RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YTA12P40341 825 aa3.82□□□□□ -1.8
PRP18YGR006W YJR154WP47181 346 aa3.82□□□□□ -1.8
PRP18YGR006W SYF1Q04048 859 aaPredicted RBP3.82□□□□□ -1.8
PRP18YGR006W RQC1Q05468 723 aaKnown RBP3.82□□□□□ -1.8
PRP18YGR006W GLO2Q05584 274 aa3.82□□□□□ -1.8
PRP18YGR006W DIC1Q06143 298 aa3.82□□□□□ -1.8
PRP18YGR006W GRS2Q06817 618 aa3.82□□□□□ -1.8
PRP18YGR006W YEH2Q07950 538 aa3.82□□□□□ -1.8
PRP18YGR006W THP1Q08231 455 aa3.82□□□□□ -1.8
PRP18YGR006W BSC1Q12140 328 aa3.82□□□□□ -1.8
PRP18YGR006W YDL007C-AQ2V2Q0 85 aa3.82□□□□□ -1.8
PRP18YGR006W ELO2P25358 347 aa3.81□□□□□ -1.8
PRP18YGR006W ACH1P32316 526 aa3.81□□□□□ -1.8
PRP18YGR006W TRS65P32893 560 aa3.81□□□□□ -1.8
PRP18YGR006W SEC66P33754 206 aa3.81□□□□□ -1.8
PRP18YGR006W SMF1P38925 575 aa3.81□□□□□ -1.8
PRP18YGR006W AZF1P41696 914 aa3.81□□□□□ -1.8
PRP18YGR006W SAD1P43589 448 aa3.81□□□□□ -1.8
PRP18YGR006W AIM22P47051 409 aa3.81□□□□□ -1.8
PRP18YGR006W CAF130P53280 1122 aaPredicted RBP3.81□□□□□ -1.8
PRP18YGR006W BUD32P53323 261 aa3.81□□□□□ -1.8
PRP18YGR006W SAM50P53969 484 aa3.81□□□□□ -1.8
PRP18YGR006W PDS5Q04264 1277 aa3.81□□□□□ -1.8
PRP18YGR006W RTN2Q12443 393 aa3.81□□□□□ -1.8
PRP18YGR006W YML133CQ03099 1374 aa3.8□□□□□ -1.8
PRP18YGR006W YLL067CQ07888 1374 aa3.8□□□□□ -1.8
PRP18YGR006W YLL066CQ99208 1374 aa3.8□□□□□ -1.8
PRP18YGR006W BAR1P12630 587 aa3.8□□□□□ -1.8
PRP18YGR006W FUR1P18562 216 aaKnown RBP3.8□□□□□ -1.8
PRP18YGR006W RPS2P25443 254 aaKnown RBP3.8□□□□□ -1.8
PRP18YGR006W ERG3P32353 365 aa3.8□□□□□ -1.8
PRP18YGR006W ERG1P32476 496 aaKnown RBP3.8□□□□□ -1.8
PRP18YGR006W BNA4P38169 460 aa3.8□□□□□ -1.8
PRP18YGR006W CSM2P40465 213 aa3.8□□□□□ -1.8
PRP18YGR006W HXT14P42833 540 aa3.8□□□□□ -1.8
PRP18YGR006W GUF1P46943 645 aa3.8□□□□□ -1.8
PRP18YGR006W TDA7P53882 636 aaPredicted RBP3.8□□□□□ -1.8
PRP18YGR006W HEF3P53978 1044 aaKnown RBP3.8□□□□□ -1.8
PRP18YGR006W FMP45Q07651 309 aa3.8□□□□□ -1.8
PRP18YGR006W THI20Q08224 551 aa3.8□□□□□ -1.8
PRP18YGR006W PDH1Q12428 516 aaKnown RBP3.8□□□□□ -1.8
PRP18YGR006W RAV1P47104 1357 aa3.79□□□□□ -1.8
PRP18YGR006W RAD52P06778 471 aaKnown RBP3.79□□□□□ -1.8
PRP18YGR006W COR1P07256 457 aa3.79□□□□□ -1.8
PRP18YGR006W RPL31BP0C2H9 113 aaKnown RBP3.79□□□□□ -1.8
PRP18YGR006W PMS1P14242 873 aa3.79□□□□□ -1.8
PRP18YGR006W GLN3P18494 730 aa3.79□□□□□ -1.8
PRP18YGR006W SEC62P21825 274 aa3.79□□□□□ -1.8
PRP18YGR006W PMT1P33775 817 aa3.79□□□□□ -1.8
PRP18YGR006W ECM15P35195 104 aa3.79□□□□□ -1.8
PRP18YGR006W DUG2P38149 878 aa3.79□□□□□ -1.8
PRP18YGR006W TCM62P38228 572 aaKnown RBP3.79□□□□□ -1.8
PRP18YGR006W MBB1P39534 108 aa3.79□□□□□ -1.8
PRP18YGR006W TIF4631P39935 952 aaKnown RBP3.79□□□□□ -1.8
PRP18YGR006W YER130CP39959 443 aa3.79□□□□□ -1.8
PRP18YGR006W YND1P40009 630 aa3.79□□□□□ -1.8
PRP18YGR006W DIM1P41819 318 aaKnown RBP3.79□□□□□ -1.8
PRP18YGR006W CSR2Q12734 1121 aa3.79□□□□□ -1.8
PRP18YGR006W CLB3P24870 427 aa3.78□□□□□ -1.8
PRP18YGR006W NFU1P32860 256 aa3.78□□□□□ -1.8
PRP18YGR006W RIM2P38127 377 aa3.78□□□□□ -1.8
PRP18YGR006W YJL068CP40363 299 aa3.78□□□□□ -1.8
PRP18YGR006W VTC2P43585 828 aa3.78□□□□□ -1.8
PRP18YGR006W DRN1P53255 507 aaKnown RBP3.78□□□□□ -1.8
PRP18YGR006W RRG1Q12167 365 aaPredicted RBP3.78□□□□□ -1.8
PRP18YGR006W SUC2P00724 532 aa3.77□□□□□ -1.81
PRP18YGR006W APE1P14904 514 aa3.77□□□□□ -1.81
PRP18YGR006W CDC23P16522 626 aa3.77□□□□□ -1.81
PRP18YGR006W SGV1P23293 657 aaKnown RBP3.77□□□□□ -1.81
PRP18YGR006W YCR007CP25354 239 aa3.77□□□□□ -1.81
PRP18YGR006W UTR4P32626 227 aa3.77□□□□□ -1.81
PRP18YGR006W MSN2P33748 704 aa3.77□□□□□ -1.81
PRP18YGR006W ZPR1P53303 486 aaKnown RBP3.77□□□□□ -1.81
PRP18YGR006W IVY1Q04934 453 aa3.77□□□□□ -1.81
PRP18YGR006W VTA1Q06263 330 aa3.77□□□□□ -1.81
PRP18YGR006W PGA3Q12746 312 aaKnown RBP3.77□□□□□ -1.81
PRP18YGR006W CLC1P17891 233 aa3.76□□□□□ -1.81
PRP18YGR006W EXO70P19658 623 aa3.76□□□□□ -1.81
PRP18YGR006W OSH3P38713 996 aaKnown RBP3.76□□□□□ -1.81
PRP18YGR006W YJL070CP40361 888 aa3.76□□□□□ -1.81
PRP18YGR006W URB2P47108 1174 aa3.76□□□□□ -1.81
PRP18YGR006W SLG1P54867 378 aa3.76□□□□□ -1.81
PRP18YGR006W SLD5Q03406 294 aa3.76□□□□□ -1.81
PRP18YGR006W GIR2Q03768 265 aaPredicted RBP3.76□□□□□ -1.81
PRP18YGR006W RBA50Q04418 439 aa3.76□□□□□ -1.81
PRP18YGR006W LSP1Q12230 341 aaKnown RBP3.76□□□□□ -1.81
PRP18YGR006W CAR1P00812 333 aaKnown RBP3.75□□□□□ -1.81
PRP18YGR006W RHO2P06781 192 aa3.75□□□□□ -1.81
PRP18YGR006W PPZ1P26570 692 aa3.75□□□□□ -1.81
PRP18YGR006W RAD14P28519 371 aa3.75□□□□□ -1.81
PRP18YGR006W BYE1P36106 594 aa3.75□□□□□ -1.81
PRP18YGR006W RTT107P38850 1070 aa3.75□□□□□ -1.81
PRP18YGR006W GPD2P41911 440 aaKnown RBP3.75□□□□□ -1.81
PRP18YGR006W SCD6P45978 349 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
PRP18YGR006W GPI1P53306 609 aa3.75□□□□□ -1.81
PRP18YGR006W YMR155WQ03795 547 aa3.75□□□□□ -1.81
PRP18YGR006W TAP42Q04372 366 aa3.75□□□□□ -1.81
PRP18YGR006W BNA5Q05979 453 aa3.75□□□□□ -1.81
PRP18YGR006W PHO92Q06390 306 aa3.75□□□□□ -1.81
PRP18YGR006W SPS4P09937 338 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms