RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W BOS1P25385 244 aa3.53□□□□□ -1.84
SWD2YKL018W YCR051WP25631 222 aa3.53□□□□□ -1.84
SWD2YKL018W RPN2P32565 945 aaKnown RBP3.53□□□□□ -1.84
SWD2YKL018W MRE11P32829 692 aa3.53□□□□□ -1.84
SWD2YKL018W PMT1P33775 817 aa3.53□□□□□ -1.84
SWD2YKL018W YBL055CP34220 418 aaPredicted RBP3.53□□□□□ -1.84
SWD2YKL018W DBP8P38719 431 aa3.53□□□□□ -1.84
SWD2YKL018W LRP1P38801 184 aaKnown RBP3.53□□□□□ -1.84
SWD2YKL018W APE4P38821 490 aa3.53□□□□□ -1.84
SWD2YKL018W JEM1P40358 645 aa3.53□□□□□ -1.84
SWD2YKL018W IAH1P41734 238 aa3.53□□□□□ -1.84
SWD2YKL018W ATG27P46989 271 aa3.53□□□□□ -1.84
SWD2YKL018W MNP1P53163 194 aaPredicted RBP3.53□□□□□ -1.84
SWD2YKL018W SMA1Q02651 245 aa3.53□□□□□ -1.84
SWD2YKL018W YMR178WQ03219 274 aaKnown RBP3.53□□□□□ -1.84
SWD2YKL018W SCW10Q04951 389 aa3.53□□□□□ -1.84
SWD2YKL018W EDE1P34216 1381 aa3.52□□□□□ -1.85
SWD2YKL018W SPT7P35177 1332 aa3.52□□□□□ -1.85
SWD2YKL018W KRS1P15180 591 aaKnown RBP3.52□□□□□ -1.85
SWD2YKL018W SYN8P31377 255 aa3.52□□□□□ -1.85
SWD2YKL018W NUP133P36161 1157 aa3.52□□□□□ -1.85
SWD2YKL018W ZIM17P42844 174 aa3.52□□□□□ -1.85
SWD2YKL018W APT1P49435 187 aaKnown RBP3.52□□□□□ -1.85
SWD2YKL018W RPC11Q04307 110 aaPredicted RBP3.52□□□□□ -1.85
SWD2YKL018W EMI2Q04409 500 aaKnown RBP3.52□□□□□ -1.85
SWD2YKL018W YLR345WQ06137 509 aa3.52□□□□□ -1.85
SWD2YKL018W ECM30Q06673 1274 aa3.52□□□□□ -1.85
SWD2YKL018W SEC39Q12745 709 aa3.52□□□□□ -1.85
SWD2YKL018W ARG81P05085 880 aa3.51□□□□□ -1.85
SWD2YKL018W PRD1P25375 712 aa3.51□□□□□ -1.85
SWD2YKL018W VPH1P32563 840 aaKnown RBP3.51□□□□□ -1.85
SWD2YKL018W TFB1P32776 642 aa3.51□□□□□ -1.85
SWD2YKL018W YKL100CP34248 587 aa3.51□□□□□ -1.85
SWD2YKL018W TSC10P38342 320 aa3.51□□□□□ -1.85
SWD2YKL018W EFM2P38347 419 aa3.51□□□□□ -1.85
SWD2YKL018W ANS1P38832 159 aa3.51□□□□□ -1.85
SWD2YKL018W DLD2P46681 530 aaKnown RBP3.51□□□□□ -1.85
SWD2YKL018W ERG26P53199 349 aaKnown RBP3.51□□□□□ -1.85
SWD2YKL018W CUL3P53202 744 aa3.51□□□□□ -1.85
SWD2YKL018W YTP1P53584 459 aa3.51□□□□□ -1.85
SWD2YKL018W BNI5P53890 448 aaKnown RBP3.51□□□□□ -1.85
SWD2YKL018W EKI1Q03764 534 aa3.51□□□□□ -1.85
SWD2YKL018W PDS5Q04264 1277 aa3.51□□□□□ -1.85
SWD2YKL018W GYL1Q04322 720 aa3.51□□□□□ -1.85
SWD2YKL018W ETT1Q08421 412 aaKnown RBP3.51□□□□□ -1.85
SWD2YKL018W AFI1Q99222 893 aa3.51□□□□□ -1.85
SWD2YKL018W MDH1P17505 334 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SWD2YKL018W CLC1P17891 233 aa3.5□□□□□ -1.85
SWD2YKL018W PRO3P32263 286 aaKnown RBP3.5□□□□□ -1.85
SWD2YKL018W SEC66P33754 206 aa3.5□□□□□ -1.85
SWD2YKL018W RPL32P38061 130 aaKnown RBP3.5□□□□□ -1.85
SWD2YKL018W LEU5P38702 357 aa3.5□□□□□ -1.85
SWD2YKL018W MSR1P38714 643 aa3.5□□□□□ -1.85
SWD2YKL018W CIN4P39110 191 aa3.5□□□□□ -1.85
SWD2YKL018W YJL070CP40361 888 aa3.5□□□□□ -1.85
SWD2YKL018W LCB2P40970 561 aa3.5□□□□□ -1.85
SWD2YKL018W YJL055WP47044 245 aa3.5□□□□□ -1.85
SWD2YKL018W CAF130P53280 1122 aaPredicted RBP3.5□□□□□ -1.85
SWD2YKL018W VPS9P54787 451 aa3.5□□□□□ -1.85
SWD2YKL018W RPA49Q01080 415 aaPredicted RBP3.5□□□□□ -1.85
SWD2YKL018W RSM23Q01163 450 aa3.5□□□□□ -1.85
SWD2YKL018W ARX1Q03862 593 aaKnown RBP3.5□□□□□ -1.85
SWD2YKL018W ROY1Q04847 553 aa3.5□□□□□ -1.85
SWD2YKL018W RSF1Q05043 376 aa3.5□□□□□ -1.85
SWD2YKL018W RTT103Q05543 409 aa3.5□□□□□ -1.85
SWD2YKL018W VTA1Q06263 330 aa3.5□□□□□ -1.85
SWD2YKL018W YDL218WQ07629 317 aa3.5□□□□□ -1.85
SWD2YKL018W RTT109Q07794 436 aa3.5□□□□□ -1.85
SWD2YKL018W CDC45Q08032 650 aa3.5□□□□□ -1.85
SWD2YKL018W PAR32Q12515 295 aaKnown RBP3.5□□□□□ -1.85
SWD2YKL018W YDL007C-AQ2V2Q0 85 aa3.5□□□□□ -1.85
SWD2YKL018W SWR1Q05471 1514 aa3.49□□□□□ -1.85
SWD2YKL018W YML002WP0CF17 737 aa3.49□□□□□ -1.85
SWD2YKL018W BAR1P12630 587 aa3.49□□□□□ -1.85
SWD2YKL018W APE1P14904 514 aa3.49□□□□□ -1.85
SWD2YKL018W CDC23P16522 626 aa3.49□□□□□ -1.85
SWD2YKL018W SUI2P20459 304 aaKnown RBP3.49□□□□□ -1.85
SWD2YKL018W MNE1P24720 663 aa3.49□□□□□ -1.85
SWD2YKL018W MDL1P33310 695 aa3.49□□□□□ -1.85
SWD2YKL018W HCS1P34243 683 aa3.49□□□□□ -1.85
SWD2YKL018W PES4P39684 611 aa3.49□□□□□ -1.85
SWD2YKL018W RTS2P40962 232 aa3.49□□□□□ -1.85
SWD2YKL018W KAP120Q02932 1032 aa3.49□□□□□ -1.85
SWD2YKL018W FMP45Q07651 309 aa3.49□□□□□ -1.85
SWD2YKL018W PLP2Q12017 286 aa3.49□□□□□ -1.85
SWD2YKL018W BSC1Q12140 328 aa3.49□□□□□ -1.85
SWD2YKL018W PDH1Q12428 516 aaKnown RBP3.49□□□□□ -1.85
SWD2YKL018W KOG1P38873 1557 aa3.49□□□□□ -1.85
SWD2YKL018W QCR6P00127 147 aa3.48□□□□□ -1.85
SWD2YKL018W CLB2P24869 491 aa3.48□□□□□ -1.85
SWD2YKL018W BUD5P25300 642 aaPredicted RBP3.48□□□□□ -1.85
SWD2YKL018W BUD14P27637 709 aa3.48□□□□□ -1.85
SWD2YKL018W GAC1P28006 793 aa3.48□□□□□ -1.85
SWD2YKL018W URA7P28274 579 aaKnown RBP3.48□□□□□ -1.85
SWD2YKL018W HXT3P32466 567 aaKnown RBP3.48□□□□□ -1.85
SWD2YKL018W RIM2P38127 377 aa3.48□□□□□ -1.85
SWD2YKL018W RXT2P38255 430 aa3.48□□□□□ -1.85
SWD2YKL018W RRP3P38712 501 aaKnown RBP3.48□□□□□ -1.85
SWD2YKL018W GDI1P39958 451 aaKnown RBP3.48□□□□□ -1.85
SWD2YKL018W MEP1P40260 492 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms