RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	RPL19A	P0CX82	189 aa	Known RBP	3.15	□□□□□ -1.91
CKA1	YIL035C	RPL19B	P0CX83	189 aa	Predicted RBP	3.15	□□□□□ -1.91
CKA1	YIL035C	FUN19	P28003	413 aa	Predicted RBP	3.15	□□□□□ -1.91
CKA1	YIL035C	CIN4	P39110	191 aa		3.15	□□□□□ -1.91
CKA1	YIL035C	YML037C	Q03703	340 aa		3.15	□□□□□ -1.91
CKA1	YIL035C	BSC6	Q08280	497 aa		3.15	□□□□□ -1.91
CKA1	YIL035C	SKM1	Q12469	655 aa		3.15	□□□□□ -1.91
CKA1	YIL035C	SUI2	P20459	304 aa	Known RBP	3.14	□□□□□ -1.91
CKA1	YIL035C	PRE8	P23639	250 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	YIH1	P25637	258 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	UBP11	P36026	717 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	IRC15	Q02733	499 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	BUD22	Q04347	519 aa	Known RBP	3.14	□□□□□ -1.91
CKA1	YIL035C	VPS74	Q06385	345 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	PHO92	Q06390	306 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	SSP2	Q08646	371 aa		3.14	□□□□□ -1.91
CKA1	YIL035C	HSH49	Q99181	213 aa	Predicted RBP	3.14	□□□□□ -1.91
CKA1	YIL035C	POL4	P25615	582 aa		3.13	□□□□□ -1.91
CKA1	YIL035C	UTR4	P32626	227 aa		3.13	□□□□□ -1.91
CKA1	YIL035C	VPS24	P36095	224 aa	Known RBP	3.13	□□□□□ -1.91
CKA1	YIL035C	GWT1	P47026	490 aa		3.13	□□□□□ -1.91
CKA1	YIL035C	LCL3	P53153	274 aa		3.13	□□□□□ -1.91
CKA1	YIL035C	YOR387C	Q08910	206 aa		3.13	□□□□□ -1.91
CKA1	YIL035C	LSP1	Q12230	341 aa	Known RBP	3.13	□□□□□ -1.91
CKA1	YIL035C	SGS1	P35187	1447 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	MRP13	P12686	339 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	NAM9	P27929	486 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	YEL045C	P32616	141 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	FUI1	P38196	639 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	CCT6	P39079	546 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	YKU80	Q04437	629 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	COQ9	Q05779	260 aa		3.12	□□□□□ -1.91
CKA1	YIL035C	FMP40	Q08968	688 aa	Predicted RBP	3.12	□□□□□ -1.91
CKA1	YIL035C	RRP12	Q12754	1228 aa	Known RBP	3.12	□□□□□ -1.91
CKA1	YIL035C	LPD1	P09624	499 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	SPT15	P13393	240 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	CPR1	P14832	162 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	ART10	P18634	518 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	YCK1	P23291	538 aa		3.11	□□□□□ -1.91
CKA1	YIL035C	PWP2	P25635	923 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	YIM1	P28625	365 aa		3.11	□□□□□ -1.91
CKA1	YIL035C	CHS3	P29465	1165 aa		3.11	□□□□□ -1.91
CKA1	YIL035C	RRT2	P38332	387 aa		3.11	□□□□□ -1.91
CKA1	YIL035C	AFG3	P39925	761 aa		3.11	□□□□□ -1.91
CKA1	YIL035C	TIF4631	P39935	952 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	VMS1	Q04311	632 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	HEL2	Q05580	639 aa	Known RBP	3.11	□□□□□ -1.91
CKA1	YIL035C	ELO2	P25358	347 aa		3.1	□□□□□ -1.91
CKA1	YIL035C	GPI1	P53306	609 aa		3.1	□□□□□ -1.91
CKA1	YIL035C	VPS72	Q03388	795 aa		3.1	□□□□□ -1.91
CKA1	YIL035C	THP1	Q08231	455 aa		3.1	□□□□□ -1.91
CKA1	YIL035C	ERV2	Q12284	196 aa		3.1	□□□□□ -1.91
CKA1	YIL035C	EXO70	P19658	623 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	YME1	P32795	747 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	MSN2	P33748	704 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	SHP1	P34223	423 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	DUG2	P38149	878 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	TCM62	P38228	572 aa	Known RBP	3.09	□□□□□ -1.91
CKA1	YIL035C	PTH1	P38876	190 aa	Known RBP	3.09	□□□□□ -1.91
CKA1	YIL035C	YIL067C	P40514	678 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	LYS14	P40971	790 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	AIM22	P47051	409 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	ARK1	P53974	638 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	RPC11	Q04307	110 aa	Predicted RBP	3.09	□□□□□ -1.91
CKA1	YIL035C	RBS1	Q05672	457 aa	Known RBP	3.09	□□□□□ -1.91
CKA1	YIL035C	BUD21	Q08492	214 aa	Predicted RBP	3.09	□□□□□ -1.91
CKA1	YIL035C	CFT2	Q12102	859 aa	Predicted RBP	3.09	□□□□□ -1.91
CKA1	YIL035C	TMS1	Q12116	473 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	RKM5	Q12367	367 aa		3.09	□□□□□ -1.91
CKA1	YIL035C	HIP1	P06775	603 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	CHS1	P08004	1131 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	DEG1	P31115	442 aa	Known RBP	3.08	□□□□□ -1.92
CKA1	YIL035C	MRP4	P32902	394 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	YBL059W	P34224	193 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	BNA4	P38169	460 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	MTC6	P38849	526 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
CKA1	YIL035C	ELP2	P42935	788 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	ALK1	P43633	760 aa	Known RBP	3.08	□□□□□ -1.92
CKA1	YIL035C	BTN2	P53286	410 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	MEP3	P53390	489 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	TOF2	Q02208	771 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	ELP3	Q02908	557 aa	Known RBP	3.08	□□□□□ -1.92
CKA1	YIL035C	NGL3	Q03210	505 aa		3.08	□□□□□ -1.92
CKA1	YIL035C	TMC1	Q08422	150 aa	Predicted RBP	3.08	□□□□□ -1.92
CKA1	YIL035C	KEL3	Q08979	651 aa	Predicted RBP	3.08	□□□□□ -1.92
CKA1	YIL035C	HXT1	P32465	570 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	YBL029W	P38201	376 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	NDT80	P38830	627 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	FAU1	P40099	211 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	GCD10	P41814	478 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	YGR210C	P42942	411 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	IPI3	P53877	555 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	PIR3	Q03180	325 aa		3.07	□□□□□ -1.92
CKA1	YIL035C	CDC16	P09798	840 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	HEM15	P16622	393 aa		3.06	□□□□□ -1.92
CKA1	YIL035C	EST1	P17214	699 aa	Predicted RBP	3.06	□□□□□ -1.92
CKA1	YIL035C	GLK1	P17709	500 aa	Known RBP	3.06	□□□□□ -1.92
CKA1	YIL035C	ISY1	P21374	235 aa	Predicted RBP	3.06	□□□□□ -1.92
CKA1	YIL035C	DPB3	P27344	201 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms