SSK1YLR006C AVT2P39981 480 aa5.71□□□□□ -1.5
SSK1YLR006C DIM1P41819 318 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C YFL012WP43580 148 aa5.71□□□□□ -1.5
SSK1YLR006C COG2P53271 262 aa5.71□□□□□ -1.5
SSK1YLR006C PXR1P53335 271 aaPredicted RBP5.71□□□□□ -1.5
SSK1YLR006C SRL4Q03085 281 aa5.71□□□□□ -1.5
SSK1YLR006C HMO1Q03973 246 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C SEC10Q06245 871 aa5.71□□□□□ -1.5
SSK1YLR006C APC9Q12107 265 aa5.71□□□□□ -1.5
SSK1YLR006C RPS21BQ3E754 87 aaKnown RBP5.71□□□□□ -1.5
SSK1YLR006C KIN2P13186 1147 aaKnown RBP5.7□□□□□ -1.5
SSK1YLR006C MRPL33P20084 86 aa5.7□□□□□ -1.5
SSK1YLR006C SDS22P36047 338 aa5.7□□□□□ -1.5
SSK1YLR006C SLM4P38247 162 aa5.7□□□□□ -1.5
SSK1YLR006C TSC10P38342 320 aa5.7□□□□□ -1.5
SSK1YLR006C DIA4P38705 446 aaPredicted RBP5.7□□□□□ -1.5
SSK1YLR006C VAB2P40003 282 aa5.7□□□□□ -1.5
SSK1YLR006C MND1P53102 219 aa5.7□□□□□ -1.5
SSK1YLR006C YGR127WP53275 312 aa5.7□□□□□ -1.5
SSK1YLR006C INA17Q02888 182 aa5.7□□□□□ -1.5
SSK1YLR006C YMR210WQ03649 449 aa5.7□□□□□ -1.5
SSK1YLR006C SPC2Q04969 178 aa5.7□□□□□ -1.5
SSK1YLR006C ERF2Q06551 359 aa5.7□□□□□ -1.5
SSK1YLR006C HFI1Q12060 488 aa5.7□□□□□ -1.5
SSK1YLR006C YDL109CQ12103 647 aa5.7□□□□□ -1.5
SSK1YLR006C LEU9Q12166 604 aaKnown RBP5.7□□□□□ -1.5
SSK1YLR006C KCS1Q12494 1050 aa5.7□□□□□ -1.5
SSK1YLR006C UBR2Q07963 1872 aa5.7□□□□□ -1.5
SSK1YLR006C RSR1P13856 272 aa5.69□□□□□ -1.5
SSK1YLR006C MSS116P15424 664 aaKnown RBP5.69□□□□□ -1.5
SSK1YLR006C VAC17P25591 423 aa5.69□□□□□ -1.5
SSK1YLR006C ERV1P27882 189 aa5.69□□□□□ -1.5
SSK1YLR006C PRR1P28708 518 aa5.69□□□□□ -1.5
SSK1YLR006C SPR1P32603 445 aa5.69□□□□□ -1.5
SSK1YLR006C MAC1P35192 417 aa5.69□□□□□ -1.5
SSK1YLR006C PDX3P38075 228 aaKnown RBP5.69□□□□□ -1.5
SSK1YLR006C PCL6P40038 420 aa5.69□□□□□ -1.5
SSK1YLR006C MPH1P40562 993 aa5.69□□□□□ -1.5
SSK1YLR006C LOH1P47055 219 aa5.69□□□□□ -1.5
SSK1YLR006C PRM1P53835 661 aa5.69□□□□□ -1.5
SSK1YLR006C TVP15Q03860 143 aa5.69□□□□□ -1.5
SSK1YLR006C ARX1Q03862 593 aaKnown RBP5.69□□□□□ -1.5
SSK1YLR006C GRS2Q06817 618 aa5.69□□□□□ -1.5
SSK1YLR006C SNX3Q08826 162 aaKnown RBP5.69□□□□□ -1.5
SSK1YLR006C THI21Q08975 551 aa5.69□□□□□ -1.5
SSK1YLR006C DIN7Q12086 430 aa5.69□□□□□ -1.5
SSK1YLR006C SWT1Q12104 458 aa5.69□□□□□ -1.5
SSK1YLR006C APM4Q99186 491 aa5.69□□□□□ -1.5
SSK1YLR006C TUB1P09733 447 aaKnown RBP5.69□□□□□ -1.5
SSK1YLR006C URA4P20051 364 aa5.69□□□□□ -1.5
SSK1YLR006C MRPL8P22353 238 aa5.69□□□□□ -1.5
SSK1YLR006C ZIP1P31111 875 aa5.69□□□□□ -1.5
SSK1YLR006C IXR1P33417 597 aa5.69□□□□□ -1.5
SSK1YLR006C LRG1P35688 1017 aa5.69□□□□□ -1.5
SSK1YLR006C GPT2P36148 743 aa5.69□□□□□ -1.5
SSK1YLR006C APE3P37302 537 aaKnown RBP5.69□□□□□ -1.5
SSK1YLR006C RIM2P38127 377 aa5.69□□□□□ -1.5
SSK1YLR006C THI2P38141 450 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms