RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeast

Gene SCL1, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCL1	YGL011C	YDL007C-A	Q2V2Q0	85 aa		4.6	□□□□□ -1.67
SCL1	YGL011C	BAR1	P12630	587 aa		4.59	□□□□□ -1.67
SCL1	YGL011C	ACH1	P32316	526 aa		4.59	□□□□□ -1.67
SCL1	YGL011C	ERG1	P32476	496 aa	Known RBP	4.59	□□□□□ -1.67
SCL1	YGL011C	SHP1	P34223	423 aa		4.59	□□□□□ -1.67
SCL1	YGL011C	TIF4631	P39935	952 aa	Known RBP	4.59	□□□□□ -1.67
SCL1	YGL011C	ALK1	P43633	760 aa	Known RBP	4.59	□□□□□ -1.67
SCL1	YGL011C	TDA7	P53882	636 aa	Predicted RBP	4.59	□□□□□ -1.67
SCL1	YGL011C	FMP42	Q04991	504 aa		4.59	□□□□□ -1.67
SCL1	YGL011C	RRG1	Q12167	365 aa	Predicted RBP	4.59	□□□□□ -1.67
SCL1	YGL011C	PDH1	Q12428	516 aa	Known RBP	4.59	□□□□□ -1.67
SCL1	YGL011C	ARP6	Q12509	438 aa		4.59	□□□□□ -1.67
SCL1	YGL011C	YOL159C-A	Q3E769	90 aa		4.59	□□□□□ -1.67
SCL1	YGL011C	COR1	P07256	457 aa		4.58	□□□□□ -1.68
SCL1	YGL011C	GLN3	P18494	730 aa		4.58	□□□□□ -1.68
SCL1	YGL011C	FUR1	P18562	216 aa	Known RBP	4.58	□□□□□ -1.68
SCL1	YGL011C	PRP2	P20095	876 aa	Predicted RBP	4.58	□□□□□ -1.68
SCL1	YGL011C	PAP1	P29468	568 aa	Known RBP	4.58	□□□□□ -1.68
SCL1	YGL011C	CMC1	P36064	111 aa		4.58	□□□□□ -1.68
SCL1	YGL011C	KEL1	P38853	1164 aa	Known RBP	4.58	□□□□□ -1.68
SCL1	YGL011C	GPD2	P41911	440 aa	Known RBP	4.58	□□□□□ -1.68
SCL1	YGL011C	YJR154W	P47181	346 aa		4.58	□□□□□ -1.68
SCL1	YGL011C	YMR087W	Q04299	284 aa		4.58	□□□□□ -1.68
SCL1	YGL011C	RBA50	Q04418	439 aa		4.58	□□□□□ -1.68
SCL1	YGL011C	MSN2	P33748	704 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	SEC66	P33754	206 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	ECM15	P35195	104 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	MIC60	P36112	540 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	BNA4	P38169	460 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	TCM62	P38228	572 aa	Known RBP	4.57	□□□□□ -1.68
SCL1	YGL011C	YIR014W	P40570	242 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	HXT14	P42833	540 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	ATG27	P46989	271 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	YGR250C	P53316	781 aa	Known RBP	4.57	□□□□□ -1.68
SCL1	YGL011C	SAM50	P53969	484 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	HEF3	P53978	1044 aa	Known RBP	4.57	□□□□□ -1.68
SCL1	YGL011C	RQC1	Q05468	723 aa	Known RBP	4.57	□□□□□ -1.68
SCL1	YGL011C	YLR281C	Q05863	155 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	THI20	Q08224	551 aa		4.57	□□□□□ -1.68
SCL1	YGL011C	RAV1	P47104	1357 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	RPL31B	P0C2H9	113 aa	Known RBP	4.56	□□□□□ -1.68
SCL1	YGL011C	RPN2	P32565	945 aa	Known RBP	4.56	□□□□□ -1.68
SCL1	YGL011C	NPL6	P32832	435 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	SAS3	P34218	831 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	MBB1	P39534	108 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	ALT2	P52892	507 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	LSC1	P53598	329 aa	Known RBP	4.56	□□□□□ -1.68
SCL1	YGL011C	NUP53	Q03790	475 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	YMR155W	Q03795	547 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	GLO2	Q05584	274 aa		4.56	□□□□□ -1.68
SCL1	YGL011C	APE1	P14904	514 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	NFU1	P32860	256 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	TRS65	P32893	560 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	RKM3	P38222	552 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	LSM5	P40089	93 aa	Known RBP	4.55	□□□□□ -1.68
SCL1	YGL011C	SNM1	P40993	198 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	VTC2	P43585	828 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	SAD1	P43589	448 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	ZPR1	P53303	486 aa	Known RBP	4.55	□□□□□ -1.68
SCL1	YGL011C	SPC19	Q03954	165 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	TAP42	Q04372	366 aa		4.55	□□□□□ -1.68
SCL1	YGL011C	SUC2	P00724	532 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	SEC62	P21825	274 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	PPZ1	P26570	692 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	VPS17	P32913	551 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	BYE1	P36106	594 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	DUG2	P38149	878 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	BZZ1	P38822	633 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SCL1	YGL011C	SLG1	P54867	378 aa		4.54	□□□□□ -1.68
SCL1	YGL011C	RBS1	Q05672	457 aa	Known RBP	4.54	□□□□□ -1.68
SCL1	YGL011C	MES1	P00958	751 aa	Known RBP	4.53	□□□□□ -1.68
SCL1	YGL011C	RPL3	P14126	387 aa	Known RBP	4.53	□□□□□ -1.68
SCL1	YGL011C	CDC23	P16522	626 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	BUD14	P27637	709 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	SEC1	P30619	724 aa	Known RBP	4.53	□□□□□ -1.68
SCL1	YGL011C	ATP11	P32453	318 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	OSH3	P38713	996 aa	Known RBP	4.53	□□□□□ -1.68
SCL1	YGL011C	VPS52	P39904	641 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	RPA49	Q01080	415 aa	Predicted RBP	4.53	□□□□□ -1.68
SCL1	YGL011C	SLD5	Q03406	294 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	IVY1	Q04934	453 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	PHO92	Q06390	306 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	SFI1	Q12369	946 aa		4.53	□□□□□ -1.68
SCL1	YGL011C	CLB3	P24870	427 aa		4.52	□□□□□ -1.69
SCL1	YGL011C	HXT3	P32466	567 aa	Known RBP	4.52	□□□□□ -1.69
SCL1	YGL011C	FRE1	P32791	686 aa		4.52	□□□□□ -1.69
SCL1	YGL011C	RIM2	P38127	377 aa		4.52	□□□□□ -1.69
SCL1	YGL011C	RRP3	P38712	501 aa	Known RBP	4.52	□□□□□ -1.69
SCL1	YGL011C	OTU2	P38747	307 aa	Known RBP	4.52	□□□□□ -1.69
SCL1	YGL011C	YMR147W	P40218	223 aa	Known RBP	4.52	□□□□□ -1.69
SCL1	YGL011C	CSM2	P40465	213 aa		4.52	□□□□□ -1.69
SCL1	YGL011C	YGL108C	P53139	140 aa		4.52	□□□□□ -1.69
SCL1	YGL011C	KTR5	P53966	522 aa	Predicted RBP	4.52	□□□□□ -1.69
SCL1	YGL011C	PPH22	P23595	377 aa		4.51	□□□□□ -1.69
SCL1	YGL011C	YCR007C	P25354	239 aa		4.51	□□□□□ -1.69
SCL1	YGL011C	SPB1	P25582	841 aa	Predicted RBP	4.51	□□□□□ -1.69
SCL1	YGL011C	YJL068C	P40363	299 aa		4.51	□□□□□ -1.69
SCL1	YGL011C	VMA13	P41807	478 aa	Known RBP	4.51	□□□□□ -1.69
SCL1	YGL011C	YGL082W	P53155	381 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms