RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W YBR241CP38142 488 aa10.96□□□□□ -0.65
SIM1YIL123W UTP18P40362 594 aaPredicted RBP10.96□□□□□ -0.65
SIM1YIL123W SNL1P40548 159 aa10.96□□□□□ -0.65
SIM1YIL123W UPF3P48412 387 aaKnown RBP10.96□□□□□ -0.65
SIM1YIL123W COG7P53195 279 aa10.96□□□□□ -0.65
SIM1YIL123W IDP3P53982 420 aaKnown RBP10.96□□□□□ -0.65
SIM1YIL123W IRC15Q02733 499 aa10.96□□□□□ -0.65
SIM1YIL123W RAD33Q04231 177 aa10.96□□□□□ -0.65
SIM1YIL123W THP2O13539 261 aaKnown RBP10.95□□□□□ -0.66
SIM1YIL123W PRT1P06103 763 aaKnown RBP10.95□□□□□ -0.66
SIM1YIL123W DST1P07273 309 aa10.95□□□□□ -0.66
SIM1YIL123W SPB1P25582 841 aaPredicted RBP10.95□□□□□ -0.66
SIM1YIL123W RSC6P25632 483 aa10.95□□□□□ -0.66
SIM1YIL123W GMH1P36125 273 aa10.95□□□□□ -0.66
SIM1YIL123W RPF2P36160 344 aaKnown RBP10.95□□□□□ -0.66
SIM1YIL123W SOL2P37262 315 aa10.95□□□□□ -0.66
SIM1YIL123W MED6P38782 295 aa10.95□□□□□ -0.66
SIM1YIL123W FAA2P39518 744 aa10.95□□□□□ -0.66
SIM1YIL123W SPF1P39986 1215 aaKnown RBP10.95□□□□□ -0.66
SIM1YIL123W OYE3P41816 400 aaPredicted RBP10.95□□□□□ -0.66
SIM1YIL123W MPS2P53159 387 aa10.95□□□□□ -0.66
SIM1YIL123W MPS1P54199 764 aa10.95□□□□□ -0.66
SIM1YIL123W YHC1Q05900 231 aaKnown RBP10.95□□□□□ -0.66
SIM1YIL123W YDR056CQ12025 205 aa10.95□□□□□ -0.66
SIM1YIL123W MHT1Q12525 324 aa10.95□□□□□ -0.66
SIM1YIL123W RPS9AO13516 197 aaKnown RBP10.94□□□□□ -0.66
SIM1YIL123W MSF1P08425 469 aa10.94□□□□□ -0.66
SIM1YIL123W MSB1P21339 1137 aaKnown RBP10.94□□□□□ -0.66
SIM1YIL123W AAR2P32357 355 aaPredicted RBP10.94□□□□□ -0.66
SIM1YIL123W YME2P32843 850 aa10.94□□□□□ -0.66
SIM1YIL123W YHR218WP38899 603 aa10.94□□□□□ -0.66
SIM1YIL123W SER33P40510 469 aa10.94□□□□□ -0.66
SIM1YIL123W MDM34P53083 459 aa10.94□□□□□ -0.66
SIM1YIL123W YGR015CP53208 328 aa10.94□□□□□ -0.66
SIM1YIL123W DSL1P53847 754 aa10.94□□□□□ -0.66
SIM1YIL123W SKI8Q02793 397 aaPredicted RBP10.94□□□□□ -0.66
SIM1YIL123W YHM2Q04013 314 aa10.94□□□□□ -0.66
SIM1YIL123W GRS2Q06817 618 aa10.94□□□□□ -0.66
SIM1YIL123W PSY3Q12318 242 aa10.94□□□□□ -0.66
SIM1YIL123W YCL012CQ8J0M4 134 aa10.94□□□□□ -0.66
SIM1YIL123W CBP2P03874 630 aaPredicted RBP10.93□□□□□ -0.66
SIM1YIL123W ARG81P05085 880 aa10.93□□□□□ -0.66
SIM1YIL123W RAP1P11938 827 aa10.93□□□□□ -0.66
SIM1YIL123W ATP11P32453 318 aa10.93□□□□□ -0.66
SIM1YIL123W YCR087C-AP37263 153 aa10.93□□□□□ -0.66
SIM1YIL123W VHR1P40522 640 aa10.93□□□□□ -0.66
SIM1YIL123W MEP2P41948 499 aa10.93□□□□□ -0.66
SIM1YIL123W AGP3P43548 558 aa10.93□□□□□ -0.66
SIM1YIL123W YFR018CP43599 363 aa10.93□□□□□ -0.66
SIM1YIL123W YJR149WP47177 404 aa10.93□□□□□ -0.66
SIM1YIL123W YNL260CP53846 198 aa10.93□□□□□ -0.66
SIM1YIL123W YNL095CP53932 642 aa10.93□□□□□ -0.66
SIM1YIL123W TGL2P54857 326 aa10.93□□□□□ -0.66
SIM1YIL123W YPL245WQ12179 454 aaKnown RBP10.93□□□□□ -0.66
SIM1YIL123W SUI3P09064 285 aaKnown RBP10.92□□□□□ -0.66
SIM1YIL123W ATR1P13090 542 aa10.92□□□□□ -0.66
SIM1YIL123W CLN2P20438 545 aa10.92□□□□□ -0.66
SIM1YIL123W BCK2P33306 851 aa10.92□□□□□ -0.66
SIM1YIL123W PDS1P40316 373 aaPredicted RBP10.92□□□□□ -0.66
SIM1YIL123W GAB1P41733 394 aa10.92□□□□□ -0.66
SIM1YIL123W KEL2P50090 882 aa10.92□□□□□ -0.66
SIM1YIL123W SFB2P53953 876 aa10.92□□□□□ -0.66
SIM1YIL123W ARX1Q03862 593 aaKnown RBP10.92□□□□□ -0.66
SIM1YIL123W YPR097WQ06839 1073 aa10.92□□□□□ -0.66
SIM1YIL123W YOR342CQ12182 319 aa10.92□□□□□ -0.66
SIM1YIL123W MPD2Q99316 277 aa10.92□□□□□ -0.66
SIM1YIL123W RAS2P01120 322 aaKnown RBP10.92□□□□□ -0.66
SIM1YIL123W SNF4P12904 322 aa10.92□□□□□ -0.66
SIM1YIL123W YSR3P23501 404 aa10.92□□□□□ -0.66
SIM1YIL123W YBR071WP38243 211 aa10.92□□□□□ -0.66
SIM1YIL123W RGI1P40043 161 aaPredicted RBP10.92□□□□□ -0.66
SIM1YIL123W YJR030CP47101 745 aa10.92□□□□□ -0.66
SIM1YIL123W ZRG17P53735 605 aa10.92□□□□□ -0.66
SIM1YIL123W CAF120P53836 1060 aa10.92□□□□□ -0.66
SIM1YIL123W UGO1Q03327 502 aa10.92□□□□□ -0.66
SIM1YIL123W RPC11Q04307 110 aaPredicted RBP10.92□□□□□ -0.66
SIM1YIL123W RPN6Q12377 434 aa10.92□□□□□ -0.66
SIM1YIL123W FUM1P08417 488 aaKnown RBP10.91□□□□□ -0.66
SIM1YIL123W SGV1P23293 657 aaKnown RBP10.91□□□□□ -0.66
SIM1YIL123W CLB3P24870 427 aa10.91□□□□□ -0.66
SIM1YIL123W GBP2P25555 427 aaKnown RBP RIP-Chip data10.91□□□□□ -0.66not detected
SIM1YIL123W YHL012WP38709 493 aa10.91□□□□□ -0.66
SIM1YIL123W MRK1P50873 501 aa10.91□□□□□ -0.66
SIM1YIL123W RMR1P53060 241 aa10.91□□□□□ -0.66
SIM1YIL123W MTO1P53070 669 aa10.91□□□□□ -0.66
SIM1YIL123W EMI1Q04406 187 aa10.91□□□□□ -0.66
SIM1YIL123W GET4Q12125 312 aa10.91□□□□□ -0.66
SIM1YIL123W SRN2Q99176 213 aa10.91□□□□□ -0.66
SIM1YIL123W CMK2P22517 447 aa10.9□□□□□ -0.66
SIM1YIL123W PUP3P25451 205 aaKnown RBP10.9□□□□□ -0.66
SIM1YIL123W DMC1P25453 334 aa10.9□□□□□ -0.66
SIM1YIL123W RPT5P33297 434 aaKnown RBP10.9□□□□□ -0.66
SIM1YIL123W MDJ1P35191 511 aa10.9□□□□□ -0.66
SIM1YIL123W GIC1P38785 314 aa10.9□□□□□ -0.66
SIM1YIL123W YHR127WP38833 243 aaKnown RBP10.9□□□□□ -0.66
SIM1YIL123W TDA11P38854 504 aa10.9□□□□□ -0.66
SIM1YIL123W LSM5P40089 93 aaKnown RBP10.9□□□□□ -0.66
SIM1YIL123W MET12P46151 657 aa10.9□□□□□ -0.66
SIM1YIL123W BNA3P47039 444 aaKnown RBP10.9□□□□□ -0.66
SIM1YIL123W AIM22P47051 409 aa10.9□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms