RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W YGL242CP53066 181 aa2.18□□□□□ -2.06
URM1YIL008W LCL3P53153 274 aa2.18□□□□□ -2.06
URM1YIL008W DRN1P53255 507 aaKnown RBP2.18□□□□□ -2.06
URM1YIL008W IRC15Q02733 499 aa2.18□□□□□ -2.06
URM1YIL008W IVY1Q04934 453 aa2.18□□□□□ -2.06
URM1YIL008W VPS74Q06385 345 aa2.18□□□□□ -2.06
URM1YIL008W PEP4P07267 405 aaKnown RBP2.17□□□□□ -2.06
URM1YIL008W CDC16P09798 840 aa2.17□□□□□ -2.06
URM1YIL008W MRP13P12686 339 aa2.17□□□□□ -2.06
URM1YIL008W REV1P12689 985 aa2.17□□□□□ -2.06
URM1YIL008W PMR1P13586 950 aa2.17□□□□□ -2.06
URM1YIL008W EXO70P19658 623 aa2.17□□□□□ -2.06
URM1YIL008W SSH4P32343 579 aa2.17□□□□□ -2.06
URM1YIL008W TIF3P34167 436 aaKnown RBP2.17□□□□□ -2.06
URM1YIL008W SHP1P34223 423 aa2.17□□□□□ -2.06
URM1YIL008W DUG2P38149 878 aa2.17□□□□□ -2.06
URM1YIL008W HAT2P39984 401 aa2.17□□□□□ -2.06
URM1YIL008W MKT1P40850 830 aaKnown RBP2.17□□□□□ -2.06
URM1YIL008W DUO1P53168 247 aaKnown RBP2.17□□□□□ -2.06
URM1YIL008W HNT3Q08702 217 aa2.17□□□□□ -2.06
URM1YIL008W HUA2Q12134 243 aa2.17□□□□□ -2.06
URM1YIL008W LSP1Q12230 341 aaKnown RBP2.17□□□□□ -2.06
URM1YIL008W NOP58Q12499 511 aaKnown RBP2.17□□□□□ -2.06
URM1YIL008W HSH49Q99181 213 aaPredicted RBP2.17□□□□□ -2.06
URM1YIL008W LPD1P09624 499 aaKnown RBP2.16□□□□□ -2.06
URM1YIL008W PUT3P25502 979 aaPredicted RBP2.16□□□□□ -2.06
URM1YIL008W MCM10P32354 571 aa2.16□□□□□ -2.06
URM1YIL008W SWH1P35845 1188 aa2.16□□□□□ -2.06
URM1YIL008W CCT6P39079 546 aa2.16□□□□□ -2.06
URM1YIL008W YEL068CP39977 110 aa2.16□□□□□ -2.06
URM1YIL008W ALG5P40350 334 aa2.16□□□□□ -2.06
URM1YIL008W ALK1P43633 760 aaKnown RBP2.16□□□□□ -2.06
URM1YIL008W SHE10P53075 577 aa2.16□□□□□ -2.06
URM1YIL008W MSO1P53604 210 aaKnown RBP2.16□□□□□ -2.06
URM1YIL008W WSC2P53832 503 aa2.16□□□□□ -2.06
URM1YIL008W IPI3P53877 555 aa2.16□□□□□ -2.06
URM1YIL008W TOF2Q02208 771 aa2.16□□□□□ -2.06
URM1YIL008W PHO92Q06390 306 aa2.16□□□□□ -2.06
URM1YIL008W YEH1Q07804 573 aa2.16□□□□□ -2.06
URM1YIL008W THP1Q08231 455 aa2.16□□□□□ -2.06
URM1YIL008W NMD4Q12129 218 aa2.16□□□□□ -2.06
URM1YIL008W CTF3Q12748 733 aa2.16□□□□□ -2.06
URM1YIL008W YCL021W-AQ96VH3 125 aa2.16□□□□□ -2.06
URM1YIL008W SGS1P35187 1447 aa2.16□□□□□ -2.06
URM1YIL008W EST1P17214 699 aaPredicted RBP2.15□□□□□ -2.07
URM1YIL008W SEF1P34228 1148 aa2.15□□□□□ -2.07
URM1YIL008W MUD2P36084 527 aaKnown RBP2.15□□□□□ -2.07
URM1YIL008W BNA4P38169 460 aa2.15□□□□□ -2.07
URM1YIL008W TCM62P38228 572 aaKnown RBP2.15□□□□□ -2.07
URM1YIL008W FLC2P39719 783 aa2.15□□□□□ -2.07
URM1YIL008W TIF4631P39935 952 aaKnown RBP2.15□□□□□ -2.07
URM1YIL008W ELP2P42935 788 aa2.15□□□□□ -2.07
URM1YIL008W VID30P53076 958 aa2.15□□□□□ -2.07
URM1YIL008W GPI1P53306 609 aa2.15□□□□□ -2.07
URM1YIL008W NGL3Q03210 505 aa2.15□□□□□ -2.07
URM1YIL008W COQ9Q05779 260 aa2.15□□□□□ -2.07
URM1YIL008W YPT6Q99260 215 aa2.15□□□□□ -2.07
URM1YIL008W GLK1P17709 500 aaKnown RBP2.14□□□□□ -2.07
URM1YIL008W RNA14P25298 677 aaKnown RBP2.14□□□□□ -2.07
URM1YIL008W ELO2P25358 347 aa2.14□□□□□ -2.07
URM1YIL008W FUN19P28003 413 aaPredicted RBP2.14□□□□□ -2.07
URM1YIL008W PAP1P29468 568 aaKnown RBP2.14□□□□□ -2.07
URM1YIL008W MSN2P33748 704 aa2.14□□□□□ -2.07
URM1YIL008W MSR1P38714 643 aa2.14□□□□□ -2.07
URM1YIL008W GWT1P47026 490 aa2.14□□□□□ -2.07
URM1YIL008W IMD4P50094 524 aaKnown RBP2.14□□□□□ -2.07
URM1YIL008W RBS1Q05672 457 aaKnown RBP2.14□□□□□ -2.07
URM1YIL008W YER078W-AQ3E7A2 54 aa2.14□□□□□ -2.07
URM1YIL008W SEC53P07283 254 aaKnown RBP2.13□□□□□ -2.07
URM1YIL008W PRP2P20095 876 aaPredicted RBP2.13□□□□□ -2.07
URM1YIL008W LDB16P25587 256 aa2.13□□□□□ -2.07
URM1YIL008W TCD2P36101 447 aaKnown RBP2.13□□□□□ -2.07
URM1YIL008W MRPL4P36517 319 aa2.13□□□□□ -2.07
URM1YIL008W AIM22P47051 409 aa2.13□□□□□ -2.07
URM1YIL008W RBG2P53295 368 aaKnown RBP2.13□□□□□ -2.07
URM1YIL008W ZPR1P53303 486 aaKnown RBP2.13□□□□□ -2.07
URM1YIL008W HEF3P53978 1044 aaKnown RBP2.13□□□□□ -2.07
URM1YIL008W ADD37Q03233 198 aa2.13□□□□□ -2.07
URM1YIL008W RPC11Q04307 110 aaPredicted RBP2.13□□□□□ -2.07
URM1YIL008W CFT2Q12102 859 aaPredicted RBP2.13□□□□□ -2.07
URM1YIL008W YJR112W-AQ3E743 109 aa2.13□□□□□ -2.07
URM1YIL008W BRR1Q99177 341 aaPredicted RBP2.13□□□□□ -2.07
URM1YIL008W SEM1O94742 89 aa2.12□□□□□ -2.07
URM1YIL008W CPR1P14832 162 aaKnown RBP2.12□□□□□ -2.07
URM1YIL008W HSC82P15108 705 aaKnown RBP2.12□□□□□ -2.07
URM1YIL008W PAH1P32567 862 aa2.12□□□□□ -2.07
URM1YIL008W MRP4P32902 394 aa2.12□□□□□ -2.07
URM1YIL008W NOP4P37838 685 aaKnown RBP2.12□□□□□ -2.07
URM1YIL008W NOP16P40007 231 aaKnown RBP2.12□□□□□ -2.07
URM1YIL008W FIN1Q03898 291 aa2.12□□□□□ -2.07
URM1YIL008W HEL2Q05580 639 aaKnown RBP2.12□□□□□ -2.07
URM1YIL008W VPS38Q05919 439 aa2.12□□□□□ -2.07
URM1YIL008W YOR387CQ08910 206 aa2.12□□□□□ -2.07
URM1YIL008W KEL3Q08979 651 aaPredicted RBP2.12□□□□□ -2.07
URM1YIL008W RCN2Q12044 265 aa2.12□□□□□ -2.07
URM1YIL008W RLM1Q12224 676 aa2.12□□□□□ -2.07
URM1YIL008W HIP1P06775 603 aa2.11□□□□□ -2.07
URM1YIL008W SPT15P13393 240 aaKnown RBP2.11□□□□□ -2.07
URM1YIL008W PRD1P25375 712 aa2.11□□□□□ -2.07
URM1YIL008W DEG1P31115 442 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms