RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C RTS2P40962 232 aa1.52□□□□□ -2.17
VPS55YJR044C FYV8P46949 817 aaKnown RBP1.52□□□□□ -2.17
VPS55YJR044C RPS7BP48164 190 aaKnown RBP1.52□□□□□ -2.17
VPS55YJR044C OCA1P50946 238 aaPredicted RBP1.52□□□□□ -2.17
VPS55YJR044C YGR127WP53275 312 aa1.52□□□□□ -2.17
VPS55YJR044C IPI3P53877 555 aa1.52□□□□□ -2.17
VPS55YJR044C EOS1P53938 366 aa1.52□□□□□ -2.17
VPS55YJR044C ADA2Q02336 434 aa1.52□□□□□ -2.17
VPS55YJR044C PFA5Q03289 374 aa1.52□□□□□ -2.17
VPS55YJR044C RSF1Q05043 376 aa1.52□□□□□ -2.17
VPS55YJR044C TFC6Q06339 672 aa1.52□□□□□ -2.17
VPS55YJR044C LUC7Q07508 261 aaPredicted RBP1.52□□□□□ -2.17
VPS55YJR044C YEH1Q07804 573 aa1.52□□□□□ -2.17
VPS55YJR044C PSK2Q08217 1101 aa1.52□□□□□ -2.17
VPS55YJR044C DCI1Q08558 271 aa1.52□□□□□ -2.17
VPS55YJR044C VPS54Q12071 889 aa1.52□□□□□ -2.17
VPS55YJR044C ATG29Q12092 213 aa1.52□□□□□ -2.17
VPS55YJR044C YLR049CQ12110 428 aa1.52□□□□□ -2.17
VPS55YJR044C BAG7Q12128 409 aa1.52□□□□□ -2.17
VPS55YJR044C AVL9Q12500 764 aa1.52□□□□□ -2.17
VPS55YJR044C CTF3Q12748 733 aa1.52□□□□□ -2.17
VPS55YJR044C SGS1P35187 1447 aa1.51□□□□□ -2.17
VPS55YJR044C YLR278CQ05854 1341 aa1.51□□□□□ -2.17
VPS55YJR044C MF(ALPHA)1P01149 165 aa1.51□□□□□ -2.17
VPS55YJR044C RPL6BP05739 176 aaKnown RBP1.51□□□□□ -2.17
VPS55YJR044C PDE2P06776 526 aa1.51□□□□□ -2.17
VPS55YJR044C ARD1P07347 238 aaPredicted RBP1.51□□□□□ -2.17
VPS55YJR044C PET111P08468 800 aa1.51□□□□□ -2.17
VPS55YJR044C MRS3P10566 314 aa1.51□□□□□ -2.17
VPS55YJR044C NAT1P12945 854 aaKnown RBP1.51□□□□□ -2.17
VPS55YJR044C KRR1P25586 316 aaPredicted RBP1.51□□□□□ -2.17
VPS55YJR044C ADK2P26364 225 aa1.51□□□□□ -2.17
VPS55YJR044C HCS1P34243 683 aa1.51□□□□□ -2.17
VPS55YJR044C CMC1P36064 111 aa1.51□□□□□ -2.17
VPS55YJR044C GEX2P36173 615 aa1.51□□□□□ -2.17
VPS55YJR044C ICS2P38284 255 aa1.51□□□□□ -2.17
VPS55YJR044C NTC20P38302 140 aaPredicted RBP1.51□□□□□ -2.17
VPS55YJR044C WSS1P38838 269 aa1.51□□□□□ -2.17
VPS55YJR044C SMF1P38925 575 aa1.51□□□□□ -2.17
VPS55YJR044C LSM5P40089 93 aaKnown RBP1.51□□□□□ -2.17
VPS55YJR044C YIR014WP40570 242 aa1.51□□□□□ -2.17
VPS55YJR044C BUD27P43573 796 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
VPS55YJR044C YPI1P43587 155 aa1.51□□□□□ -2.17
VPS55YJR044C STR3P53101 465 aaKnown RBP1.51□□□□□ -2.17
VPS55YJR044C YTP1P53584 459 aa1.51□□□□□ -2.17
VPS55YJR044C IST1P53843 298 aaPredicted RBP1.51□□□□□ -2.17
VPS55YJR044C RPL6AQ02326 176 aaKnown RBP1.51□□□□□ -2.17
VPS55YJR044C OAZ1Q02803 292 aa1.51□□□□□ -2.17
VPS55YJR044C YMR111CQ04461 462 aaPredicted RBP1.51□□□□□ -2.17
VPS55YJR044C DPB4Q04603 196 aaKnown RBP1.51□□□□□ -2.17
VPS55YJR044C YDR286CQ05530 114 aa1.51□□□□□ -2.17
VPS55YJR044C VTA1Q06263 330 aa1.51□□□□□ -2.17
VPS55YJR044C YPT6Q99260 215 aa1.51□□□□□ -2.17
VPS55YJR044C VMA2P16140 517 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C SRP54P20424 541 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C ADH7P25377 361 aa1.5□□□□□ -2.17
VPS55YJR044C IMG1P25626 169 aa1.5□□□□□ -2.17
VPS55YJR044C LOS1P33418 1100 aaPredicted RBP1.5□□□□□ -2.17
VPS55YJR044C NIP100P33420 868 aa1.5□□□□□ -2.17
VPS55YJR044C PMT1P33775 817 aa1.5□□□□□ -2.17
VPS55YJR044C MTC6P38849 526 aa1.5□□□□□ -2.17
VPS55YJR044C YEL057CP39983 233 aa1.5□□□□□ -2.17
VPS55YJR044C FMP10P40098 244 aa1.5□□□□□ -2.17
VPS55YJR044C MET18P40469 1032 aa1.5□□□□□ -2.17
VPS55YJR044C IAH1P41734 238 aa1.5□□□□□ -2.17
VPS55YJR044C HXT14P42833 540 aa1.5□□□□□ -2.17
VPS55YJR044C FAR3P46671 204 aa1.5□□□□□ -2.17
VPS55YJR044C CTK2P46962 323 aa1.5□□□□□ -2.17
VPS55YJR044C DPB11P47027 764 aaPredicted RBP1.5□□□□□ -2.17
VPS55YJR044C PET130P47065 347 aa1.5□□□□□ -2.17
VPS55YJR044C GPI8P49018 411 aa1.5□□□□□ -2.17
VPS55YJR044C IMD4P50094 524 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C YGL138CP53122 345 aa1.5□□□□□ -2.17
VPS55YJR044C TWF1P53250 332 aa1.5□□□□□ -2.17
VPS55YJR044C PIL1P53252 339 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C CAF130P53280 1122 aaPredicted RBP1.5□□□□□ -2.17
VPS55YJR044C INN1P53901 409 aa1.5□□□□□ -2.17
VPS55YJR044C YVH1Q02256 364 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C KAP120Q02932 1032 aa1.5□□□□□ -2.17
VPS55YJR044C HOT1Q03213 719 aa1.5□□□□□ -2.17
VPS55YJR044C ARP10Q04549 284 aa1.5□□□□□ -2.17
VPS55YJR044C ROY1Q04847 553 aa1.5□□□□□ -2.17
VPS55YJR044C YLR456WQ06199 204 aa1.5□□□□□ -2.17
VPS55YJR044C FMP45Q07651 309 aa1.5□□□□□ -2.17
VPS55YJR044C CDC45Q08032 650 aa1.5□□□□□ -2.17
VPS55YJR044C PGC1Q08959 321 aa1.5□□□□□ -2.17
VPS55YJR044C APL4Q12028 832 aa1.5□□□□□ -2.17
VPS55YJR044C SPE3Q12074 293 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C LEU9Q12166 604 aaKnown RBP1.5□□□□□ -2.17
VPS55YJR044C NFI1Q12216 726 aa1.5□□□□□ -2.17
VPS55YJR044C YDR061WQ12298 539 aa1.5□□□□□ -2.17
VPS55YJR044C GPM3Q12326 303 aa1.5□□□□□ -2.17
VPS55YJR044C FRE6Q12473 712 aa1.5□□□□□ -2.17
VPS55YJR044C KAR3P17119 729 aa1.49□□□□□ -2.17
VPS55YJR044C TKL1P23254 680 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C CPR2P23285 205 aa1.49□□□□□ -2.17
VPS55YJR044C GRR1P24814 1151 aa1.49□□□□□ -2.17
VPS55YJR044C CLB2P24869 491 aa1.49□□□□□ -2.17
VPS55YJR044C PHO84P25297 587 aaKnown RBP1.49□□□□□ -2.17
VPS55YJR044C BOS1P25385 244 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms